Cow genome map
| Conread name: | Emb1-C0005215_G03 |
| Conread position: | 3-539 |
| Cow position: | chr10:60488886-60489441 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 221 |
| Conread position: | 77-346 |
| Cow position: | chr10:15862960-15862689 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 85, 101 |
| Conread position: | 77-538 |
| Cow position: | chr10:24299549-24299077 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 96 |
| Conread position: | 77-540 |
| Cow position: | chr10:14886535-14886072 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 141 |
| Conread position: | 88-538 |
| Cow position: | chr10:49309860-49310309 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 303 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 86, 189 |
| Conread position: | 92-538 |
| Cow position: | chr10:14951046-14951487 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 155-542 |
| Cow position: | chr10:46190772-46191164 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 13 |
| Conread position: | 172-348 |
| Cow position: | chr10:39780441-39780265 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 137, 21 |
| Conread position: | 172-450 |
| Cow position: | chr10:61296707-61296983 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 172-538 |
| Cow position: | chr10:54126873-54127232 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 21 |
| Conread position: | 176-427 |
| Cow position: | chr10:29633413-29633173 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 170, 17 |
| Conread position: | 176-435 |
| Cow position: | chr10:42627878-42628144 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 68, 17 |
| Conread position: | 176-538 |
| Cow position: | chr10:38546814-38546453 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 20 |
| Conread position: | 193-535 |
| Cow position: | chr10:34318820-34318490 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 238, 16 |
| Conread position: | 194-536 |
| Cow position: | chr10:19143908-19143570 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 194-538 |
| Cow position: | chr10:31523295-31523620 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 20, 101 |
| Conread position: | 195-348 |
| Cow position: | chr10:40425125-40425276 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 195-536 |
| Cow position: | chr10:62216047-62216375 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 195-538 |
| Cow position: | chr10:25497796-25498125 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 18 |
| Conread position: | 195-538 |
| Cow position: | chr10:34685341-34685666 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 195-539 |
| Cow position: | chr10:29695679-29696020 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 111, 18 |
| Conread position: | 196-538 |
| Cow position: | chr10:62777789-62778112 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 213-540 |
| Cow position: | chr10:4499157-4499488 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 154 |
| Conread position: | 220-539 |
| Cow position: | chr10:14859445-14859755 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 234 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 211, 38 |
| Conread position: | 223-538 |
| Cow position: | chr10:32063614-32063922 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 225-536 |
| Cow position: | chr10:32650202-32650509 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 128, 187 |
| Conread position: | 226-513 |
| Cow position: | chr10:37040552-37040832 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 226-513 |
| Cow position: | chr10:62409389-62409107 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 149, 142 |
| Conread position: | 226-536 |
| Cow position: | chr10:7283217-7282915 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 226-536 |
| Cow position: | chr10:8289431-8289738 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 127, 140 |
| Conread position: | 226-536 |
| Cow position: | chr10:10581118-10581441 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 226-536 |
| Cow position: | chr10:29847155-29846842 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 131, 96 |
| Conread position: | 226-536 |
| Cow position: | chr10:37060392-37060698 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 120, 186 |
| Conread position: | 226-536 |
| Cow position: | chr10:37769288-37769590 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 192, 120 |
| Conread position: | 226-536 |
| Cow position: | chr10:38345911-38345595 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 168, 115 |
| Conread position: | 226-536 |
| Cow position: | chr10:39041843-39041537 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 103, 96 |
| Conread position: | 227-536 |
| Cow position: | chr10:38539027-38538722 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 126, 185 |
| Conread position: | 240-536 |
| Cow position: | chr10:57990486-57990196 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 113, 49 |
| Conread position: | 273-536 |
| Cow position: | chr10:123827-124086 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 80, 96 |
| Conread position: | 312-535 |
| Cow position: | chr10:42736049-42736274 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 44 |
| Conread position: | 436-545 |
| Cow position: | chr10:1938173-1938064 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.