Cow genome map
| Conread name: | Emb1-C0005215_G03 |
| Conread position: | 43-384 |
| Cow position: | chr24:33432361-33432697 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 8 |
| Conread position: | 79-542 |
| Cow position: | chr24:12289405-12288933 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 94 |
| Conread position: | 83-386 |
| Cow position: | chr24:36706949-36707258 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 112, 90 |
| Conread position: | 83-515 |
| Cow position: | chr24:1446900-1447337 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 289 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 87, 29 |
| Conread position: | 83-541 |
| Cow position: | chr24:35842261-35841822 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 83, 129 |
| Conread position: | 88-535 |
| Cow position: | chr24:38635074-38635527 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 309 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 88-538 |
| Cow position: | chr24:32330670-32331128 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 82, 241 |
| Conread position: | 124-542 |
| Cow position: | chr24:32126124-32125708 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 304 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 169-477 |
| Cow position: | chr24:9544241-9544548 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 184 |
| Conread position: | 170-538 |
| Cow position: | chr24:13021091-13021454 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 181, 23 |
| Conread position: | 171-538 |
| Cow position: | chr24:12236471-12236844 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 244 |
| Conread position: | 171-538 |
| Cow position: | chr24:12798338-12797969 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 171-538 |
| Cow position: | chr24:14583534-14583881 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 174-538 |
| Cow position: | chr24:16649890-16649511 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 262 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 199, 19 |
| Conread position: | 181-538 |
| Cow position: | chr24:6335116-6335477 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 143 |
| Conread position: | 188-538 |
| Cow position: | chr24:6144796-6145142 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 9, 22 |
| Conread position: | 193-538 |
| Cow position: | chr24:6057122-6057457 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 238, 7 |
| Conread position: | 193-538 |
| Cow position: | chr24:12161321-12161661 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 10, 90 |
| Conread position: | 193-538 |
| Cow position: | chr24:39677880-39678225 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 193-539 |
| Cow position: | chr24:15392868-15392513 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 16 |
| Conread position: | 193-539 |
| Cow position: | chr24:17304137-17303787 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 194-538 |
| Cow position: | chr24:17314873-17314531 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 15 |
| Conread position: | 195-359 |
| Cow position: | chr24:37301604-37301443 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 208-538 |
| Cow position: | chr24:6351650-6351975 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 98 |
| Conread position: | 214-536 |
| Cow position: | chr24:149131-148812 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 192 |
| Conread position: | 214-538 |
| Cow position: | chr24:14391264-14390939 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 169, 94 |
| Conread position: | 214-541 |
| Cow position: | chr24:5993537-5993182 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 56 |
| Conread position: | 217-536 |
| Cow position: | chr24:14385144-14384831 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 101, 78 |
| Conread position: | 220-536 |
| Cow position: | chr24:37216187-37216507 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 107 |
| Conread position: | 226-362 |
| Cow position: | chr24:36560766-36560630 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 113, 103 |
| Conread position: | 226-536 |
| Cow position: | chr24:12132008-12131701 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 130, 150 |
| Conread position: | 226-536 |
| Cow position: | chr24:29186279-29186586 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 205, 120 |
| Conread position: | 226-543 |
| Cow position: | chr24:19832859-19833171 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 117, 131 |
| Conread position: | 227-536 |
| Cow position: | chr24:4416050-4415751 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 258-539 |
| Cow position: | chr24:40653913-40654192 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 267-536 |
| Cow position: | chr24:33932865-33933148 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 366-538 |
| Cow position: | chr24:30117116-30117297 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 40, 10 |
| Conread position: | 375-538 |
| Cow position: | chr24:35991036-35990873 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 431-539 |
| Cow position: | chr24:36560396-36560288 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 434-543 |
| Cow position: | chr24:37301395-37301286 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.