Cow genome map

Conread name: Emb1-C0005215_D03

Conread position: 4-266
Cow position: chr24:6351912-6352192 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 77, 207

Conread position: 268-448
Cow position: chr24:12087636-12087816 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 99, 149

Conread position: 279-433
Cow position: chr24:147164-147009 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 83, 138

Conread position: 279-448
Cow position: chr24:8606264-8606433 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 138

Conread position: 279-448
Cow position: chr24:9545503-9545671 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 40

Conread position: 279-488
Cow position: chr24:19834852-19835067 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 126

Conread position: 354-620
Cow position: chr24:20874329-20874597 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 47

Conread position: 360-620
Cow position: chr24:211641-211902 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 89, 19

Conread position: 394-620
Cow position: chr24:32205103-32204877 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 7

Conread position: 395-620
Cow position: chr24:17955756-17955524 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 34, 22

Conread position: 397-619
Cow position: chr24:20024302-20024532 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 397-619
Cow position: chr24:29673214-29673436 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 51, 124

Conread position: 397-620
Cow position: chr24:11006909-11007137 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 134

Conread position: 397-620
Cow position: chr24:20970097-20969882 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 51, 121

Conread position: 397-620
Cow position: chr24:27809874-27810104 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 172

Conread position: 397-620
Cow position: chr24:28062636-28062869 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 397-620
Cow position: chr24:29596116-29595893 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 105, 51

Conread position: 397-620
Cow position: chr24:30177931-30178152 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 47, 112

Conread position: 397-620
Cow position: chr24:34532818-34533045 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 397-620
Cow position: chr24:38347374-38347602 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 125

Conread position: 397-620
Cow position: chr24:42007441-42007657 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 173, 140

Conread position: 397-620
Cow position: chr24:44041315-44041094 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 62

Conread position: 398-620
Cow position: chr24:7001373-7001149 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 206

Conread position: 399-620
Cow position: chr24:18485303-18485080 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 141

Conread position: 401-620
Cow position: chr24:29027748-29027961 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 180, 47

Conread position: 408-612
Cow position: chr24:17104861-17104663 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 111

Conread position: 409-620
Cow position: chr24:40129832-40130044 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 155, 39

Conread position: 410-620
Cow position: chr24:16556923-16556722 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 65, 29

Conread position: 411-618
Cow position: chr24:40184332-40184541 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 42, 13

Conread position: 411-620
Cow position: chr24:30545146-30544942 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 32, 17

Conread position: 412-618
Cow position: chr24:27941296-27941094 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 10

Conread position: 414-620
Cow position: chr24:3430447-3430650 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 28, 91

Conread position: 415-620
Cow position: chr24:15057116-15057318 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 32, 19

Conread position: 416-620
Cow position: chr24:35073806-35074010 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 103

Conread position: 418-620
Cow position: chr24:17294471-17294274 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 25, 102

Conread position: 419-620
Cow position: chr24:37650387-37650588 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 93

Conread position: 420-610
Cow position: chr24:24491296-24491103 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 88

Conread position: 423-620
Cow position: chr24:591631-591831 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 98

Conread position: 423-620
Cow position: chr24:35675264-35675462 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 25, 112

Conread position: 425-620
Cow position: chr24:30314313-30314112 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 161
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 23, 0

Conread position: 425-620
Cow position: chr24:36404424-36404227 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 156, 0

Conread position: 428-620
Cow position: chr24:41755592-41755780 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 153, 20

Conread position: 478-620
Cow position: chr24:31359099-31359241 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 480-620
Cow position: chr24:39833737-39833595 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 0

Show alignments to all cow chromosomes.