Cow genome map


           Conread name:
           Emb1-C0005215_G03
        

               Conread position:
               3-538
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 38
               

               Conread position:
               7-539
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 133
               

               Conread position:
               8-538
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 81
               

               Conread position:
               15-180
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               26, 69
               

               Conread position:
               77-538
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 75
               

               Conread position:
               77-538
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 43
               

               Conread position:
               83-539
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 131
               

               Conread position:
               157-530
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               258
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               228, 19
               

               Conread position:
               170-493
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               258, 23
               

               Conread position:
               170-536
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 40
               

               Conread position:
               170-539
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 40
               

               Conread position:
               171-536
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               24, 39
               

               Conread position:
               171-536
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               43, 14
               

               Conread position:
               172-536
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               216, 21
               

               Conread position:
               172-537
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               213, 30
               

               Conread position:
               172-538
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 21
               

               Conread position:
               173-538
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               25, 37
               

               Conread position:
               173-540
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               129, 32
               

               Conread position:
               175-352
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               175-480
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               176-458
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               212, 17
               

               Conread position:
               176-536
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 33
               

               Conread position:
               176-537
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               253
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               179, 17
               

               Conread position:
               176-538
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               176-538
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 17
               

               Conread position:
               177-344
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               177-516
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               224, 23
               

               Conread position:
               177-537
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               211, 16
               

               Conread position:
               177-538
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               110, 22
               

               Conread position:
               189-538
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               193-452
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               143, 10
               

               Conread position:
               193-452
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               195, 16
               

               Conread position:
               195-538
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 18
               

               Conread position:
               195-538
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               193, 18
               

               Conread position:
               202-538
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               206-545
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               147, 163
               

               Conread position:
               213-538
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               150, 130
               

               Conread position:
               213-538
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 34
               

               Conread position:
               214-536
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               214-536
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 105
               

               Conread position:
               216-536
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               88, 198
               

               Conread position:
               217-538
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 52
               

               Conread position:
               225-532
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 96
               

               Conread position:
               226-512
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               140, 120
               

               Conread position:
               226-517
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               127, 108
               

               Conread position:
               226-534
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               139, 35
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               140, 67
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               127, 187
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               61, 114
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               127, 45
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               127, 186
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               120, 143
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               127, 186
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               126, 144
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               127, 140
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               139, 120
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               127, 140
               

               Conread position:
               226-536
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               174, 120
               

               Conread position:
               226-539
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               137, 120
               

               Conread position:
               226-545
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               127, 143
               

               Conread position:
               233-536
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               233-536
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               120, 38
               

               Conread position:
               248-536
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               116, 155
               

               Conread position:
               307-538
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               116, 51
               
Show alignments to all cow chromosomes.