Cow genome map
| Conread name: | Emb1-C0005215_D03 |
| Conread position: | 4-244 |
| Cow position: | chr23:8980855-8980603 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 200 |
| Conread position: | 4-259 |
| Cow position: | chr23:19332767-19332494 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 36 |
| Conread position: | 4-263 |
| Cow position: | chr23:19017343-19017605 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 135, 75 |
| Conread position: | 4-269 |
| Cow position: | chr23:5875138-5874861 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 72, 256 |
| Conread position: | 279-445 |
| Cow position: | chr23:15218523-15218363 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 279-448 |
| Cow position: | chr23:31164163-31164330 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 135, 86 |
| Conread position: | 279-488 |
| Cow position: | chr23:15526935-15527148 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 88, 138 |
| Conread position: | 282-432 |
| Cow position: | chr23:4513845-4513995 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 79, 134 |
| Conread position: | 283-449 |
| Cow position: | chr23:3879724-3879558 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 75, 134 |
| Conread position: | 346-620 |
| Cow position: | chr23:38455513-38455238 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 33 |
| Conread position: | 355-620 |
| Cow position: | chr23:221751-222012 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 36 |
| Conread position: | 389-619 |
| Cow position: | chr23:2371091-2371315 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 392-620 |
| Cow position: | chr23:7845002-7845236 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 393-618 |
| Cow position: | chr23:533947-534169 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 132 |
| Conread position: | 393-620 |
| Cow position: | chr23:344461-344231 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 393-620 |
| Cow position: | chr23:37065554-37065786 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 397-619 |
| Cow position: | chr23:14191273-14191495 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 184, 24 |
| Conread position: | 397-619 |
| Cow position: | chr23:24867023-24867248 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 397-619 |
| Cow position: | chr23:26741729-26741514 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 45, 116 |
| Conread position: | 397-619 |
| Cow position: | chr23:29459373-29459148 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 145 |
| Conread position: | 397-620 |
| Cow position: | chr23:406437-406229 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 397-620 |
| Cow position: | chr23:1605400-1605620 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 47, 117 |
| Conread position: | 397-620 |
| Cow position: | chr23:3727678-3727452 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 178, 25 |
| Conread position: | 397-620 |
| Cow position: | chr23:9734140-9734358 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 169, 54 |
| Conread position: | 397-620 |
| Cow position: | chr23:16563563-16563784 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 48, 106 |
| Conread position: | 406-619 |
| Cow position: | chr23:186901-187120 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 409-620 |
| Cow position: | chr23:1700652-1700851 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 410-620 |
| Cow position: | chr23:21343512-21343307 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 411-620 |
| Cow position: | chr23:29034047-29034260 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 6, 48 |
| Conread position: | 411-620 |
| Cow position: | chr23:39806607-39806810 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 12, 104 |
| Conread position: | 415-620 |
| Cow position: | chr23:3394750-3394552 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 166, 67 |
| Conread position: | 415-620 |
| Cow position: | chr23:19538255-19538052 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 29, 160 |
| Conread position: | 416-620 |
| Cow position: | chr23:38208453-38208669 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 103, 10 |
| Conread position: | 418-620 |
| Cow position: | chr23:20057125-20056923 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 30, 118 |
| Conread position: | 419-620 |
| Cow position: | chr23:1803537-1803734 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 421-618 |
| Cow position: | chr23:1878126-1877932 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 29, 99 |
| Conread position: | 421-620 |
| Cow position: | chr23:21452988-21452788 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 21, 39 |
| Conread position: | 421-620 |
| Cow position: | chr23:26632545-26632746 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 422-620 |
| Cow position: | chr23:2282428-2282231 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 26, 59 |
| Conread position: | 427-620 |
| Cow position: | chr23:41348897-41348701 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 428-620 |
| Cow position: | chr23:3140616-3140807 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 152 |
| Conread position: | 431-616 |
| Cow position: | chr23:6767647-6767830 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 150, 7 |
| Conread position: | 431-620 |
| Cow position: | chr23:16700284-16700095 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 443-620 |
| Cow position: | chr23:27544601-27544772 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 138, 13 |
| Conread position: | 451-620 |
| Cow position: | chr23:2457236-2457407 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 11, 158 |
| Conread position: | 467-619 |
| Cow position: | chr23:30585870-30585719 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 114, 94 |
Show alignments to all cow chromosomes.