Cow genome map
Conread name: | Emb1-C0005215_G03 |
Conread position: | 60-530 |
Cow position: | chr15:36627741-36627260 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 17 |
Conread position: | 71-533 |
Cow position: | chr15:38958146-38957681 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 241 |
Conread position: | 76-538 |
Cow position: | chr15:323809-324278 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 7 |
Conread position: | 77-292 |
Cow position: | chr15:27065161-27064940 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 157 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 96, 139 |
Conread position: | 77-539 |
Cow position: | chr15:21816860-21816388 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 172 |
Conread position: | 81-513 |
Cow position: | chr15:32605930-32605504 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 295 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 94, 11 |
Conread position: | 83-503 |
Cow position: | chr15:45885712-45886128 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 281 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 145, 38 |
Conread position: | 83-512 |
Cow position: | chr15:1236316-1236754 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 321 |
Conread position: | 83-538 |
Cow position: | chr15:4631033-4630562 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 56 |
Conread position: | 83-538 |
Cow position: | chr15:10479797-10479340 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 113 |
Conread position: | 83-541 |
Cow position: | chr15:11299803-11299355 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 85 |
Conread position: | 88-538 |
Cow position: | chr15:12613971-12614425 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 317 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 70, 49 |
Conread position: | 89-516 |
Cow position: | chr15:1662294-1662723 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 280 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 49, 65 |
Conread position: | 93-537 |
Cow position: | chr15:15266891-15266435 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 15 |
Conread position: | 97-539 |
Cow position: | chr15:21447979-21448427 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 19 |
Conread position: | 170-352 |
Cow position: | chr15:7232896-7233076 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 126 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 171-342 |
Cow position: | chr15:7895184-7895014 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 123 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 10, 21 |
Conread position: | 171-531 |
Cow position: | chr15:32680574-32680200 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 264 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 26, 39 |
Conread position: | 171-538 |
Cow position: | chr15:4794683-4795033 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 247 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 6, 26 |
Conread position: | 171-538 |
Cow position: | chr15:21960523-21960864 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 261 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 6, 26 |
Conread position: | 171-538 |
Cow position: | chr15:24793051-24793408 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 256 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 26, 39 |
Conread position: | 172-536 |
Cow position: | chr15:35754823-35754474 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 239 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 264, 17 |
Conread position: | 172-536 |
Cow position: | chr15:36641623-36641983 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 37 |
Conread position: | 172-538 |
Cow position: | chr15:32692532-32692912 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 16 |
Conread position: | 172-540 |
Cow position: | chr15:8407546-8407927 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 253 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 140, 14 |
Conread position: | 174-508 |
Cow position: | chr15:53338043-53338384 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 227 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 23, 36 |
Conread position: | 174-538 |
Cow position: | chr15:35734460-35734816 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 258, 19 |
Conread position: | 174-538 |
Cow position: | chr15:37391499-37391859 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 244 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 84, 39 |
Conread position: | 175-537 |
Cow position: | chr15:8098469-8098836 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 18 |
Conread position: | 175-538 |
Cow position: | chr15:35681653-35681305 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 238 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 256, 10 |
Conread position: | 176-344 |
Cow position: | chr15:6077755-6077920 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 121 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 176-535 |
Cow position: | chr15:370686-370316 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 257 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 160, 17 |
Conread position: | 189-535 |
Cow position: | chr15:35649196-35648866 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 25 |
Conread position: | 189-537 |
Cow position: | chr15:52635166-52635516 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 21 |
Conread position: | 189-548 |
Cow position: | chr15:2923515-2923876 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 242 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 242, 20 |
Conread position: | 191-534 |
Cow position: | chr15:1763089-1763437 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 233 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 193-452 |
Cow position: | chr15:16506164-16506422 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 183 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 127, 16 |
Conread position: | 193-535 |
Cow position: | chr15:4648859-4649190 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 226 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 193-538 |
Cow position: | chr15:4677529-4677857 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 212 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 193-538 |
Cow position: | chr15:6387289-6386942 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 9 |
Conread position: | 193-538 |
Cow position: | chr15:40104473-40104802 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 240 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 233, 16 |
Conread position: | 195-342 |
Cow position: | chr15:3038466-3038320 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 108 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 195-343 |
Cow position: | chr15:23158069-23157922 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 109 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 195-344 |
Cow position: | chr15:25135429-25135281 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 113 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 195-422 |
Cow position: | chr15:25790452-25790228 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 164 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 49, 18 |
Conread position: | 195-531 |
Cow position: | chr15:6278229-6277911 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 233 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 195-538 |
Cow position: | chr15:10788066-10787738 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 237 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 195-538 |
Cow position: | chr15:36647952-36648265 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 233 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 202-538 |
Cow position: | chr15:7927651-7927982 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 212 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 168, 59 |
Conread position: | 212-538 |
Cow position: | chr15:6371800-6371488 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 226 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 176, 202 |
Conread position: | 213-538 |
Cow position: | chr15:6456321-6456641 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 229 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 181, 32 |
Conread position: | 213-545 |
Cow position: | chr15:6184152-6184461 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 223 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 175, 0 |
Conread position: | 214-536 |
Cow position: | chr15:2075689-2076006 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 222 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 13, 192 |
Conread position: | 217-504 |
Cow position: | chr15:491135-490833 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 221 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 117, 80 |
Conread position: | 219-438 |
Cow position: | chr15:21623172-21623391 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 120 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 220-535 |
Cow position: | chr15:18333790-18333479 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 211 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 82, 131 |
Conread position: | 220-538 |
Cow position: | chr15:327445-327761 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 215 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 211, 28 |
Conread position: | 226-535 |
Cow position: | chr15:7836288-7836590 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 199 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 200, 84 |
Conread position: | 226-535 |
Cow position: | chr15:12422120-12421815 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 214 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 127, 178 |
Conread position: | 226-536 |
Cow position: | chr15:525804-525503 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 212 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 61, 38 |
Conread position: | 226-536 |
Cow position: | chr15:6554814-6554503 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 211 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 168, 98 |
Conread position: | 226-536 |
Cow position: | chr15:15348077-15347771 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 206 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 139, 120 |
Conread position: | 226-536 |
Cow position: | chr15:17040205-17039902 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 208 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 140, 120 |
Conread position: | 226-536 |
Cow position: | chr15:18575767-18576070 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 210 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 168, 120 |
Conread position: | 226-536 |
Cow position: | chr15:21666975-21666670 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 213 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 112, 34 |
Conread position: | 226-536 |
Cow position: | chr15:31357947-31358253 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 214 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 205, 127 |
Conread position: | 226-536 |
Cow position: | chr15:32495339-32495036 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 205 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 127, 175 |
Conread position: | 226-536 |
Cow position: | chr15:42490249-42490554 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 207 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 202, 120 |
Conread position: | 226-536 |
Cow position: | chr15:51215636-51215943 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 217 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 205, 120 |
Conread position: | 226-545 |
Cow position: | chr15:317284-316971 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 211 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 139, 120 |
Conread position: | 226-545 |
Cow position: | chr15:4384317-4384633 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 220 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 90, 144 |
Conread position: | 233-536 |
Cow position: | chr15:10887643-10887959 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 214 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 120, 301 |
Conread position: | 233-538 |
Cow position: | chr15:4960721-4961014 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 209 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 6, 16 |
Conread position: | 240-542 |
Cow position: | chr15:44068856-44069149 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 199 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 298, 106 |
Conread position: | 244-538 |
Cow position: | chr15:685223-685517 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 207 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 188, 45 |
Conread position: | 248-536 |
Cow position: | chr15:4764280-4764564 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 195 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 11, 18 |
Conread position: | 249-538 |
Cow position: | chr15:2006609-2006891 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 189 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 87, 19 |
Conread position: | 254-536 |
Cow position: | chr15:24294173-24294440 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 195 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 168, 48 |
Conread position: | 258-538 |
Cow position: | chr15:7933056-7933329 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 195 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 80, 68 |
Conread position: | 267-519 |
Cow position: | chr15:14583532-14583266 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 184 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 267-536 |
Cow position: | chr15:44827889-44828164 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 194 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 35, 67 |
Conread position: | 286-539 |
Cow position: | chr15:2011189-2011444 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 176 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 103, 23 |
Conread position: | 300-539 |
Cow position: | chr15:51799858-51800100 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 177 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 132, 65 |
Conread position: | 312-538 |
Cow position: | chr15:49676164-49676391 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 168 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 119, 67 |
Conread position: | 431-537 |
Cow position: | chr15:8001003-8000897 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 92 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 431-538 |
Cow position: | chr15:6650802-6650695 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 86 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 431-538 |
Cow position: | chr15:25789946-25789839 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 86 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.