Cow genome map
Conread name: | Emb1-C0005215_G03 |
Conread position: | 77-409 |
Cow position: | chr28:25785192-25785508 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 83-546 |
Cow position: | chr28:26007327-26007780 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 54 |
Conread position: | 111-538 |
Cow position: | chr28:22827366-22827805 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 41 |
Conread position: | 133-538 |
Cow position: | chr28:34648279-34648676 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 282 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 43, 92 |
Conread position: | 169-538 |
Cow position: | chr28:5812084-5812450 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 24 |
Conread position: | 171-538 |
Cow position: | chr28:24666987-24667355 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 39 |
Conread position: | 171-539 |
Cow position: | chr28:2990590-2990217 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 18 |
Conread position: | 171-543 |
Cow position: | chr28:7790856-7790493 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 256 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 26, 39 |
Conread position: | 171-543 |
Cow position: | chr28:8722083-8721696 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 273 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 26, 15 |
Conread position: | 172-536 |
Cow position: | chr28:5565239-5565600 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 237 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 24, 39 |
Conread position: | 172-536 |
Cow position: | chr28:12149704-12150061 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 241 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 39, 30 |
Conread position: | 172-536 |
Cow position: | chr28:26426879-26426533 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 235 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 193, 37 |
Conread position: | 172-536 |
Cow position: | chr28:33251697-33252083 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 252 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 24, 39 |
Conread position: | 172-538 |
Cow position: | chr28:21358394-21358761 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 38 |
Conread position: | 173-538 |
Cow position: | chr28:10464463-10464104 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 250 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 24, 28 |
Conread position: | 173-538 |
Cow position: | chr28:18089622-18089263 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 240 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 24, 37 |
Conread position: | 174-538 |
Cow position: | chr28:5796197-5796567 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 254 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 12, 38 |
Conread position: | 176-536 |
Cow position: | chr28:21325169-21325528 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 17 |
Conread position: | 176-538 |
Cow position: | chr28:10619725-10619353 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 34 |
Conread position: | 177-344 |
Cow position: | chr28:9953550-9953715 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 119 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 188-536 |
Cow position: | chr28:1504037-1504380 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 234 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 39, 21 |
Conread position: | 188-548 |
Cow position: | chr28:7816640-7816985 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 250 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 197, 5 |
Conread position: | 189-536 |
Cow position: | chr28:781794-782137 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 231 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 52, 20 |
Conread position: | 193-545 |
Cow position: | chr28:15681315-15681641 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 250 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 201, 20 |
Conread position: | 195-422 |
Cow position: | chr28:4381987-4381754 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 163 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 91, 18 |
Conread position: | 195-538 |
Cow position: | chr28:2591347-2591662 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 237 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 193, 18 |
Conread position: | 226-517 |
Cow position: | chr28:13459407-13459694 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 191 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 124, 143 |
Conread position: | 226-517 |
Cow position: | chr28:28973792-28973506 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 190 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 127, 143 |
Conread position: | 226-533 |
Cow position: | chr28:17387914-17388219 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 214 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 127, 143 |
Conread position: | 226-535 |
Cow position: | chr28:18521033-18520723 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 212 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 54, 148 |
Conread position: | 226-536 |
Cow position: | chr28:2083037-2083343 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 208 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 127, 187 |
Conread position: | 226-536 |
Cow position: | chr28:3193342-3193036 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 209 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 127, 140 |
Conread position: | 226-536 |
Cow position: | chr28:5115639-5115341 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 206 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 104, 122 |
Conread position: | 226-536 |
Cow position: | chr28:5752727-5752421 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 210 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 133, 186 |
Conread position: | 226-536 |
Cow position: | chr28:8377996-8378305 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 213 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 65, 146 |
Conread position: | 226-536 |
Cow position: | chr28:13522171-13522466 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 216 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 127, 35 |
Conread position: | 226-536 |
Cow position: | chr28:14706234-14705932 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 209 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 152, 120 |
Conread position: | 226-536 |
Cow position: | chr28:15035983-15035677 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 208 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 127, 143 |
Conread position: | 226-536 |
Cow position: | chr28:17668079-17667773 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 211 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 126, 100 |
Conread position: | 226-536 |
Cow position: | chr28:22261714-22261412 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 213 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 127, 61 |
Conread position: | 226-536 |
Cow position: | chr28:29819007-29819309 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 215 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 13, 25 |
Conread position: | 226-536 |
Cow position: | chr28:32792940-32792640 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 212 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 127, 56 |
Conread position: | 226-536 |
Cow position: | chr28:34593278-34593582 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 209 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 126, 76 |
Conread position: | 226-545 |
Cow position: | chr28:15378581-15378266 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 214 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 127, 186 |
Conread position: | 246-536 |
Cow position: | chr28:7739707-7739993 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 196 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 105, 123 |
Conread position: | 430-536 |
Cow position: | chr28:9137395-9137289 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 85 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.