Cow genome map
Conread name: | Emb1-C0005215_D03 |
Conread position: | 10-174 |
Cow position: | chr27:10011203-10011039 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 129, 69 |
Conread position: | 268-446 |
Cow position: | chr27:9991857-9991683 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 129 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 269-448 |
Cow position: | chr27:26326414-26326593 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 130 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 98, 148 |
Conread position: | 279-427 |
Cow position: | chr27:8199171-8199320 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 110 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 81, 138 |
Conread position: | 279-432 |
Cow position: | chr27:12748400-12748553 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 112 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 89, 137 |
Conread position: | 279-433 |
Cow position: | chr27:13898678-13898830 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 113 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 74, 85 |
Conread position: | 279-448 |
Cow position: | chr27:9331097-9331266 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 126 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 88, 138 |
Conread position: | 279-462 |
Cow position: | chr27:19524917-19525102 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 136 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 91, 137 |
Conread position: | 354-620 |
Cow position: | chr27:27449154-27449414 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 197 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 24, 48 |
Conread position: | 374-620 |
Cow position: | chr27:7934904-7935143 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 167 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 74, 17 |
Conread position: | 385-618 |
Cow position: | chr27:23483474-23483244 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 174 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 34, 127 |
Conread position: | 391-612 |
Cow position: | chr27:6541867-6541652 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 170 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 57, 9 |
Conread position: | 394-620 |
Cow position: | chr27:4673262-4673034 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 136 |
Conread position: | 397-610 |
Cow position: | chr27:20641106-20641314 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 155 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 21, 107 |
Conread position: | 397-617 |
Cow position: | chr27:27038605-27038822 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 166 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 19, 119 |
Conread position: | 397-619 |
Cow position: | chr27:815602-815382 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 171 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 51, 112 |
Conread position: | 397-619 |
Cow position: | chr27:19388254-19388030 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 20 |
Conread position: | 397-620 |
Cow position: | chr27:8629637-8629858 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 177 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 51, 75 |
Conread position: | 397-620 |
Cow position: | chr27:9090564-9090788 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 175 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 51, 154 |
Conread position: | 397-620 |
Cow position: | chr27:13875965-13875746 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 174 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 184, 37 |
Conread position: | 397-620 |
Cow position: | chr27:22220791-22220571 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 171 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 46, 178 |
Conread position: | 397-620 |
Cow position: | chr27:23454913-23455140 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 166 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 111, 20 |
Conread position: | 397-620 |
Cow position: | chr27:23576302-23576524 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 158 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 48, 166 |
Conread position: | 397-620 |
Cow position: | chr27:26424352-26424571 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 173 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 90, 33 |
Conread position: | 397-620 |
Cow position: | chr27:26427891-26428118 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 173 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 397-620 |
Cow position: | chr27:27388791-27389003 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 170 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 50, 115 |
Conread position: | 397-620 |
Cow position: | chr27:30406794-30407022 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 162 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 49, 148 |
Conread position: | 398-620 |
Cow position: | chr27:25380227-25380008 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 164 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 51, 122 |
Conread position: | 399-620 |
Cow position: | chr27:7212487-7212696 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 164 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 122, 49 |
Conread position: | 400-610 |
Cow position: | chr27:26643907-26643705 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 164 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 48, 94 |
Conread position: | 407-619 |
Cow position: | chr27:20796011-20795809 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 160 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 42, 98 |
Conread position: | 407-620 |
Cow position: | chr27:23554096-23554315 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 168 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 41, 20 |
Conread position: | 408-619 |
Cow position: | chr27:1353809-1353603 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 158 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 141, 48 |
Conread position: | 411-620 |
Cow position: | chr27:6523269-6523053 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 163 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 38, 131 |
Conread position: | 411-620 |
Cow position: | chr27:12596980-12596780 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 152 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 9, 38 |
Conread position: | 412-617 |
Cow position: | chr27:22179575-22179776 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 162 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 38, 100 |
Conread position: | 413-620 |
Cow position: | chr27:27640771-27640987 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 168 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 158, 0 |
Conread position: | 415-620 |
Cow position: | chr27:27259827-27259623 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 156 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 152, 110 |
Conread position: | 417-620 |
Cow position: | chr27:707164-706966 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 157 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 164, 79 |
Conread position: | 418-620 |
Cow position: | chr27:2682927-2683129 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 147 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 31, 116 |
Conread position: | 419-620 |
Cow position: | chr27:22771973-22771766 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 157 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 419-620 |
Cow position: | chr27:27040824-27040620 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 153 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 29, 108 |
Conread position: | 421-620 |
Cow position: | chr27:16871706-16871898 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 153 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 160, 32 |
Conread position: | 421-620 |
Cow position: | chr27:22454565-22454763 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 151 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 5, 100 |
Conread position: | 421-620 |
Cow position: | chr27:28164198-28164391 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 154 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 23, 62 |
Conread position: | 425-619 |
Cow position: | chr27:22547197-22547392 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 151 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 156, 31 |
Conread position: | 428-619 |
Cow position: | chr27:1498520-1498333 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 150 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 18, 69 |
Conread position: | 428-620 |
Cow position: | chr27:18593474-18593284 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 150 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 429-620 |
Cow position: | chr27:19685509-19685696 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 157 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 19, 92 |
Conread position: | 443-620 |
Cow position: | chr27:20592174-20591996 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 139 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 122, 76 |
Conread position: | 444-619 |
Cow position: | chr27:18739577-18739400 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 133 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 120, 67 |
Conread position: | 448-620 |
Cow position: | chr27:30988983-30988811 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 136 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 121, 93 |
Conread position: | 452-620 |
Cow position: | chr27:27550566-27550727 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 126 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 129, 67 |
Conread position: | 492-620 |
Cow position: | chr27:17331644-17331514 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 89, 0 |
Show alignments to all cow chromosomes.