Cow genome map


           Conread name:
           Emb1-C0005215_G03
        

               Conread position:
               3-538
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 80
               

               Conread position:
               7-401
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 37
               

               Conread position:
               12-548
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 16
               

               Conread position:
               43-428
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 130
               

               Conread position:
               59-545
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               138, 151
               

               Conread position:
               70-369
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 146
               

               Conread position:
               77-405
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               96, 140
               

               Conread position:
               79-536
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 5
               

               Conread position:
               83-362
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               46, 54
               

               Conread position:
               83-534
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               312
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 70
               

               Conread position:
               83-535
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 46
               

               Conread position:
               83-536
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 137
               

               Conread position:
               83-537
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               301
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               93, 180
               

               Conread position:
               83-538
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               92, 242
               

               Conread position:
               83-539
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 288
               

               Conread position:
               88-448
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               86, 64
               

               Conread position:
               88-534
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               310
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               86, 244
               

               Conread position:
               89-540
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               302
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               69, 132
               

               Conread position:
               114-434
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               77, 59
               

               Conread position:
               124-538
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 51
               

               Conread position:
               167-536
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               169-538
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 24
               

               Conread position:
               170-536
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               41, 164
               

               Conread position:
               171-538
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               171-538
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               171-538
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 6
               

               Conread position:
               172-536
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               115, 37
               

               Conread position:
               172-538
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 14
               

               Conread position:
               173-528
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 15
               

               Conread position:
               173-537
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 37
               

               Conread position:
               176-538
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 9
               

               Conread position:
               176-538
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               212, 17
               

               Conread position:
               177-364
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               175, 19
               

               Conread position:
               177-427
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               211, 25
               

               Conread position:
               189-538
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               189-538
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               189-538
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               258
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               189-539
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               245, 47
               

               Conread position:
               193-533
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               192, 16
               

               Conread position:
               193-535
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               119, 16
               

               Conread position:
               193-538
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               192, 20
               

               Conread position:
               194-508
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               103, 19
               

               Conread position:
               194-534
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               159, 8
               

               Conread position:
               194-534
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               159, 15
               

               Conread position:
               195-344
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               195-533
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               195-537
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               193, 18
               

               Conread position:
               195-538
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               199, 18
               

               Conread position:
               195-538
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               195-538
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               195-538
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               195-539
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               325, 18
               

               Conread position:
               196-538
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               208-516
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               184, 46
               

               Conread position:
               218-538
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               144, 161
               

               Conread position:
               219-536
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               134, 150
               

               Conread position:
               220-536
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               216, 42
               

               Conread position:
               226-496
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               139, 120
               

               Conread position:
               226-535
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               226-535
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               154, 120
               

               Conread position:
               226-535
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               127, 187
               

               Conread position:
               226-535
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               127, 179
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               127, 24
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               168, 38
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               127, 150
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               127, 95
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               106, 144
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               127, 63
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               127, 186
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               127, 185
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 10
               

               Conread position:
               233-538
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               161, 83
               

               Conread position:
               240-535
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               90, 21
               

               Conread position:
               268-545
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               271-536
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               144, 68
               

               Conread position:
               365-538
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               24, 47
               

               Conread position:
               431-538
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               102, 0
               
Show alignments to all cow chromosomes.