Cow genome map


           Conread name:
           Emb1-C0005215_D03
        

               Conread position:
               1-272
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 94
               

               Conread position:
               3-257
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               136, 6
               

               Conread position:
               3-273
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               100, 202
               

               Conread position:
               3-288
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               59, 8
               

               Conread position:
               4-252
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               135, 63
               

               Conread position:
               26-276
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               37-298
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               268-448
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               99, 140
               

               Conread position:
               268-448
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               100, 150
               

               Conread position:
               269-448
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               90, 135
               

               Conread position:
               269-479
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               97, 133
               

               Conread position:
               279-433
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               83, 138
               

               Conread position:
               280-449
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               87, 137
               

               Conread position:
               346-620
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               52, 109
               

               Conread position:
               354-619
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               62, 51
               

               Conread position:
               355-619
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               89, 24
               

               Conread position:
               355-620
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               356-618
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 35
               

               Conread position:
               362-619
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               26, 41
               

               Conread position:
               372-619
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               375-618
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               71, 16
               

               Conread position:
               392-620
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               54, 123
               

               Conread position:
               393-619
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               50, 125
               

               Conread position:
               393-620
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 119
               

               Conread position:
               393-620
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               393-620
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               50, 135
               

               Conread position:
               394-620
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 126
               

               Conread position:
               397-618
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 143
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               19, 133
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 138
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               50, 14
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               91, 42
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               51, 84
               

               Conread position:
               399-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               401-613
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               401-620
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               409-614
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               409-620
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               39, 120
               

               Conread position:
               409-620
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               39, 75
               

               Conread position:
               410-617
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               38, 183
               

               Conread position:
               410-619
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               171, 38
               

               Conread position:
               410-620
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               171, 115
               

               Conread position:
               411-619
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               34, 96
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               35, 10
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               37, 49
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               12, 102
               

               Conread position:
               414-620
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               167, 59
               

               Conread position:
               417-620
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               19, 104
               

               Conread position:
               419-619
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               162, 36
               

               Conread position:
               423-620
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               158, 24
               

               Conread position:
               441-616
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               141, 69
               

               Conread position:
               442-612
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               140, 42
               

               Conread position:
               443-620
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 75
               

               Conread position:
               444-616
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               451-620
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               130, 5
               

               Conread position:
               452-620
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               129, 11
               

               Conread position:
               462-619
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               119, 58
               

               Conread position:
               469-620
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               112, 35
               

               Conread position:
               471-620
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               481-620
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               100, 111
               

               Conread position:
               488-616
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               93, 0
               
Show alignments to all cow chromosomes.