Cow genome map


           Conread name:
           Emb1-C0005215_D03
        

               Conread position:
               4-266
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 204
               

               Conread position:
               4-300
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               5, 73
               

               Conread position:
               6-273
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               76, 180
               

               Conread position:
               6-274
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               129, 54
               

               Conread position:
               26-300
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               54, 176
               

               Conread position:
               252-407
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               108, 24
               

               Conread position:
               269-420
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               279-401
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               279-413
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 81
               

               Conread position:
               279-433
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               88, 138
               

               Conread position:
               279-433
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               83, 40
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               87, 46
               

               Conread position:
               280-433
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 137
               

               Conread position:
               280-448
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               354-619
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 160
               

               Conread position:
               375-620
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               382-620
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               387-620
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               393-612
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 8
               

               Conread position:
               393-616
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               188, 104
               

               Conread position:
               393-620
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               56, 35
               

               Conread position:
               393-620
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               393-620
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               56, 7
               

               Conread position:
               394-620
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 7
               

               Conread position:
               394-620
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               54, 89
               

               Conread position:
               396-615
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               51, 64
               

               Conread position:
               397-612
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               397-613
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               397-617
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 118
               

               Conread position:
               397-617
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               47, 13
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               46, 123
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 139
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               46, 119
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               184, 17
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               46, 172
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               52, 66
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               24, 56
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 108
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               146, 26
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 18
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 44
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               84, 130
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               51, 160
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 143
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               159, 98
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               184, 59
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 180
               

               Conread position:
               398-619
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               45, 70
               

               Conread position:
               398-619
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               45, 15
               

               Conread position:
               398-620
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               49, 70
               

               Conread position:
               399-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               46, 121
               

               Conread position:
               399-620
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               54, 216
               

               Conread position:
               401-619
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               403-620
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 120
               

               Conread position:
               404-616
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               39, 111
               

               Conread position:
               405-620
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               5, 47
               

               Conread position:
               407-620
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               38, 73
               

               Conread position:
               410-612
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               33, 109
               

               Conread position:
               410-618
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               171, 68
               

               Conread position:
               410-620
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               171, 101
               

               Conread position:
               410-620
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 116
               

               Conread position:
               410-620
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               35, 111
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               170, 44
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               33, 94
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               172, 36
               

               Conread position:
               412-606
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               413-618
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               34, 113
               

               Conread position:
               413-620
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               168, 21
               

               Conread position:
               413-620
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               156, 43
               

               Conread position:
               415-618
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               166, 51
               

               Conread position:
               415-620
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               33, 86
               

               Conread position:
               416-620
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               153, 12
               

               Conread position:
               419-620
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               25, 102
               

               Conread position:
               419-620
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               48, 108
               

               Conread position:
               419-620
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               161
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               158, 12
               

               Conread position:
               420-620
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               420-620
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               431-620
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               150, 87
               

               Conread position:
               435-620
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               10, 159
               

               Conread position:
               445-618
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               125, 9
               

               Conread position:
               452-620
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               457-620
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               459-620
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               475-620
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               106, 36
               
Show alignments to all cow chromosomes.