Cow genome map
| Conread name: | Emb1-C0005215_G03 |
| Conread position: | 8-434 |
| Cow position: | chr17:3694634-3694198 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 105 |
| Conread position: | 76-367 |
| Cow position: | chr17:4294355-4294641 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 127, 91 |
| Conread position: | 77-423 |
| Cow position: | chr17:15416963-15417313 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 87 |
| Conread position: | 78-538 |
| Cow position: | chr17:31200957-31200485 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 51 |
| Conread position: | 78-539 |
| Cow position: | chr17:153340-152875 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 197 |
| Conread position: | 83-487 |
| Cow position: | chr17:42263681-42264084 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 91, 138 |
| Conread position: | 83-538 |
| Cow position: | chr17:18302645-18302191 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 308 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 112, 92 |
| Conread position: | 91-541 |
| Cow position: | chr17:2587450-2587907 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 7, 85 |
| Conread position: | 92-535 |
| Cow position: | chr17:4080774-4081230 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 63 |
| Conread position: | 115-538 |
| Cow position: | chr17:2146383-2146794 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 59, 100 |
| Conread position: | 145-536 |
| Cow position: | chr17:2578759-2579140 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 171-536 |
| Cow position: | chr17:15370313-15370659 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 10, 39 |
| Conread position: | 172-536 |
| Cow position: | chr17:6258927-6259283 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 181, 227 |
| Conread position: | 172-536 |
| Cow position: | chr17:16860356-16859990 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 177-538 |
| Cow position: | chr17:32024947-32024614 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 208, 36 |
| Conread position: | 179-518 |
| Cow position: | chr17:20400916-20401235 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 193-351 |
| Cow position: | chr17:20024263-20024418 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 195-344 |
| Cow position: | chr17:44853654-44853507 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 195-383 |
| Cow position: | chr17:35591493-35591675 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 195-427 |
| Cow position: | chr17:455612-455379 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 193, 18 |
| Conread position: | 195-537 |
| Cow position: | chr17:2286633-2286957 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 18 |
| Conread position: | 195-538 |
| Cow position: | chr17:1284507-1284176 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 242 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 195-545 |
| Cow position: | chr17:27345064-27345396 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 213-538 |
| Cow position: | chr17:1945453-1945759 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 126, 82 |
| Conread position: | 224-535 |
| Cow position: | chr17:12671059-12670753 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 138, 33 |
| Conread position: | 226-534 |
| Cow position: | chr17:40803666-40803983 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 127, 150 |
| Conread position: | 226-536 |
| Cow position: | chr17:15322110-15322410 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 156, 100 |
| Conread position: | 226-536 |
| Cow position: | chr17:18104407-18104101 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 134, 143 |
| Conread position: | 226-538 |
| Cow position: | chr17:13857512-13857192 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 130, 95 |
| Conread position: | 240-538 |
| Cow position: | chr17:14326195-14325912 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 153 |
| Conread position: | 267-536 |
| Cow position: | chr17:11088423-11088141 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 271-538 |
| Cow position: | chr17:4059419-4059688 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 92, 48 |
| Conread position: | 431-538 |
| Cow position: | chr17:28109570-28109677 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.