Cow genome map
Conread name: | Emb1-C0005215_D03 |
Conread position: | 1-274 |
Cow position: | chr20:13757945-13758232 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 192 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 3-300 |
Cow position: | chr20:37579143-37579456 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 212 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 58, 122 |
Conread position: | 4-264 |
Cow position: | chr20:29572499-29572224 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 189 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 61, 131 |
Conread position: | 4-265 |
Cow position: | chr20:4799957-4799687 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 181 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 72, 22 |
Conread position: | 4-266 |
Cow position: | chr20:8313746-8313471 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 184 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 72, 201 |
Conread position: | 4-273 |
Cow position: | chr20:2791662-2791374 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 194 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 57, 205 |
Conread position: | 4-277 |
Cow position: | chr20:24516558-24516842 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 195 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 134, 56 |
Conread position: | 11-207 |
Cow position: | chr20:3032632-3032831 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 143 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 56, 114 |
Conread position: | 269-474 |
Cow position: | chr20:27870619-27870826 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 145 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 94, 148 |
Conread position: | 279-407 |
Cow position: | chr20:9520715-9520586 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 101 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 88, 124 |
Conread position: | 279-427 |
Cow position: | chr20:29949950-29950095 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 117 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 132, 84 |
Conread position: | 279-427 |
Cow position: | chr20:30686997-30687146 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 111 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 82, 138 |
Conread position: | 279-448 |
Cow position: | chr20:5536365-5536534 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 123 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 88, 138 |
Conread position: | 280-433 |
Cow position: | chr20:17660319-17660169 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 86, 119 |
Conread position: | 283-419 |
Cow position: | chr20:20753377-20753240 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 102 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 131, 0 |
Conread position: | 376-620 |
Cow position: | chr20:24391727-24391964 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 175 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 30, 73 |
Conread position: | 386-620 |
Cow position: | chr20:17734022-17733790 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 176 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 184, 62 |
Conread position: | 393-619 |
Cow position: | chr20:18321039-18320808 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 393-619 |
Cow position: | chr20:25009885-25009656 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 176 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 52, 183 |
Conread position: | 393-619 |
Cow position: | chr20:28982457-28982682 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 167 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 189, 15 |
Conread position: | 393-620 |
Cow position: | chr20:7550013-7550223 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 169 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 393-620 |
Cow position: | chr20:40256727-40256955 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 172 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 25, 106 |
Conread position: | 397-616 |
Cow position: | chr20:13269387-13269607 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 58 |
Conread position: | 397-619 |
Cow position: | chr20:12996247-12996027 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 130 |
Conread position: | 397-619 |
Cow position: | chr20:19146632-19146858 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 165 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 397-619 |
Cow position: | chr20:19410603-19410381 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 162 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 103, 42 |
Conread position: | 397-619 |
Cow position: | chr20:33144791-33144569 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 165 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 49, 34 |
Conread position: | 397-619 |
Cow position: | chr20:40127574-40127352 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 160 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 45, 145 |
Conread position: | 397-620 |
Cow position: | chr20:6240767-6240537 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 170 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 397-620 |
Cow position: | chr20:11614281-11614058 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 165 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 46, 183 |
Conread position: | 397-620 |
Cow position: | chr20:12334144-12334359 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 168 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 51, 113 |
Conread position: | 397-620 |
Cow position: | chr20:14806646-14806870 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 176 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 25, 126 |
Conread position: | 397-620 |
Cow position: | chr20:19328162-19328386 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 168 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 167, 109 |
Conread position: | 397-620 |
Cow position: | chr20:19363600-19363381 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 168 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 52, 100 |
Conread position: | 397-620 |
Cow position: | chr20:22445874-22445653 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 169 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 17, 124 |
Conread position: | 397-620 |
Cow position: | chr20:35958411-35958630 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 167 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 167, 43 |
Conread position: | 398-620 |
Cow position: | chr20:15549135-15548916 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 173 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 12, 110 |
Conread position: | 401-610 |
Cow position: | chr20:36997480-36997690 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 139 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 410-619 |
Cow position: | chr20:27339842-27340046 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 160 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 410-620 |
Cow position: | chr20:14572579-14572375 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 166 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 34, 13 |
Conread position: | 411-620 |
Cow position: | chr20:7442348-7442143 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 169 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 38, 108 |
Conread position: | 411-620 |
Cow position: | chr20:12420845-12420635 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 119 |
Conread position: | 411-620 |
Cow position: | chr20:14735453-14735660 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 164 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 170, 108 |
Conread position: | 411-620 |
Cow position: | chr20:14759888-14759676 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 163 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 35, 137 |
Conread position: | 412-618 |
Cow position: | chr20:26996311-26996516 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 39 |
Conread position: | 412-620 |
Cow position: | chr20:37200137-37200343 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 159 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 149, 36 |
Conread position: | 414-620 |
Cow position: | chr20:40511978-40511774 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 161 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 127, 111 |
Conread position: | 415-620 |
Cow position: | chr20:11923459-11923258 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 151 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 33, 8 |
Conread position: | 417-620 |
Cow position: | chr20:38768671-38768472 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 161 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 32, 103 |
Conread position: | 421-613 |
Cow position: | chr20:14879572-14879764 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 153 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 27, 94 |
Conread position: | 421-620 |
Cow position: | chr20:3781641-3781442 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 154 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 22, 92 |
Conread position: | 421-620 |
Cow position: | chr20:28296076-28296276 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 150 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 22, 86 |
Conread position: | 428-620 |
Cow position: | chr20:33176975-33177174 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 153 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 16, 112 |
Conread position: | 434-620 |
Cow position: | chr20:29805862-29805677 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 132 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 15, 33 |
Conread position: | 435-620 |
Cow position: | chr20:35907246-35907067 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 142 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 129, 84 |
Conread position: | 440-620 |
Cow position: | chr20:13994615-13994798 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 139 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 442-620 |
Cow position: | chr20:11043688-11043518 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 135 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 139, 68 |
Conread position: | 442-620 |
Cow position: | chr20:38415163-38414985 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 127 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 139, 77 |
Conread position: | 444-620 |
Cow position: | chr20:9988397-9988572 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 128 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 137, 81 |
Conread position: | 449-620 |
Cow position: | chr20:2204849-2204686 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 130 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 133, 11 |
Conread position: | 465-620 |
Cow position: | chr20:28831794-28831953 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 127 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 32, 65 |
Conread position: | 466-620 |
Cow position: | chr20:7439017-7438869 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 123 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 118, 25 |
Conread position: | 475-619 |
Cow position: | chr20:18837320-18837173 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 118 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 479-620 |
Cow position: | chr20:5636325-5636468 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 110 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 482-619 |
Cow position: | chr20:14433580-14433443 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 83, 43 |
Show alignments to all cow chromosomes.