Cow genome map


           Conread name:
           Emb1-C0005215_D03
        

               Conread position:
               39-273
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               100, 45
               

               Conread position:
               268-448
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               99, 40
               

               Conread position:
               268-489
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               99, 135
               

               Conread position:
               279-404
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               279-417
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               279-433
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 138
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               88, 138
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 138
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               88, 138
               

               Conread position:
               279-449
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               165, 122
               

               Conread position:
               280-448
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               131, 121
               

               Conread position:
               367-620
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               389-618
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 124
               

               Conread position:
               393-620
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               156, 126
               

               Conread position:
               397-616
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 40
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               104, 56
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 123
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 129
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               167, 122
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 123
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               23, 108
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               51, 119
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               51, 105
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               46, 124
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               398-620
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               49, 79
               

               Conread position:
               399-619
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               44, 131
               

               Conread position:
               399-620
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               401-618
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               47, 66
               

               Conread position:
               410-619
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               171, 101
               

               Conread position:
               411-619
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 115
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               32, 109
               

               Conread position:
               416-620
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               157, 32
               

               Conread position:
               418-620
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               25, 53
               

               Conread position:
               419-620
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               149, 15
               

               Conread position:
               420-620
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               161, 36
               

               Conread position:
               421-620
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 97
               

               Conread position:
               423-619
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               6, 76
               

               Conread position:
               423-620
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               428-620
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               431-620
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               21, 105
               

               Conread position:
               432-616
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               16, 88
               

               Conread position:
               433-619
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               435-619
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               10, 79
               

               Conread position:
               438-619
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               441-620
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               129, 50
               

               Conread position:
               444-620
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               123, 81
               

               Conread position:
               449-620
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               133, 76
               

               Conread position:
               468-620
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               113, 35
               

               Conread position:
               489-619
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               92, 0
               
Show alignments to all cow chromosomes.