Cow genome map


           Conread name:
           Emb1-C0005215_G03
        

               Conread position:
               1-539
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 23
               

               Conread position:
               49-434
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 16
               

               Conread position:
               70-535
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 151
               

               Conread position:
               76-540
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 143
               

               Conread position:
               77-538
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 96
               

               Conread position:
               77-538
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               330
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               96, 146
               

               Conread position:
               83-533
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               83-538
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               312
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               80, 135
               

               Conread position:
               83-540
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               311
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               92, 220
               

               Conread position:
               88-540
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               303
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               87, 11
               

               Conread position:
               112-531
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               98, 63
               

               Conread position:
               121-539
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               289
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               39, 31
               

               Conread position:
               169-538
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 30
               

               Conread position:
               170-548
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               159, 23
               

               Conread position:
               171-538
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               171-538
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               262
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               113, 22
               

               Conread position:
               171-539
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               258
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               172-344
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 150
               

               Conread position:
               172-434
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               199, 21
               

               Conread position:
               172-534
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               217, 30
               

               Conread position:
               172-536
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               23, 31
               

               Conread position:
               172-538
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 38
               

               Conread position:
               172-538
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 16
               

               Conread position:
               173-541
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 39
               

               Conread position:
               174-436
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               174-538
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 38
               

               Conread position:
               174-538
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               257, 23
               

               Conread position:
               176-536
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               212, 17
               

               Conread position:
               176-539
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               177-538
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 19
               

               Conread position:
               177-538
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               160, 146
               

               Conread position:
               187-538
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 28
               

               Conread position:
               188-534
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               188-538
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               257
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               98, 9
               

               Conread position:
               189-538
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 145
               

               Conread position:
               189-539
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               193-538
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               201, 20
               

               Conread position:
               193-544
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 16
               

               Conread position:
               194-538
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               194-538
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               21, 78
               

               Conread position:
               195-383
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               195-383
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               195-519
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               103, 19
               

               Conread position:
               195-538
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               195-538
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 18
               

               Conread position:
               213-538
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 172
               

               Conread position:
               213-538
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               125, 49
               

               Conread position:
               216-538
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               137, 18
               

               Conread position:
               217-538
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               226, 93
               

               Conread position:
               219-538
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 28
               

               Conread position:
               226-531
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               127, 143
               

               Conread position:
               226-531
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               15, 10
               

               Conread position:
               226-534
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               127, 176
               

               Conread position:
               226-534
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               128, 90
               

               Conread position:
               226-535
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               205, 119
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               162, 120
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               127, 140
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               127, 150
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               124, 150
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               127, 178
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               139, 120
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               127, 179
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               127, 21
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               127, 143
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               127, 22
               

               Conread position:
               228-536
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               125, 138
               

               Conread position:
               233-531
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               155, 56
               

               Conread position:
               248-536
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               90, 78
               

               Conread position:
               254-417
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 107
               

               Conread position:
               256-538
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               136, 25
               

               Conread position:
               258-538
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               136, 96
               

               Conread position:
               268-538
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               402-536
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               402-538
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               416-543
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               22, 0
               
Show alignments to all cow chromosomes.