Cow genome map


           Conread name:
           Emb1-C0005215_D03
        

               Conread position:
               1-275
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               12, 207
               

               Conread position:
               4-266
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 201
               

               Conread position:
               4-266
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               80, 22
               

               Conread position:
               4-269
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               74, 207
               

               Conread position:
               4-273
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               130, 80
               

               Conread position:
               52-266
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               18, 150
               

               Conread position:
               53-264
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 147
               

               Conread position:
               69-275
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 23
               

               Conread position:
               268-458
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               82, 8
               

               Conread position:
               269-448
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               98, 148
               

               Conread position:
               279-419
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               129, 93
               

               Conread position:
               279-426
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 123
               

               Conread position:
               279-427
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 137
               

               Conread position:
               279-432
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               279-433
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               88, 138
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               81, 138
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               89, 122
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               81, 138
               

               Conread position:
               279-457
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 138
               

               Conread position:
               279-479
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               107, 85
               

               Conread position:
               279-485
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 138
               

               Conread position:
               355-620
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               65, 24
               

               Conread position:
               360-620
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               62, 24
               

               Conread position:
               393-620
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               397-602
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               46, 125
               

               Conread position:
               397-616
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               56, 20
               

               Conread position:
               397-618
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 51
               

               Conread position:
               397-618
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               173, 51
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               47, 63
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 58
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               51, 23
               

               Conread position:
               399-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               44, 62
               

               Conread position:
               410-620
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 8
               

               Conread position:
               410-620
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               37, 105
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               159, 36
               

               Conread position:
               414-620
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               31, 70
               

               Conread position:
               415-620
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               150, 81
               

               Conread position:
               422-616
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               157
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               30, 100
               

               Conread position:
               423-618
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               428-620
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 91
               

               Conread position:
               428-620
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 90
               

               Conread position:
               431-620
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               17, 31
               

               Conread position:
               432-620
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               432-620
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               17, 104
               

               Conread position:
               436-620
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               134, 68
               

               Conread position:
               436-620
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               145, 15
               

               Conread position:
               442-620
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               442-620
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               139, 86
               

               Conread position:
               444-620
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               137, 60
               

               Conread position:
               460-620
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               110, 8
               

               Conread position:
               465-620
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 107
               
Show alignments to all cow chromosomes.