Cow genome map
| Conread name: | Emb1-C0005215_G03 |
| Conread position: | 81-513 |
| Cow position: | chr22:1046634-1047055 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 295 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 27, 92 |
| Conread position: | 83-386 |
| Cow position: | chr22:36272745-36273053 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 87, 138 |
| Conread position: | 83-539 |
| Cow position: | chr22:7276758-7277220 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 183 |
| Conread position: | 94-533 |
| Cow position: | chr22:308990-309414 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 290 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 104, 58 |
| Conread position: | 164-549 |
| Cow position: | chr22:37073824-37073447 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 139, 25 |
| Conread position: | 169-536 |
| Cow position: | chr22:42990511-42990866 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 197, 19 |
| Conread position: | 170-538 |
| Cow position: | chr22:5307418-5307814 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 171-383 |
| Cow position: | chr22:46636655-46636443 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 171-538 |
| Cow position: | chr22:44608970-44609338 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 215, 25 |
| Conread position: | 176-531 |
| Cow position: | chr22:3307380-3307029 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 42 |
| Conread position: | 176-538 |
| Cow position: | chr22:1285595-1285235 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 20 |
| Conread position: | 193-535 |
| Cow position: | chr22:33350534-33350860 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 196, 64 |
| Conread position: | 195-531 |
| Cow position: | chr22:42770930-42771237 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 195-538 |
| Cow position: | chr22:36534597-36534268 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 241 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 198, 17 |
| Conread position: | 195-538 |
| Cow position: | chr22:39882800-39882476 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 196-398 |
| Cow position: | chr22:10077361-10077160 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 214-536 |
| Cow position: | chr22:1294124-1293797 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 112 |
| Conread position: | 214-537 |
| Cow position: | chr22:36736157-36736469 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 215-538 |
| Cow position: | chr22:8136817-8136495 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 179, 80 |
| Conread position: | 221-545 |
| Cow position: | chr22:44474697-44475018 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 82 |
| Conread position: | 226-519 |
| Cow position: | chr22:27387002-27386709 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 168, 96 |
| Conread position: | 226-536 |
| Cow position: | chr22:526521-526214 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 192, 120 |
| Conread position: | 226-536 |
| Cow position: | chr22:561310-561005 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 127, 186 |
| Conread position: | 226-536 |
| Cow position: | chr22:19144309-19144003 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 127, 178 |
| Conread position: | 226-536 |
| Cow position: | chr22:21588727-21589027 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 139, 120 |
| Conread position: | 226-536 |
| Cow position: | chr22:44456701-44457008 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 226-536 |
| Cow position: | chr22:44933368-44933674 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 104, 97 |
| Conread position: | 229-519 |
| Cow position: | chr22:13772174-13772472 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 235-538 |
| Cow position: | chr22:45880718-45880424 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 190, 32 |
| Conread position: | 239-542 |
| Cow position: | chr22:1321030-1321323 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 57, 71 |
| Conread position: | 249-531 |
| Cow position: | chr22:15850744-15851031 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 89, 239 |
| Conread position: | 267-536 |
| Cow position: | chr22:36180557-36180839 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 86, 262 |
| Conread position: | 268-536 |
| Cow position: | chr22:37131087-37131346 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 119 |
| Conread position: | 288-538 |
| Cow position: | chr22:12732617-12732363 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 289-538 |
| Cow position: | chr22:1271057-1270810 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 50, 37 |
| Conread position: | 312-535 |
| Cow position: | chr22:6504185-6503963 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 82, 122 |
Show alignments to all cow chromosomes.