Cow genome map

Conread name: Emb1-C0005215_D03

Conread position: 4-266
Cow position: chr22:1319029-1319308 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 204

Conread position: 4-300
Cow position: chr22:9657957-9658266 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 73

Conread position: 6-273
Cow position: chr22:327513-327238 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 184
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 76, 180

Conread position: 6-274
Cow position: chr22:302342-302071 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 129, 54

Conread position: 26-300
Cow position: chr22:36267032-36267314 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 54, 176

Conread position: 252-407
Cow position: chr22:44518299-44518146 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 108, 24

Conread position: 269-420
Cow position: chr22:21590774-21590928 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 279-401
Cow position: chr22:23800855-23800730 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 279-413
Cow position: chr22:3305237-3305103 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 81

Conread position: 279-433
Cow position: chr22:36860186-36860031 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 88, 138

Conread position: 279-433
Cow position: chr22:42992538-42992692 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 40

Conread position: 279-448
Cow position: chr22:6333075-6333240 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 279-448
Cow position: chr22:37292312-37292147 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 279-448
Cow position: chr22:39468152-39467987 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 279-448
Cow position: chr22:44458311-44458478 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 46

Conread position: 280-433
Cow position: chr22:3803543-3803697 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 137

Conread position: 280-448
Cow position: chr22:44935331-44935493 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 354-619
Cow position: chr22:38940278-38940011 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 160

Conread position: 375-620
Cow position: chr22:33949311-33949061 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 17

Conread position: 382-620
Cow position: chr22:30483613-30483855 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 66, 0

Conread position: 387-620
Cow position: chr22:8446637-8446877 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 0

Conread position: 393-612
Cow position: chr22:3993323-3993542 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 8

Conread position: 393-616
Cow position: chr22:26097901-26097686 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 188, 104

Conread position: 393-620
Cow position: chr22:9734568-9734792 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 56, 35

Conread position: 393-620
Cow position: chr22:11200755-11200974 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 53, 76

Conread position: 393-620
Cow position: chr22:30954752-30954974 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 56, 7

Conread position: 394-620
Cow position: chr22:4017189-4017415 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 394-620
Cow position: chr22:33485890-33485663 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 54, 89

Conread position: 396-615
Cow position: chr22:30583205-30583425 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 51, 64

Conread position: 397-612
Cow position: chr22:30689347-30689565 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 397-613
Cow position: chr22:3316845-3317051 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 51, 59

Conread position: 397-617
Cow position: chr22:4119852-4119630 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 118

Conread position: 397-617
Cow position: chr22:18926070-18926289 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 47, 13

Conread position: 397-619
Cow position: chr22:1484578-1484797 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 123

Conread position: 397-619
Cow position: chr22:22861195-22860972 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 139

Conread position: 397-619
Cow position: chr22:39472660-39472439 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 46, 119

Conread position: 397-620
Cow position: chr22:1289791-1289578 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 184, 17

Conread position: 397-620
Cow position: chr22:3842342-3842556 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 46, 172

Conread position: 397-620
Cow position: chr22:16044713-16044481 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 52, 66

Conread position: 397-620
Cow position: chr22:16251849-16251627 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 56

Conread position: 397-620
Cow position: chr22:16620895-16621114 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 48, 18

Conread position: 397-620
Cow position: chr22:17993314-17993094 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 108

Conread position: 397-620
Cow position: chr22:18837973-18838188 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 146, 26

Conread position: 397-620
Cow position: chr22:21296007-21295788 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 18

Conread position: 397-620
Cow position: chr22:26151403-26151174 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 20, 44

Conread position: 397-620
Cow position: chr22:27322035-27322256 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 84, 130

Conread position: 397-620
Cow position: chr22:28071270-28071495 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 51, 160

Conread position: 397-620
Cow position: chr22:28370662-28370881 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 143

Conread position: 397-620
Cow position: chr22:30712465-30712698 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 397-620
Cow position: chr22:34476284-34476064 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 159, 98

Conread position: 397-620
Cow position: chr22:43397735-43397951 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 184, 59

Conread position: 397-620
Cow position: chr22:46568173-46567950 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 180

Conread position: 398-619
Cow position: chr22:12682075-12681865 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 70

Conread position: 398-619
Cow position: chr22:27171538-27171318 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 45, 15

Conread position: 398-620
Cow position: chr22:1279669-1279448 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 49, 70

Conread position: 399-620
Cow position: chr22:16812445-16812227 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 46, 121

Conread position: 399-620
Cow position: chr22:38439440-38439220 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 54, 216

Conread position: 401-619
Cow position: chr22:14091511-14091284 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 403-620
Cow position: chr22:5042041-5042256 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 120

Conread position: 404-616
Cow position: chr22:17813951-17814160 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 111

Conread position: 405-620
Cow position: chr22:21355418-21355200 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 47

Conread position: 407-620
Cow position: chr22:37201583-37201792 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 73

Conread position: 410-612
Cow position: chr22:26339488-26339686 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 33, 109

Conread position: 410-618
Cow position: chr22:19848666-19848459 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 171, 68

Conread position: 410-620
Cow position: chr22:2623785-2623581 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 171, 101

Conread position: 410-620
Cow position: chr22:4650910-4651119 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 116

Conread position: 410-620
Cow position: chr22:40048292-40048491 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 111

Conread position: 411-620
Cow position: chr22:9127136-9127344 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 170, 44

Conread position: 411-620
Cow position: chr22:34712444-34712662 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 94

Conread position: 411-620
Cow position: chr22:38980637-38980835 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 172, 36

Conread position: 412-606
Cow position: chr22:10339381-10339191 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 113, 0

Conread position: 413-618
Cow position: chr22:15090472-15090677 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 113

Conread position: 413-620
Cow position: chr22:11130608-11130806 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 168, 21

Conread position: 413-620
Cow position: chr22:28058309-28058114 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 156, 43

Conread position: 415-618
Cow position: chr22:28640418-28640214 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 166, 51

Conread position: 415-620
Cow position: chr22:6215820-6215621 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 86

Conread position: 416-620
Cow position: chr22:1822138-1821935 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 153, 12

Conread position: 419-620
Cow position: chr22:6360750-6360551 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 102

Conread position: 419-620
Cow position: chr22:24066497-24066298 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 48, 108

Conread position: 419-620
Cow position: chr22:26141012-26141214 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 158, 12

Conread position: 420-620
Cow position: chr22:28665007-28665224 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 420-620
Cow position: chr22:37324286-37324483 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 26, 47

Conread position: 431-620
Cow position: chr22:21526841-21526654 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 150, 87

Conread position: 435-620
Cow position: chr22:7882303-7882491 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 10, 159

Conread position: 445-618
Cow position: chr22:27825603-27825775 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 125, 9

Conread position: 452-620
Cow position: chr22:5616071-5616246 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 457-620
Cow position: chr22:10632692-10632857 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 124, 0

Conread position: 459-620
Cow position: chr22:12974614-12974451 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 475-620
Cow position: chr22:5675377-5675236 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 106, 36

Show alignments to all cow chromosomes.