Cow genome map
| Conread name: | Emb1-C0005215_G03 |
| Conread position: | 7-538 |
| Cow position: | chr19:32224163-32223619 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 136 |
| Conread position: | 83-522 |
| Cow position: | chr19:42649728-42649290 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 293 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 91, 64 |
| Conread position: | 108-539 |
| Cow position: | chr19:6552770-6553201 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 302 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 66, 16 |
| Conread position: | 112-518 |
| Cow position: | chr19:562346-561930 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 261 |
| Conread position: | 127-540 |
| Cow position: | chr19:36476737-36477157 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 211 |
| Conread position: | 171-535 |
| Cow position: | chr19:801435-801783 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 260 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 6, 26 |
| Conread position: | 171-536 |
| Cow position: | chr19:28582205-28581850 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 171-538 |
| Cow position: | chr19:4252917-4252564 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 26 |
| Conread position: | 171-538 |
| Cow position: | chr19:27053403-27053038 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 161 |
| Conread position: | 171-538 |
| Cow position: | chr19:32238402-32238071 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 256 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 6, 23 |
| Conread position: | 172-460 |
| Cow position: | chr19:894128-893845 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 181, 37 |
| Conread position: | 172-531 |
| Cow position: | chr19:260865-261226 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 10, 39 |
| Conread position: | 176-383 |
| Cow position: | chr19:24748386-24748601 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 176-535 |
| Cow position: | chr19:33857-34213 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 258 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 21, 10 |
| Conread position: | 179-411 |
| Cow position: | chr19:39546113-39546341 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 193-538 |
| Cow position: | chr19:76789-76440 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 16 |
| Conread position: | 193-538 |
| Cow position: | chr19:35376021-35376348 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 88, 20 |
| Conread position: | 194-538 |
| Cow position: | chr19:29209028-29209360 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 110, 19 |
| Conread position: | 195-342 |
| Cow position: | chr19:32665022-32665168 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 195-538 |
| Cow position: | chr19:416121-416439 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 195-538 |
| Cow position: | chr19:4533299-4532947 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 129, 18 |
| Conread position: | 202-535 |
| Cow position: | chr19:1031590-1031904 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 164, 11 |
| Conread position: | 226-536 |
| Cow position: | chr19:440147-439855 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 226-536 |
| Cow position: | chr19:4384963-4385276 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 79, 124 |
| Conread position: | 226-536 |
| Cow position: | chr19:33941102-33941403 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 127, 54 |
| Conread position: | 226-536 |
| Cow position: | chr19:39390012-39390313 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 127, 143 |
| Conread position: | 226-536 |
| Cow position: | chr19:40852945-40852639 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 126, 120 |
| Conread position: | 226-539 |
| Cow position: | chr19:33872729-33873040 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 127, 191 |
| Conread position: | 247-536 |
| Cow position: | chr19:10672800-10672515 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 106, 156 |
| Conread position: | 268-536 |
| Cow position: | chr19:171738-172002 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 85, 137 |
| Conread position: | 268-536 |
| Cow position: | chr19:203490-203753 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 85, 101 |
| Conread position: | 286-535 |
| Cow position: | chr19:30754714-30754964 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 37 |
| Conread position: | 305-519 |
| Cow position: | chr19:8229494-8229277 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 58 |
| Conread position: | 310-538 |
| Cow position: | chr19:378315-378092 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 6 |
Show alignments to all cow chromosomes.