Cow genome map
| Conread name: | Emb1-C0005215_G03 |
| Conread position: | 15-538 |
| Cow position: | chr20:28592955-28593497 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 77-458 |
| Cow position: | chr20:9954972-9954577 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 96, 278 |
| Conread position: | 88-533 |
| Cow position: | chr20:22205832-22206278 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 69, 154 |
| Conread position: | 90-545 |
| Cow position: | chr20:5575022-5575451 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 300 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 271, 80 |
| Conread position: | 120-538 |
| Cow position: | chr20:24516202-24516621 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 266 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 35, 94 |
| Conread position: | 171-538 |
| Cow position: | chr20:15064135-15064515 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 259 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 172-536 |
| Cow position: | chr20:21913722-21914074 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 179 |
| Conread position: | 172-537 |
| Cow position: | chr20:10103156-10102796 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 21 |
| Conread position: | 176-344 |
| Cow position: | chr20:3032380-3032547 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 176-426 |
| Cow position: | chr20:10846911-10846663 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 193-344 |
| Cow position: | chr20:4800204-4800054 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 193-535 |
| Cow position: | chr20:11276874-11276541 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 10 |
| Conread position: | 193-538 |
| Cow position: | chr20:13681669-13681334 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 240, 12 |
| Conread position: | 195-386 |
| Cow position: | chr20:5483633-5483818 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 195-538 |
| Cow position: | chr20:3252718-3252389 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 199, 20 |
| Conread position: | 198-531 |
| Cow position: | chr20:18316171-18315836 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 241, 11 |
| Conread position: | 205-344 |
| Cow position: | chr20:19006180-19006041 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 131, 127 |
| Conread position: | 213-516 |
| Cow position: | chr20:2791935-2791621 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 214-543 |
| Cow position: | chr20:35118680-35119002 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 134 |
| Conread position: | 225-536 |
| Cow position: | chr20:7117029-7116722 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 128, 179 |
| Conread position: | 226-534 |
| Cow position: | chr20:23798319-23798629 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 168, 104 |
| Conread position: | 226-536 |
| Cow position: | chr20:5534390-5534690 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 127, 140 |
| Conread position: | 226-536 |
| Cow position: | chr20:8005070-8004765 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 127, 186 |
| Conread position: | 226-536 |
| Cow position: | chr20:13762355-13762654 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 226-536 |
| Cow position: | chr20:23470218-23469912 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 127, 186 |
| Conread position: | 226-536 |
| Cow position: | chr20:25851543-25851242 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 206, 120 |
| Conread position: | 226-536 |
| Cow position: | chr20:27868640-27868945 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 127, 178 |
| Conread position: | 226-539 |
| Cow position: | chr20:15291491-15291799 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 127, 63 |
| Conread position: | 442-539 |
| Cow position: | chr20:9954301-9954202 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.