Cow genome map
| Conread name: | Emb1-C0005215_G03 |
| Conread position: | 89-538 |
| Cow position: | chr27:6006261-6006703 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 68, 10 |
| Conread position: | 102-539 |
| Cow position: | chr27:25999794-25999350 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 35 |
| Conread position: | 171-543 |
| Cow position: | chr27:26556652-26556273 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 172-536 |
| Cow position: | chr27:892552-892907 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 158, 16 |
| Conread position: | 172-538 |
| Cow position: | chr27:25805539-25805184 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 189, 21 |
| Conread position: | 189-536 |
| Cow position: | chr27:9993838-9993497 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 141, 20 |
| Conread position: | 189-539 |
| Cow position: | chr27:25116602-25116951 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 20 |
| Conread position: | 193-435 |
| Cow position: | chr27:27198472-27198240 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 20 |
| Conread position: | 193-536 |
| Cow position: | chr27:11472035-11471696 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 160, 16 |
| Conread position: | 194-418 |
| Cow position: | chr27:25003140-25002924 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 195-538 |
| Cow position: | chr27:16438707-16439031 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 213-508 |
| Cow position: | chr27:5985725-5985427 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 141, 200 |
| Conread position: | 219-384 |
| Cow position: | chr27:15331390-15331553 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 48, 28 |
| Conread position: | 219-536 |
| Cow position: | chr27:5910251-5910562 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 97, 87 |
| Conread position: | 226-493 |
| Cow position: | chr27:15639121-15638858 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 127, 143 |
| Conread position: | 226-536 |
| Cow position: | chr27:1208745-1209047 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 121 |
| Conread position: | 226-536 |
| Cow position: | chr27:14461068-14460761 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 13, 121 |
| Conread position: | 226-536 |
| Cow position: | chr27:23334553-23334858 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 127, 150 |
| Conread position: | 226-536 |
| Cow position: | chr27:26324204-26324509 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 127, 100 |
| Conread position: | 226-536 |
| Cow position: | chr27:27662283-27662589 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 127, 187 |
| Conread position: | 239-538 |
| Cow position: | chr27:21288817-21288514 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 93, 22 |
| Conread position: | 241-422 |
| Cow position: | chr27:15279222-15279039 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 39 |
| Conread position: | 247-536 |
| Cow position: | chr27:13897601-13897890 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 42, 170 |
| Conread position: | 431-538 |
| Cow position: | chr27:15278475-15278368 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 431-538 |
| Cow position: | chr27:23930554-23930447 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 431-538 |
| Cow position: | chr27:27051254-27051361 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.