Cow genome map
| Conread name: | Emb1-C0005215_G03 |
| Conread position: | 77-519 |
| Cow position: | chr18:43200115-43200564 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 96 |
| Conread position: | 83-539 |
| Cow position: | chr18:35287601-35288050 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 312 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 160, 46 |
| Conread position: | 83-540 |
| Cow position: | chr18:45958027-45958492 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 133 |
| Conread position: | 88-538 |
| Cow position: | chr18:29762815-29763275 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 314 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 71, 64 |
| Conread position: | 166-363 |
| Cow position: | chr18:55089534-55089339 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 171-538 |
| Cow position: | chr18:16660583-16660215 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 171-538 |
| Cow position: | chr18:29236194-29236568 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 175-537 |
| Cow position: | chr18:33335297-33335660 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 177-427 |
| Cow position: | chr18:30198107-30198356 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 193-382 |
| Cow position: | chr18:33268333-33268522 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 173, 9 |
| Conread position: | 193-536 |
| Cow position: | chr18:25349490-25349826 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 193-545 |
| Cow position: | chr18:54024917-54024559 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 20 |
| Conread position: | 194-474 |
| Cow position: | chr18:17993292-17993013 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 194-537 |
| Cow position: | chr18:53784955-53785267 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 195-344 |
| Cow position: | chr18:51257460-51257608 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 195-383 |
| Cow position: | chr18:2020439-2020253 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 106, 18 |
| Conread position: | 195-538 |
| Cow position: | chr18:33358326-33358657 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 190, 18 |
| Conread position: | 195-538 |
| Cow position: | chr18:43147461-43147136 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 20 |
| Conread position: | 195-539 |
| Cow position: | chr18:32293242-32293572 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 248 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 199-536 |
| Cow position: | chr18:14129747-14130081 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 15, 215 |
| Conread position: | 202-538 |
| Cow position: | chr18:35334955-35335274 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 168, 11 |
| Conread position: | 219-538 |
| Cow position: | chr18:39748073-39748371 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 112, 116 |
| Conread position: | 220-536 |
| Cow position: | chr18:16177138-16176819 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 91, 200 |
| Conread position: | 224-383 |
| Cow position: | chr18:54172597-54172437 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 224-536 |
| Cow position: | chr18:37504545-37504852 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 129, 145 |
| Conread position: | 225-536 |
| Cow position: | chr18:27838817-27838516 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 128, 151 |
| Conread position: | 226-535 |
| Cow position: | chr18:41841344-41841039 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 126, 119 |
| Conread position: | 226-536 |
| Cow position: | chr18:28974416-28974111 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 127, 150 |
| Conread position: | 226-536 |
| Cow position: | chr18:36507814-36508120 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 127, 143 |
| Conread position: | 229-543 |
| Cow position: | chr18:23797135-23797446 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 124, 137 |
| Conread position: | 254-536 |
| Cow position: | chr18:51480349-51480627 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 99, 112 |
| Conread position: | 276-538 |
| Cow position: | chr18:42245014-42244760 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 61, 56 |
| Conread position: | 422-545 |
| Cow position: | chr18:51257656-51257779 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 431-538 |
| Cow position: | chr18:17992879-17992772 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 431-538 |
| Cow position: | chr18:47719887-47719780 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.