Cow genome map
| Conread name: | Emb1-C0005215_D03 |
| Conread position: | 1-300 |
| Cow position: | chr19:30754902-30755217 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 6, 17 |
| Conread position: | 24-270 |
| Cow position: | chr19:35376305-35376570 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 50, 191 |
| Conread position: | 24-274 |
| Cow position: | chr19:32202508-32202763 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 73, 176 |
| Conread position: | 62-270 |
| Cow position: | chr19:17018316-17018526 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 77, 105 |
| Conread position: | 252-462 |
| Cow position: | chr19:5730289-5730495 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 269-448 |
| Cow position: | chr19:28580222-28580046 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 279-448 |
| Cow position: | chr19:33874875-33875040 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 280-399 |
| Cow position: | chr19:4387073-4387192 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 392-618 |
| Cow position: | chr19:56382850-56383067 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 7, 14 |
| Conread position: | 392-620 |
| Cow position: | chr19:7612330-7612551 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 393-616 |
| Cow position: | chr19:24956729-24956518 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 397-613 |
| Cow position: | chr19:54984779-54984990 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 124 |
| Conread position: | 397-619 |
| Cow position: | chr19:21198835-21199066 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 63 |
| Conread position: | 397-619 |
| Cow position: | chr19:22765325-22765550 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 63 |
| Conread position: | 397-620 |
| Cow position: | chr19:6515969-6516197 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 139, 114 |
| Conread position: | 397-620 |
| Cow position: | chr19:8033447-8033676 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 397-620 |
| Cow position: | chr19:20693207-20693427 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 59 |
| Conread position: | 397-620 |
| Cow position: | chr19:33932435-33932218 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 17, 107 |
| Conread position: | 397-620 |
| Cow position: | chr19:34955989-34955763 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 397-620 |
| Cow position: | chr19:35622070-35622289 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 26, 126 |
| Conread position: | 397-620 |
| Cow position: | chr19:38596323-38596550 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 397-620 |
| Cow position: | chr19:46918549-46918780 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 398-618 |
| Cow position: | chr19:39056954-39057172 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 51, 98 |
| Conread position: | 399-620 |
| Cow position: | chr19:11171508-11171288 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 62 |
| Conread position: | 399-620 |
| Cow position: | chr19:16694335-16694112 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 97, 18 |
| Conread position: | 401-620 |
| Cow position: | chr19:17274007-17273799 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 401-620 |
| Cow position: | chr19:53037441-53037222 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 160, 120 |
| Conread position: | 410-620 |
| Cow position: | chr19:14347731-14347943 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 44, 112 |
| Conread position: | 410-620 |
| Cow position: | chr19:39360861-39361073 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 169 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 33, 75 |
| Conread position: | 415-619 |
| Cow position: | chr19:29627648-29627450 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 33, 89 |
| Conread position: | 415-619 |
| Cow position: | chr19:36176472-36176677 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 163 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 166, 125 |
| Conread position: | 416-616 |
| Cow position: | chr19:51185154-51185351 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 416-620 |
| Cow position: | chr19:15887595-15887394 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 32, 47 |
| Conread position: | 422-620 |
| Cow position: | chr19:10093028-10093224 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 429-620 |
| Cow position: | chr19:3621168-3621361 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 430-620 |
| Cow position: | chr19:6881137-6880944 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 430-620 |
| Cow position: | chr19:11565407-11565222 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 151, 19 |
| Conread position: | 436-620 |
| Cow position: | chr19:19919714-19919531 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 448-620 |
| Cow position: | chr19:6531652-6531820 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 133, 8 |
| Conread position: | 461-620 |
| Cow position: | chr19:35762483-35762322 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 462-620 |
| Cow position: | chr19:20984996-20984843 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 468-620 |
| Cow position: | chr19:24137038-24137192 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 469-619 |
| Cow position: | chr19:16621574-16621423 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 113, 18 |
| Conread position: | 477-620 |
| Cow position: | chr19:48960179-48960326 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 529-620 |
| Cow position: | chr19:25807465-25807372 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.