Cow genome map
| Conread name: | Emb1-C0005215_G03 |
| Conread position: | 81-533 |
| Cow position: | chr14:11467517-11467944 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 301 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 330, 43 |
| Conread position: | 93-538 |
| Cow position: | chr14:35928085-35928532 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 108, 82 |
| Conread position: | 139-535 |
| Cow position: | chr14:41406794-41407209 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 284 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 37, 130 |
| Conread position: | 150-538 |
| Cow position: | chr14:44579924-44580294 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 269, 17 |
| Conread position: | 169-538 |
| Cow position: | chr14:40338682-40339060 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 24 |
| Conread position: | 170-535 |
| Cow position: | chr14:11155169-11154806 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 57, 178 |
| Conread position: | 171-421 |
| Cow position: | chr14:9044437-9044688 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 166, 38 |
| Conread position: | 172-429 |
| Cow position: | chr14:45304642-45304392 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 167, 21 |
| Conread position: | 172-537 |
| Cow position: | chr14:46083619-46083976 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 173-538 |
| Cow position: | chr14:44376414-44376788 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 77 |
| Conread position: | 173-538 |
| Cow position: | chr14:45159830-45160215 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 260 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 189-538 |
| Cow position: | chr14:35388128-35387784 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 21 |
| Conread position: | 191-538 |
| Cow position: | chr14:44225410-44225766 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 5, 23 |
| Conread position: | 193-538 |
| Cow position: | chr14:44780902-44780561 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 226, 16 |
| Conread position: | 193-538 |
| Cow position: | chr14:44783242-44782901 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 226, 16 |
| Conread position: | 193-541 |
| Cow position: | chr14:46463806-46464161 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 161, 16 |
| Conread position: | 193-543 |
| Cow position: | chr14:45833174-45833513 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 244, 20 |
| Conread position: | 194-537 |
| Cow position: | chr14:13660958-13660642 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 195-386 |
| Cow position: | chr14:42403908-42404098 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 195-538 |
| Cow position: | chr14:23691205-23690876 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 241 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 199, 18 |
| Conread position: | 195-538 |
| Cow position: | chr14:41085768-41085457 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 162, 18 |
| Conread position: | 195-538 |
| Cow position: | chr14:44856398-44856075 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 139, 18 |
| Conread position: | 208-538 |
| Cow position: | chr14:44551071-44551405 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 116 |
| Conread position: | 208-540 |
| Cow position: | chr14:44616330-44616646 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 195, 68 |
| Conread position: | 217-538 |
| Cow position: | chr14:14422969-14422657 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 29, 132 |
| Conread position: | 220-536 |
| Cow position: | chr14:50109625-50109928 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 106, 131 |
| Conread position: | 225-536 |
| Cow position: | chr14:44685070-44685396 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 14, 24 |
| Conread position: | 226-535 |
| Cow position: | chr14:16274255-16273950 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 127, 143 |
| Conread position: | 226-536 |
| Cow position: | chr14:5528109-5528415 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 127, 186 |
| Conread position: | 226-536 |
| Cow position: | chr14:7471418-7471724 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 226-536 |
| Cow position: | chr14:13302070-13302379 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 139, 120 |
| Conread position: | 226-536 |
| Cow position: | chr14:19329224-19328918 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 127, 184 |
| Conread position: | 226-536 |
| Cow position: | chr14:20781501-20781807 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 127, 186 |
| Conread position: | 226-536 |
| Cow position: | chr14:28994816-28994507 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 226-536 |
| Cow position: | chr14:37222944-37223250 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 205, 120 |
| Conread position: | 226-536 |
| Cow position: | chr14:41754915-41755222 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 226-536 |
| Cow position: | chr14:48255270-48254964 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 125, 143 |
| Conread position: | 226-538 |
| Cow position: | chr14:17684445-17684750 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 192, 120 |
| Conread position: | 226-538 |
| Cow position: | chr14:50133946-50134262 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 112, 100 |
| Conread position: | 228-545 |
| Cow position: | chr14:38533262-38532941 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 229-536 |
| Cow position: | chr14:13272299-13272611 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 376-535 |
| Cow position: | chr14:40170495-40170332 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 11 |
Show alignments to all cow chromosomes.