Cow genome map
| Conread name: | Emb1-C0005215_G03 |
| Conread position: | 77-343 |
| Cow position: | chr23:22879935-22879658 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 118, 96 |
| Conread position: | 83-326 |
| Cow position: | chr23:7749408-7749652 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 70 |
| Conread position: | 99-538 |
| Cow position: | chr23:16617582-16617138 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 302 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 63, 116 |
| Conread position: | 114-540 |
| Cow position: | chr23:2339686-2340107 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 293 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 37, 62 |
| Conread position: | 167-543 |
| Cow position: | chr23:15176385-15176753 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 173-538 |
| Cow position: | chr23:19333070-19332704 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 237 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 176-380 |
| Cow position: | chr23:810469-810670 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 176-534 |
| Cow position: | chr23:3012981-3013324 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 176-538 |
| Cow position: | chr23:31595829-31595480 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 253, 12 |
| Conread position: | 177-344 |
| Cow position: | chr23:7269926-7270089 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 185-545 |
| Cow position: | chr23:1025705-1025347 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 190-538 |
| Cow position: | chr23:4509450-4509803 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 5, 13 |
| Conread position: | 193-538 |
| Cow position: | chr23:5875392-5875075 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 192, 9 |
| Conread position: | 194-538 |
| Cow position: | chr23:989270-988944 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 11, 20 |
| Conread position: | 220-536 |
| Cow position: | chr23:2796173-2795867 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 96, 72 |
| Conread position: | 223-539 |
| Cow position: | chr23:2027740-2027428 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 18, 119 |
| Conread position: | 225-538 |
| Cow position: | chr23:4276357-4276655 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 146, 11 |
| Conread position: | 226-487 |
| Cow position: | chr23:11777877-11778133 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 127, 75 |
| Conread position: | 226-517 |
| Cow position: | chr23:4641231-4640949 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 166, 120 |
| Conread position: | 226-535 |
| Cow position: | chr23:2715727-2716045 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 226-535 |
| Cow position: | chr23:15220504-15220199 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 127, 186 |
| Conread position: | 226-536 |
| Cow position: | chr23:2756892-2757196 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 104, 35 |
| Conread position: | 226-536 |
| Cow position: | chr23:3882303-3882000 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 149, 40 |
| Conread position: | 226-536 |
| Cow position: | chr23:15525012-15525308 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 174, 127 |
| Conread position: | 226-536 |
| Cow position: | chr23:19488921-19489235 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 226-536 |
| Cow position: | chr23:22147888-22147564 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 136, 120 |
| Conread position: | 226-536 |
| Cow position: | chr23:28912802-28913107 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 127, 150 |
| Conread position: | 226-538 |
| Cow position: | chr23:2045428-2045725 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 226-543 |
| Cow position: | chr23:3491110-3490792 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 140, 295 |
| Conread position: | 226-545 |
| Cow position: | chr23:36031981-36031666 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 127, 186 |
| Conread position: | 227-536 |
| Cow position: | chr23:27398896-27399198 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 195, 119 |
| Conread position: | 247-445 |
| Cow position: | chr23:8981398-8981200 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 182, 138 |
| Conread position: | 264-539 |
| Cow position: | chr23:1140987-1141266 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 62 |
| Conread position: | 337-538 |
| Cow position: | chr23:22876137-22875932 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 402-538 |
| Cow position: | chr23:2765809-2765671 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 431-538 |
| Cow position: | chr23:5779496-5779389 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.