Cow genome map


           Conread name:
           Emb1-C0005215_D03
        

               Conread position:
               1-266
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               6, 43
               

               Conread position:
               3-265
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               71, 57
               

               Conread position:
               4-264
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 194
               

               Conread position:
               4-275
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               64, 133
               

               Conread position:
               24-257
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               107, 9
               

               Conread position:
               57-266
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               82, 145
               

               Conread position:
               265-448
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               279-427
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               279-433
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               88, 40
               

               Conread position:
               279-433
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 138
               

               Conread position:
               279-445
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               90, 140
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 123
               

               Conread position:
               283-452
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               84, 134
               

               Conread position:
               336-620
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 43
               

               Conread position:
               346-620
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 103
               

               Conread position:
               354-620
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               94, 59
               

               Conread position:
               355-620
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               88, 29
               

               Conread position:
               360-620
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               83, 35
               

               Conread position:
               381-604
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               7, 137
               

               Conread position:
               382-620
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 15
               

               Conread position:
               387-620
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               16, 22
               

               Conread position:
               391-619
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 67
               

               Conread position:
               393-620
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               199, 7
               

               Conread position:
               393-620
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 91
               

               Conread position:
               393-620
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               188, 0
               

               Conread position:
               397-608
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               167, 31
               

               Conread position:
               397-610
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               63, 80
               

               Conread position:
               397-616
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               52, 121
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               46, 74
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               184, 54
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               49, 101
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 95
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               22, 84
               

               Conread position:
               397-619
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 17
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               177
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               167, 85
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               51, 130
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               22, 137
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               46, 82
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               51, 22
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               21, 150
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 94
               

               Conread position:
               398-620
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               183, 105
               

               Conread position:
               399-610
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               49, 155
               

               Conread position:
               399-619
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               400-618
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               48, 104
               

               Conread position:
               404-620
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               405-620
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               43, 9
               

               Conread position:
               407-620
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 41
               

               Conread position:
               410-613
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               411-618
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               411-618
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               32, 48
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               37, 49
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               33, 115
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               411-620
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               414-620
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               162
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               34, 163
               

               Conread position:
               415-620
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 90
               

               Conread position:
               415-620
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               34, 90
               

               Conread position:
               418-620
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               159
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               421-620
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 150
               

               Conread position:
               425-620
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               73, 94
               

               Conread position:
               428-620
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               15, 30
               

               Conread position:
               431-619
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               28, 106
               

               Conread position:
               431-620
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 80
               

               Conread position:
               432-620
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               49, 16
               

               Conread position:
               432-620
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               141, 42
               

               Conread position:
               434-618
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               106, 14
               

               Conread position:
               440-619
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               55, 18
               

               Conread position:
               442-619
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               12, 115
               

               Conread position:
               442-620
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               128, 75
               

               Conread position:
               442-620
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               444-616
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               444-619
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               127, 76
               

               Conread position:
               452-619
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               129, 6
               

               Conread position:
               464-620
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               117, 55
               

               Conread position:
               468-620
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               96, 11
               

               Conread position:
               469-620
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 58
               

               Conread position:
               475-620
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               5, 51
               

               Conread position:
               477-619
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               493-620
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               515-620
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 0
               
Show alignments to all cow chromosomes.