Cow genome map


           Conread name:
           Emb1-C0005215_G03
        

               Conread position:
               77-409
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               96, 140
               

               Conread position:
               77-536
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 93
               

               Conread position:
               78-386
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               92, 173
               

               Conread position:
               84-545
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 28
               

               Conread position:
               89-538
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               315
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               87, 21
               

               Conread position:
               90-417
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               7, 197
               

               Conread position:
               93-536
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 13
               

               Conread position:
               93-549
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 133
               

               Conread position:
               112-428
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               60, 106
               

               Conread position:
               124-539
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 49
               

               Conread position:
               139-449
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               66, 34
               

               Conread position:
               171-369
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               171-405
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               38, 16
               

               Conread position:
               171-429
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               6, 23
               

               Conread position:
               171-536
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               172-331
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               172-342
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 42
               

               Conread position:
               172-345
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               160, 17
               

               Conread position:
               172-534
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               181, 37
               

               Conread position:
               172-536
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               55, 244
               

               Conread position:
               172-536
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               231, 37
               

               Conread position:
               172-538
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 20
               

               Conread position:
               172-539
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               283
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               115, 21
               

               Conread position:
               172-545
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 21
               

               Conread position:
               173-536
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               24, 6
               

               Conread position:
               173-538
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               176-382
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               161, 17
               

               Conread position:
               176-535
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               176-538
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               158, 10
               

               Conread position:
               176-545
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               264
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               158, 10
               

               Conread position:
               177-490
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               83, 32
               

               Conread position:
               178-539
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               193-352
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               193-510
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               62, 9
               

               Conread position:
               193-538
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 22
               

               Conread position:
               195-344
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               91, 18
               

               Conread position:
               195-469
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               190, 18
               

               Conread position:
               206-535
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               10, 128
               

               Conread position:
               208-538
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 94
               

               Conread position:
               213-538
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               28, 175
               

               Conread position:
               213-538
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               150, 133
               

               Conread position:
               221-538
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               173, 201
               

               Conread position:
               225-536
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               14, 24
               

               Conread position:
               225-536
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               82, 22
               

               Conread position:
               226-535
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               140, 69
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               127, 186
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               127, 179
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               127, 63
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               127, 143
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               127, 96
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               139, 120
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               32, 188
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               127, 187
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               127, 176
               

               Conread position:
               226-538
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 100
               

               Conread position:
               236-536
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               191, 59
               

               Conread position:
               248-535
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 37
               

               Conread position:
               248-536
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               184, 91
               

               Conread position:
               277-538
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               54, 59
               

               Conread position:
               289-538
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               48, 43
               

               Conread position:
               290-538
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               98, 195
               

               Conread position:
               336-538
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               96, 67
               

               Conread position:
               434-538
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.