Cow genome map
| Conread name: | Emb1-C0005215_G03 |
| Conread position: | 77-409 |
| Cow position: | chr7:63961414-63961075 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 96, 140 |
| Conread position: | 77-536 |
| Cow position: | chr7:47049722-47050177 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 93 |
| Conread position: | 78-386 |
| Cow position: | chr7:49445591-49445904 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 92, 173 |
| Conread position: | 84-545 |
| Cow position: | chr7:53014811-53015260 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 89-538 |
| Cow position: | chr7:49289883-49290351 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 315 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 87, 21 |
| Conread position: | 90-417 |
| Cow position: | chr7:39556921-39556589 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 7, 197 |
| Conread position: | 93-536 |
| Cow position: | chr7:60858041-60857595 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 13 |
| Conread position: | 93-549 |
| Cow position: | chr7:26883446-26883907 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 133 |
| Conread position: | 112-428 |
| Cow position: | chr7:37020988-37021298 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 60, 106 |
| Conread position: | 124-539 |
| Cow position: | chr7:20429662-20429245 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 49 |
| Conread position: | 139-449 |
| Cow position: | chr7:64394875-64395173 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 171-369 |
| Cow position: | chr7:68858935-68858739 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 171-405 |
| Cow position: | chr7:993663-993893 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 16 |
| Conread position: | 171-429 |
| Cow position: | chr7:67416465-67416727 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 23 |
| Conread position: | 171-536 |
| Cow position: | chr7:21242711-21242348 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 172-331 |
| Cow position: | chr7:27537003-27536846 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 172-342 |
| Cow position: | chr7:38535944-38536115 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 172-345 |
| Cow position: | chr7:26890145-26890317 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 172-534 |
| Cow position: | chr7:21235616-21235259 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 181, 37 |
| Conread position: | 172-536 |
| Cow position: | chr7:14140201-14139843 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 55, 244 |
| Conread position: | 172-536 |
| Cow position: | chr7:34148503-34148863 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 231, 37 |
| Conread position: | 172-538 |
| Cow position: | chr7:51013367-51013730 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 20 |
| Conread position: | 172-539 |
| Cow position: | chr7:21309597-21309974 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 283 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 115, 21 |
| Conread position: | 172-545 |
| Cow position: | chr7:48632799-48633168 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 21 |
| Conread position: | 173-536 |
| Cow position: | chr7:64242540-64242183 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 24, 6 |
| Conread position: | 173-538 |
| Cow position: | chr7:67425776-67426141 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 176-382 |
| Cow position: | chr7:35288222-35288021 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 176-535 |
| Cow position: | chr7:53990156-53990512 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 176-538 |
| Cow position: | chr7:52120675-52120324 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 158, 10 |
| Conread position: | 176-545 |
| Cow position: | chr7:29371354-29370992 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 264 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 158, 10 |
| Conread position: | 177-490 |
| Cow position: | chr7:3729469-3729774 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 32 |
| Conread position: | 178-539 |
| Cow position: | chr7:68779457-68779101 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 193-352 |
| Cow position: | chr7:21251804-21251646 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 193-510 |
| Cow position: | chr7:67653364-67653673 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 193-538 |
| Cow position: | chr7:30156885-30156533 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 22 |
| Conread position: | 195-344 |
| Cow position: | chr7:21976501-21976350 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 18 |
| Conread position: | 195-469 |
| Cow position: | chr7:68436599-68436324 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 190, 18 |
| Conread position: | 206-535 |
| Cow position: | chr7:55281366-55281037 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 10, 128 |
| Conread position: | 208-538 |
| Cow position: | chr7:20107110-20106788 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 94 |
| Conread position: | 213-538 |
| Cow position: | chr7:1358231-1357918 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 28, 175 |
| Conread position: | 213-538 |
| Cow position: | chr7:27143770-27144097 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 150, 133 |
| Conread position: | 221-538 |
| Cow position: | chr7:41489587-41489890 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 173, 201 |
| Conread position: | 225-536 |
| Cow position: | chr7:8145791-8145484 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 14, 24 |
| Conread position: | 225-536 |
| Cow position: | chr7:34485359-34485663 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 82, 22 |
| Conread position: | 226-535 |
| Cow position: | chr7:54602297-54602602 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 140, 69 |
| Conread position: | 226-536 |
| Cow position: | chr7:1373201-1372896 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 127, 186 |
| Conread position: | 226-536 |
| Cow position: | chr7:13538280-13537974 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 127, 179 |
| Conread position: | 226-536 |
| Cow position: | chr7:21128196-21127897 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 127, 63 |
| Conread position: | 226-536 |
| Cow position: | chr7:21984847-21985153 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 127, 143 |
| Conread position: | 226-536 |
| Cow position: | chr7:24809020-24808715 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 127, 96 |
| Conread position: | 226-536 |
| Cow position: | chr7:27786080-27786385 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 139, 120 |
| Conread position: | 226-536 |
| Cow position: | chr7:38396673-38396980 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 32, 188 |
| Conread position: | 226-536 |
| Cow position: | chr7:39791184-39791490 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 127, 187 |
| Conread position: | 226-536 |
| Cow position: | chr7:67798304-67798605 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 127, 176 |
| Conread position: | 226-538 |
| Cow position: | chr7:3154225-3154537 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 100 |
| Conread position: | 236-536 |
| Cow position: | chr7:46902615-46902323 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 191, 59 |
| Conread position: | 248-535 |
| Cow position: | chr7:63020319-63020608 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 37 |
| Conread position: | 248-536 |
| Cow position: | chr7:55538446-55538163 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 184, 91 |
| Conread position: | 277-538 |
| Cow position: | chr7:29469360-29469621 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 54, 59 |
| Conread position: | 289-538 |
| Cow position: | chr7:1736665-1736423 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 48, 43 |
| Conread position: | 290-538 |
| Cow position: | chr7:39109206-39108959 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 98, 195 |
| Conread position: | 336-538 |
| Cow position: | chr7:26890358-26890562 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 96, 67 |
| Conread position: | 434-538 |
| Cow position: | chr7:21976084-21975980 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.