Cow genome map

Conread name: Emb1-C0005215_D03

Conread position: 10-174
Cow position: chr27:10011203-10011039 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 129, 69

Conread position: 268-446
Cow position: chr27:9991857-9991683 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 269-448
Cow position: chr27:26326414-26326593 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 148

Conread position: 279-427
Cow position: chr27:8199171-8199320 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 81, 138

Conread position: 279-432
Cow position: chr27:12748400-12748553 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 89, 137

Conread position: 279-433
Cow position: chr27:13898678-13898830 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 74, 85

Conread position: 279-448
Cow position: chr27:9331097-9331266 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 138

Conread position: 279-462
Cow position: chr27:19524917-19525102 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 91, 137

Conread position: 354-620
Cow position: chr27:27449154-27449414 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 48

Conread position: 374-620
Cow position: chr27:7934904-7935143 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 17

Conread position: 385-618
Cow position: chr27:23483474-23483244 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 34, 127

Conread position: 391-612
Cow position: chr27:6541867-6541652 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 57, 9

Conread position: 394-620
Cow position: chr27:4673262-4673034 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 136

Conread position: 397-610
Cow position: chr27:20641106-20641314 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 107

Conread position: 397-617
Cow position: chr27:27038605-27038822 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 19, 119

Conread position: 397-619
Cow position: chr27:815602-815382 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 51, 112

Conread position: 397-619
Cow position: chr27:19388254-19388030 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 20

Conread position: 397-620
Cow position: chr27:8629637-8629858 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 51, 75

Conread position: 397-620
Cow position: chr27:9090564-9090788 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 154

Conread position: 397-620
Cow position: chr27:13875965-13875746 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 184, 37

Conread position: 397-620
Cow position: chr27:22220791-22220571 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 46, 178

Conread position: 397-620
Cow position: chr27:23454913-23455140 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 20

Conread position: 397-620
Cow position: chr27:23576302-23576524 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 166

Conread position: 397-620
Cow position: chr27:26424352-26424571 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 90, 33

Conread position: 397-620
Cow position: chr27:26427891-26428118 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 51, 0

Conread position: 397-620
Cow position: chr27:27388791-27389003 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 50, 115

Conread position: 397-620
Cow position: chr27:30406794-30407022 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 49, 148

Conread position: 398-620
Cow position: chr27:25380227-25380008 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 122

Conread position: 399-620
Cow position: chr27:7212487-7212696 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 122, 49

Conread position: 400-610
Cow position: chr27:26643907-26643705 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 94

Conread position: 407-619
Cow position: chr27:20796011-20795809 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 98

Conread position: 407-620
Cow position: chr27:23554096-23554315 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 20

Conread position: 408-619
Cow position: chr27:1353809-1353603 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 141, 48

Conread position: 411-620
Cow position: chr27:6523269-6523053 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 131

Conread position: 411-620
Cow position: chr27:12596980-12596780 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 38

Conread position: 412-617
Cow position: chr27:22179575-22179776 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 100

Conread position: 413-620
Cow position: chr27:27640771-27640987 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 158, 0

Conread position: 415-620
Cow position: chr27:27259827-27259623 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 152, 110

Conread position: 417-620
Cow position: chr27:707164-706966 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 164, 79

Conread position: 418-620
Cow position: chr27:2682927-2683129 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 31, 116

Conread position: 419-620
Cow position: chr27:22771973-22771766 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 419-620
Cow position: chr27:27040824-27040620 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 29, 108

Conread position: 421-620
Cow position: chr27:16871706-16871898 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 160, 32

Conread position: 421-620
Cow position: chr27:22454565-22454763 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 100

Conread position: 421-620
Cow position: chr27:28164198-28164391 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 23, 62

Conread position: 425-619
Cow position: chr27:22547197-22547392 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 156, 31

Conread position: 428-619
Cow position: chr27:1498520-1498333 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 69

Conread position: 428-620
Cow position: chr27:18593474-18593284 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 20, 0

Conread position: 429-620
Cow position: chr27:19685509-19685696 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 157
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 19, 92

Conread position: 443-620
Cow position: chr27:20592174-20591996 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 122, 76

Conread position: 444-619
Cow position: chr27:18739577-18739400 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 120, 67

Conread position: 448-620
Cow position: chr27:30988983-30988811 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 121, 93

Conread position: 452-620
Cow position: chr27:27550566-27550727 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 129, 67

Conread position: 492-620
Cow position: chr27:17331644-17331514 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 0

Show alignments to all cow chromosomes.