Cow genome map
| Conread name: | Emb1-C0005215_G03 |
| Conread position: | 22-539 |
| Cow position: | chr13:48356281-48356808 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 77-539 |
| Cow position: | chr13:34768196-34767749 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 146 |
| Conread position: | 140-548 |
| Cow position: | chr13:33279266-33278863 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 71 |
| Conread position: | 154-552 |
| Cow position: | chr13:3655215-3654818 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 73, 225 |
| Conread position: | 170-538 |
| Cow position: | chr13:34326579-34326202 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 162, 23 |
| Conread position: | 172-536 |
| Cow position: | chr13:33337206-33336851 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 37 |
| Conread position: | 173-538 |
| Cow position: | chr13:15081056-15080698 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 177-538 |
| Cow position: | chr13:20543235-20542887 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 258 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 248, 16 |
| Conread position: | 177-538 |
| Cow position: | chr13:34692304-34692637 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 183-538 |
| Cow position: | chr13:46733204-46732870 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 248, 63 |
| Conread position: | 189-365 |
| Cow position: | chr13:34935987-34936164 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 8, 21 |
| Conread position: | 193-538 |
| Cow position: | chr13:34187553-34187214 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 193-540 |
| Cow position: | chr13:47859472-47859800 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 177, 9 |
| Conread position: | 194-538 |
| Cow position: | chr13:2909296-2908970 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 194-538 |
| Cow position: | chr13:3276301-3276633 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 19 |
| Conread position: | 194-538 |
| Cow position: | chr13:62328435-62328106 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 241 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 194, 19 |
| Conread position: | 195-538 |
| Cow position: | chr13:31831756-31832082 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 190, 18 |
| Conread position: | 195-538 |
| Cow position: | chr13:33825596-33825263 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 195-538 |
| Cow position: | chr13:34143498-34143184 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 326, 18 |
| Conread position: | 208-536 |
| Cow position: | chr13:30657804-30657489 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 123, 127 |
| Conread position: | 219-536 |
| Cow position: | chr13:4940244-4940558 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 118, 128 |
| Conread position: | 224-536 |
| Cow position: | chr13:61951353-61951663 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 24 |
| Conread position: | 226-534 |
| Cow position: | chr13:31613169-31612865 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 127, 187 |
| Conread position: | 226-536 |
| Cow position: | chr13:15521356-15521042 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 168, 45 |
| Conread position: | 226-536 |
| Cow position: | chr13:15925217-15924911 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 139, 120 |
| Conread position: | 226-536 |
| Cow position: | chr13:30302239-30302544 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 127, 35 |
| Conread position: | 226-536 |
| Cow position: | chr13:32544120-32544420 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 127, 143 |
| Conread position: | 226-536 |
| Cow position: | chr13:34043196-34042893 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 118, 128 |
| Conread position: | 227-536 |
| Cow position: | chr13:15542633-15542937 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 233-538 |
| Cow position: | chr13:54283764-54284065 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 94 |
| Conread position: | 248-536 |
| Cow position: | chr13:6668954-6668652 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 105, 0 |
Show alignments to all cow chromosomes.