Cow genome map


           Conread name:
           Emb1-C0005215_G03
        

               Conread position:
               60-530
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               71-533
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 241
               

               Conread position:
               76-538
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 7
               

               Conread position:
               77-292
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               96, 139
               

               Conread position:
               77-539
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 172
               

               Conread position:
               81-513
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               94, 11
               

               Conread position:
               83-503
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               145, 38
               

               Conread position:
               83-512
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 321
               

               Conread position:
               83-538
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 56
               

               Conread position:
               83-538
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 113
               

               Conread position:
               83-541
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 85
               

               Conread position:
               88-538
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               317
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               70, 49
               

               Conread position:
               89-516
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 65
               

               Conread position:
               93-537
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               97-539
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 19
               

               Conread position:
               170-352
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               171-342
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 21
               

               Conread position:
               171-531
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               264
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               26, 39
               

               Conread position:
               171-538
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               6, 26
               

               Conread position:
               171-538
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               261
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               6, 26
               

               Conread position:
               171-538
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               256
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               26, 39
               

               Conread position:
               172-536
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               264, 17
               

               Conread position:
               172-536
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 37
               

               Conread position:
               172-538
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               172-540
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               140, 14
               

               Conread position:
               174-508
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               174-538
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 19
               

               Conread position:
               174-538
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               84, 39
               

               Conread position:
               175-537
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 18
               

               Conread position:
               175-538
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               238
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               256, 10
               

               Conread position:
               176-344
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               176-535
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               160, 17
               

               Conread position:
               189-535
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 25
               

               Conread position:
               189-537
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 21
               

               Conread position:
               189-548
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               242, 20
               

               Conread position:
               191-534
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               233
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               193-452
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               127, 16
               

               Conread position:
               193-535
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               193-538
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               212
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               193-538
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               193-538
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               233, 16
               

               Conread position:
               195-342
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               195-343
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               195-344
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               195-422
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               195-531
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               195-538
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               195-538
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               202-538
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               168, 59
               

               Conread position:
               212-538
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               176, 202
               

               Conread position:
               213-538
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               181, 32
               

               Conread position:
               213-545
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               214-536
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               13, 192
               

               Conread position:
               217-504
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               117, 80
               

               Conread position:
               219-438
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               220-535
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               82, 131
               

               Conread position:
               220-538
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               211, 28
               

               Conread position:
               226-535
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               200, 84
               

               Conread position:
               226-535
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               127, 178
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               61, 38
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               168, 98
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               139, 120
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               140, 120
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               168, 120
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               112, 34
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               205, 127
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               127, 175
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               202, 120
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               205, 120
               

               Conread position:
               226-545
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               139, 120
               

               Conread position:
               226-545
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               90, 144
               

               Conread position:
               233-536
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               120, 301
               

               Conread position:
               233-538
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               240-542
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               298, 106
               

               Conread position:
               244-538
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               188, 45
               

               Conread position:
               248-536
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               11, 18
               

               Conread position:
               249-538
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               87, 19
               

               Conread position:
               254-536
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               168, 48
               

               Conread position:
               258-538
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               80, 68
               

               Conread position:
               267-519
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               267-536
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               35, 67
               

               Conread position:
               286-539
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               103, 23
               

               Conread position:
               300-539
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               132, 65
               

               Conread position:
               312-538
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               119, 67
               

               Conread position:
               431-537
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               431-538
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               431-538
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.