Cow genome map


           Conread name:
           Emb1-C0005215_G03
        

               Conread position:
               4-260
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               34, 169
               

               Conread position:
               27-535
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 147
               

               Conread position:
               66-252
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               128, 80
               

               Conread position:
               74-538
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 99
               

               Conread position:
               77-435
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 32
               

               Conread position:
               77-538
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 6
               

               Conread position:
               78-539
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               313
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               310, 74
               

               Conread position:
               83-539
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               306
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               91, 52
               

               Conread position:
               83-548
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               92-540
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 85
               

               Conread position:
               94-533
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               101, 14
               

               Conread position:
               94-535
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 277
               

               Conread position:
               102-537
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 68
               

               Conread position:
               125-540
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               50, 119
               

               Conread position:
               133-540
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               40, 9
               

               Conread position:
               170-549
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               176, 23
               

               Conread position:
               171-383
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               172-536
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               242
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               28, 92
               

               Conread position:
               172-538
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               213, 30
               

               Conread position:
               172-538
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               201, 21
               

               Conread position:
               173-531
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               22, 6
               

               Conread position:
               175-512
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 18
               

               Conread position:
               175-539
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 18
               

               Conread position:
               176-538
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 17
               

               Conread position:
               176-538
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 17
               

               Conread position:
               178-538
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               189-538
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               204, 157
               

               Conread position:
               189-538
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               189-545
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               177, 137
               

               Conread position:
               193-439
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               160, 16
               

               Conread position:
               194-502
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               194, 19
               

               Conread position:
               194-502
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               305, 19
               

               Conread position:
               194-536
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               144, 19
               

               Conread position:
               194-545
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               200, 19
               

               Conread position:
               195-538
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 18
               

               Conread position:
               195-538
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               190, 18
               

               Conread position:
               195-546
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               343, 20
               

               Conread position:
               213-513
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               124, 114
               

               Conread position:
               213-539
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 161
               

               Conread position:
               216-536
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               212, 129
               

               Conread position:
               216-536
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 56
               

               Conread position:
               217-538
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 192
               

               Conread position:
               220-536
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               220-536
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               119, 132
               

               Conread position:
               225-536
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               128, 22
               

               Conread position:
               226-531
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               127, 186
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               127, 149
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               139, 120
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               127, 176
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               119, 96
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               15, 176
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               61, 130
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               127, 144
               

               Conread position:
               226-539
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               127, 21
               

               Conread position:
               227-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               126, 40
               

               Conread position:
               227-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               124, 35
               

               Conread position:
               247-538
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               252-538
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               102, 45
               

               Conread position:
               266-541
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               275-538
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 89
               
Show alignments to all cow chromosomes.