Cow genome map

Conread name: Emb1-C0005215_D03

Conread position: 1-274
Cow position: chr20:13757945-13758232 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 192
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 3-300
Cow position: chr20:37579143-37579456 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 122

Conread position: 4-264
Cow position: chr20:29572499-29572224 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 131

Conread position: 4-265
Cow position: chr20:4799957-4799687 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 22

Conread position: 4-266
Cow position: chr20:8313746-8313471 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 72, 201

Conread position: 4-273
Cow position: chr20:2791662-2791374 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 205

Conread position: 4-277
Cow position: chr20:24516558-24516842 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 134, 56

Conread position: 11-207
Cow position: chr20:3032632-3032831 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 114

Conread position: 269-474
Cow position: chr20:27870619-27870826 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 148

Conread position: 279-407
Cow position: chr20:9520715-9520586 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 124

Conread position: 279-427
Cow position: chr20:29949950-29950095 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 132, 84

Conread position: 279-427
Cow position: chr20:30686997-30687146 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 82, 138

Conread position: 279-448
Cow position: chr20:5536365-5536534 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 138

Conread position: 280-433
Cow position: chr20:17660319-17660169 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 119

Conread position: 283-419
Cow position: chr20:20753377-20753240 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 131, 0

Conread position: 376-620
Cow position: chr20:24391727-24391964 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 73

Conread position: 386-620
Cow position: chr20:17734022-17733790 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 184, 62

Conread position: 393-619
Cow position: chr20:18321039-18320808 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 393-619
Cow position: chr20:25009885-25009656 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 52, 183

Conread position: 393-619
Cow position: chr20:28982457-28982682 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 189, 15

Conread position: 393-620
Cow position: chr20:7550013-7550223 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 393-620
Cow position: chr20:40256727-40256955 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 25, 106

Conread position: 397-616
Cow position: chr20:13269387-13269607 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 58

Conread position: 397-619
Cow position: chr20:12996247-12996027 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 130

Conread position: 397-619
Cow position: chr20:19146632-19146858 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 397-619
Cow position: chr20:19410603-19410381 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 103, 42

Conread position: 397-619
Cow position: chr20:33144791-33144569 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 49, 34

Conread position: 397-619
Cow position: chr20:40127574-40127352 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 45, 145

Conread position: 397-620
Cow position: chr20:6240767-6240537 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 397-620
Cow position: chr20:11614281-11614058 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 46, 183

Conread position: 397-620
Cow position: chr20:12334144-12334359 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 113

Conread position: 397-620
Cow position: chr20:14806646-14806870 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 25, 126

Conread position: 397-620
Cow position: chr20:19328162-19328386 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 167, 109

Conread position: 397-620
Cow position: chr20:19363600-19363381 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 52, 100

Conread position: 397-620
Cow position: chr20:22445874-22445653 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 17, 124

Conread position: 397-620
Cow position: chr20:35958411-35958630 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 167, 43

Conread position: 398-620
Cow position: chr20:15549135-15548916 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 12, 110

Conread position: 401-610
Cow position: chr20:36997480-36997690 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 139
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 410-619
Cow position: chr20:27339842-27340046 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 94, 0

Conread position: 410-620
Cow position: chr20:14572579-14572375 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 13

Conread position: 411-620
Cow position: chr20:7442348-7442143 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 108

Conread position: 411-620
Cow position: chr20:12420845-12420635 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 119

Conread position: 411-620
Cow position: chr20:14735453-14735660 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 170, 108

Conread position: 411-620
Cow position: chr20:14759888-14759676 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 137

Conread position: 412-618
Cow position: chr20:26996311-26996516 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 39

Conread position: 412-620
Cow position: chr20:37200137-37200343 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 149, 36

Conread position: 414-620
Cow position: chr20:40511978-40511774 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 127, 111

Conread position: 415-620
Cow position: chr20:11923459-11923258 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 8

Conread position: 417-620
Cow position: chr20:38768671-38768472 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 32, 103

Conread position: 421-613
Cow position: chr20:14879572-14879764 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 27, 94

Conread position: 421-620
Cow position: chr20:3781641-3781442 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 22, 92

Conread position: 421-620
Cow position: chr20:28296076-28296276 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 22, 86

Conread position: 428-620
Cow position: chr20:33176975-33177174 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 16, 112

Conread position: 434-620
Cow position: chr20:29805862-29805677 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 33

Conread position: 435-620
Cow position: chr20:35907246-35907067 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 129, 84

Conread position: 440-620
Cow position: chr20:13994615-13994798 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 126, 0

Conread position: 442-620
Cow position: chr20:11043688-11043518 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 139, 68

Conread position: 442-620
Cow position: chr20:38415163-38414985 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 139, 77

Conread position: 444-620
Cow position: chr20:9988397-9988572 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 137, 81

Conread position: 449-620
Cow position: chr20:2204849-2204686 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 133, 11

Conread position: 465-620
Cow position: chr20:28831794-28831953 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 65

Conread position: 466-620
Cow position: chr20:7439017-7438869 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 25

Conread position: 475-619
Cow position: chr20:18837320-18837173 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 479-620
Cow position: chr20:5636325-5636468 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 482-619
Cow position: chr20:14433580-14433443 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 83, 43

Show alignments to all cow chromosomes.