Cow genome map

Conread name: Emb1-C0005215_G03

Conread position: 77-429
Cow position: chr12:48404004-48404353 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 118, 38

Conread position: 77-538
Cow position: chr12:2840358-2839894 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 212

Conread position: 83-538
Cow position: chr12:1867706-1868160 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 307
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 60, 140

Conread position: 137-538
Cow position: chr12:21499409-21499821 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 267
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 237

Conread position: 169-536
Cow position: chr12:20998795-20998428 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 240
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 12, 43

Conread position: 169-537
Cow position: chr12:21197158-21197527 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 250
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 220, 19

Conread position: 171-472
Cow position: chr12:22121055-22121355 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 26, 43

Conread position: 171-538
Cow position: chr12:22331957-22332312 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 6, 26

Conread position: 172-535
Cow position: chr12:2281873-2282238 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 253
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 74, 21

Conread position: 175-326
Cow position: chr12:15954346-15954199 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 175-402
Cow position: chr12:32182883-32183103 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 213, 18

Conread position: 176-422
Cow position: chr12:21058639-21058395 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 38

Conread position: 177-538
Cow position: chr12:3630542-3630886 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 230
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 11

Conread position: 181-536
Cow position: chr12:11097585-11097934 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 172, 42

Conread position: 193-344
Cow position: chr12:8310404-8310554 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 193-538
Cow position: chr12:34855815-34855466 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 232
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 8

Conread position: 195-342
Cow position: chr12:21901337-21901483 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 195-445
Cow position: chr12:45261010-45261257 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 243, 18

Conread position: 223-383
Cow position: chr12:21940891-21941049 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 226-535
Cow position: chr12:8678731-8678427 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 205
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 127, 96

Conread position: 226-536
Cow position: chr12:252670-252365 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 127, 186

Conread position: 226-536
Cow position: chr12:1401881-1402186 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 22

Conread position: 226-536
Cow position: chr12:6407255-6406954 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 127, 178

Conread position: 226-536
Cow position: chr12:22206353-22206052 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 174, 139

Conread position: 226-536
Cow position: chr12:42860428-42860122 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 116, 178

Conread position: 249-434
Cow position: chr12:9709065-9708880 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 138

Conread position: 253-536
Cow position: chr12:25101650-25101372 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 190
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 123

Conread position: 317-538
Cow position: chr12:15951780-15951558 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 113

Conread position: 431-538
Cow position: chr12:8310772-8310879 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.