Cow genome map


           Conread name:
           Emb1-C0005215_G03
        

               Conread position:
               3-186
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               41, 131
               

               Conread position:
               7-539
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 22
               

               Conread position:
               22-383
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               23, 163
               

               Conread position:
               29-434
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               287
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               21, 61
               

               Conread position:
               77-414
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               239
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               19, 79
               

               Conread position:
               77-434
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 149
               

               Conread position:
               77-539
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 55
               

               Conread position:
               81-538
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 56
               

               Conread position:
               83-536
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               318
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               76, 43
               

               Conread position:
               83-539
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 32
               

               Conread position:
               93-535
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               302
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               114, 76
               

               Conread position:
               159-359
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               7, 45
               

               Conread position:
               171-538
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               7, 26
               

               Conread position:
               172-384
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               156, 21
               

               Conread position:
               172-428
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               166, 21
               

               Conread position:
               172-536
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               37, 15
               

               Conread position:
               172-538
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               81, 21
               

               Conread position:
               173-513
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               14, 164
               

               Conread position:
               173-534
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               23, 30
               

               Conread position:
               173-538
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 37
               

               Conread position:
               176-343
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               176-539
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               188-548
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               254
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               197, 23
               

               Conread position:
               193-534
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               205, 21
               

               Conread position:
               193-538
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               239
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               176, 16
               

               Conread position:
               193-538
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 20
               

               Conread position:
               194-536
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               27, 15
               

               Conread position:
               194-538
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 15
               

               Conread position:
               195-533
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               195-538
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               195-538
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               199, 19
               

               Conread position:
               195-538
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               193, 20
               

               Conread position:
               207-427
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               84, 159
               

               Conread position:
               214-536
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 122
               

               Conread position:
               220-536
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               180, 125
               

               Conread position:
               226-505
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               127, 186
               

               Conread position:
               226-522
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               127, 96
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               127, 21
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               127, 71
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               127, 179
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               104, 122
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               134, 120
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               140, 154
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               130, 179
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               111, 63
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               127, 55
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               15, 10
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               156, 148
               

               Conread position:
               227-502
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               139, 119
               

               Conread position:
               227-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               126, 142
               

               Conread position:
               233-409
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               155, 22
               

               Conread position:
               251-538
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 136
               

               Conread position:
               302-536
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               54, 70
               

               Conread position:
               304-545
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 163
               

               Conread position:
               349-542
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               40, 16
               

               Conread position:
               394-538
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               19, 0
               
Show alignments to all cow chromosomes.