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Cow genome map

           
Conread name:
           
Emb1-C0005215_L04
        

               
Conread position:
               
1-141
               

               
Cow position:
               
chr14:41716377-41716235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
59, 94
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr14:21534770-21534912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr14:22865630-22865772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
97, 42
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr14:29010513-29010358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr14:27865862-27866021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr14:15781659-15781821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr14:11641305-11641468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr14:46965829-46965637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 111
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr14:44848114-44848296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
168, 50
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr14:12546317-12546512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr14:19624360-19624159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr14:3005074-3004873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
87, 21
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr14:14280687-14280484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
120, 29
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr14:21230305-21230117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
118, 61
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr14:33538656-33538858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 79
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr14:19222151-19221941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr14:23055874-23055658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
117, 35
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr14:33828419-33828205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
168, 35
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:11748651-11748872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:24992082-24991860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
168, 50
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr14:8754596-8754352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr14:22381285-22381528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
168, 118
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr14:14187603-14187352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
115, 88
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr14:24683860-24684114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr14:31734583-31734849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
116, 65
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr14:38296006-38296286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
61, 103
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr14:21201561-21201850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
49, 172
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr14:3564541-3564249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr14:41325166-41325490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 108
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr14:17143841-17143527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
266, 204
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr14:19876728-19876409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
34, 216
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr14:30664271-30663952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 185
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr14:38379291-38378965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr14:22967022-22966704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
71, 83
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr14:34124907-34125238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
64, 47
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr14:40461845-40461531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
188, 35
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr14:25385621-25385943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
170, 80
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr14:9285417-9285087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
241, 50
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr14:25403674-25403997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 79
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr14:39779023-39778690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 121
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr14:18904338-18904671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 196
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr14:40269576-40269908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 47
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr14:48412607-48412950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 123
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr14:9110463-9110779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
251, 51
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr14:9308495-9308161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
69, 97
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr14:21964390-21964068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 191
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr14:34199572-34199912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 118
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr14:36554882-36555215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 202
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr14:37883649-37883985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 87
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr14:44258185-44257854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
170, 35
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr14:44878516-44878840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr14:4109204-4109569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr14:14317135-14316799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
170, 68
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr14:19129781-19129416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr14:43249855-43249501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 172
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr14:43452910-43453280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
64, 161
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr14:49021633-49021988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr14:4991261-4990906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 40
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr14:33751781-33751433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr14:19618496-19618872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 49
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr14:41479389-41479788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 191
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr14:32452526-32452111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 378
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr14:17755828-17755435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
97, 73
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr14:31130119-31130518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 59
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr14:39433991-39434395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr14:23712956-23712553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 108
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr14:8102048-8101654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 46
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr14:33247168-33247566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 65
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr14:35381858-35381443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 69
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr14:19593870-19594286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 79
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr14:6490434-6490855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 178
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr14:12961838-12961447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
124, 77
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr14:48427346-48426920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 112
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr14:48495876-48496300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
61, 134
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr14:5630431-5630015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 120
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr14:18309040-18309453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
170, 79
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr14:33714418-33714827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 68
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr14:45677493-45677078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 53
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr14:47672613-47673032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:5222017-5222439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
61, 106
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:7291065-7290645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 80
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:11507973-11508392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:13385643-13385212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 155
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:16237235-16237664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 84
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:18484971-18485409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 350
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:24922376-24921944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 244
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:24981724-24981299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 51
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:36437216-36437643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 106
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:38143843-38144264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 110
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:40230367-40230789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 186
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:41211126-41210710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 114
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr14:18941034-18941443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 104
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr14:28378634-28378202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 65
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:1716004-1715572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 205
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:6541451-6541883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
118, 60
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:8540946-8541363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 59
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:10078530-10078098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
170, 38
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:10858701-10858284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 194
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:12244112-12244538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 65
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:13810207-13809798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:14466209-14466616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 110
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:14621915-14622324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 36
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:19851651-19852092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 251
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:20640354-20640785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 124
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:20932888-20932467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 190
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:21357822-21357401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 152
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:24237091-24236666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:26116333-26115902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 197
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:26442068-26442502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 125
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:30760478-30760060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
143, 82
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:33791459-33791037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 114
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:35420487-35420918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 194
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:38921208-38920801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
118, 67
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:42330624-42330190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 123
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:48740616-48741022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
168, 29
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr14:39918493-39918893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
55, 109
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr14:3195120-3194712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr14:20010041-20010477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 82
               

               
Conread position:
               
2-155
               

               
Cow position:
               
chr14:25695649-25695496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
117, 60
               

               
Conread position:
               
2-182
               

               
Cow position:
               
chr14:6233994-6234181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr14:12484035-12484221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
167, 11
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr14:41756528-41756324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
111, 67
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr14:21284899-21284666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
60, 190
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr14:40346909-40347123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
167, 42
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr14:38355451-38355119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
169, 30
               

               
Conread position:
               
2-411
               

               
Cow position:
               
chr14:26432972-26433392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
60, 113
               

               
Conread position:
               
2-414
               

               
Cow position:
               
chr14:20712413-20712828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 259
               

               
Conread position:
               
2-419
               

               
Cow position:
               
chr14:50589121-50589541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
167, 67
               

               
Conread position:
               
2-420
               

               
Cow position:
               
chr14:20016438-20016862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 64
               

               
Conread position:
               
2-420
               

               
Cow position:
               
chr14:35498232-35498646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr14:8786280-8786690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 79
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr14:42154692-42155120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 122
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr14:36289547-36289944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 37
               

               
Conread position:
               
2-428
               

               
Cow position:
               
chr14:10609958-10609519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 81
               

               
Conread position:
               
3-179
               

               
Cow position:
               
chr14:8006070-8006238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
116, 15
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr14:5501884-5502077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr14:50027482-50027286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr14:26880537-26880750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 197
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr14:26620887-26620659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 195
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr14:12249928-12250154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
61, 80
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr14:24894028-24893808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
59, 158
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr14:41128161-41127935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 82
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr14:15518109-15518346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr14:49671332-49671025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 89
               

               
Conread position:
               
3-317
               

               
Cow position:
               
chr14:49421543-49421853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chr14:10697258-10697566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
116, 77
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr14:34355434-34355776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
166, 44
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr14:28090704-28091030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 199
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr14:46124995-46125339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 167
               

               
Conread position:
               
3-339
               

               
Cow position:
               
chr14:35018488-35018823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 116
               

               
Conread position:
               
3-339
               

               
Cow position:
               
chr14:50055669-50055329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
62, 205
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr14:20600649-20600298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
167, 60
               

               
Conread position:
               
3-363
               

               
Cow position:
               
chr14:37131926-37131570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 112
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr14:19207132-19206774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 165
               

               
Conread position:
               
3-378
               

               
Cow position:
               
chr14:18657331-18657715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
3-387
               

               
Cow position:
               
chr14:38549073-38548681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 214
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr14:25682213-25681788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 201
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr14:44794177-44793757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr14:6599686-6600106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 59
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr14:41749495-41749910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 63
               

               
Conread position:
               
3-423
               

               
Cow position:
               
chr14:11043222-11043649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 179
               

               
Conread position:
               
3-423
               

               
Cow position:
               
chr14:23090110-23090536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
82, 66
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr14:17554217-17554648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
59, 198
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr14:18345463-18345880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr14:22989302-22988879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 96
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr14:23682532-23682111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
79, 110
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr14:39769962-39770381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 120
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr14:12613835-12614022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
161, 40
               

               
Conread position:
               
4-227
               

               
Cow position:
               
chr14:6419045-6419259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
165, 40
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr14:19372610-19372263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 110
               

               
Conread position:
               
4-424
               

               
Cow position:
               
chr14:38168950-38168548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
6-183
               

               
Cow position:
               
chr14:17013773-17013589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
6-411
               

               
Cow position:
               
chr14:50040506-50040110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
113, 179
               

               
Conread position:
               
6-414
               

               
Cow position:
               
chr14:45052703-45052292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
111, 72
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr14:13006770-13006540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
107, 50
               

               
Conread position:
               
7-424
               

               
Cow position:
               
chr14:48492520-48492955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 194
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr14:26185966-26185658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 50
               

               
Conread position:
               
9-338
               

               
Cow position:
               
chr14:10702571-10702908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
9-411
               

               
Cow position:
               
chr14:1731712-1731302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
98, 74
               

               
Conread position:
               
11-338
               

               
Cow position:
               
chr14:33309249-33309572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
57, 92
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chr14:7482314-7482099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
50, 42
               

               
Conread position:
               
12-240
               

               
Cow position:
               
chr14:32470887-32470656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 187
               

               
Conread position:
               
12-331
               

               
Cow position:
               
chr14:40433180-40432864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr14:44742122-44742511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
48, 186
               

               
Conread position:
               
12-411
               

               
Cow position:
               
chr14:13582501-13582898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
156, 60
               

               
Conread position:
               
12-413
               

               
Cow position:
               
chr14:26940964-26941366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
12-422
               

               
Cow position:
               
chr14:2937906-2937487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
58, 103
               

               
Conread position:
               
12-425
               

               
Cow position:
               
chr14:28114924-28115348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 103
               

               
Conread position:
               
12-427
               

               
Cow position:
               
chr14:50363064-50362633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 141
               

               
Conread position:
               
13-338
               

               
Cow position:
               
chr14:12035664-12035341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 8
               

               
Conread position:
               
13-356
               

               
Cow position:
               
chr14:34984122-34983780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
70, 100
               

               
Conread position:
               
13-419
               

               
Cow position:
               
chr14:48689787-48689377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 188
               

               
Conread position:
               
13-422
               

               
Cow position:
               
chr14:49929472-49929899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 232
               

               
Conread position:
               
13-424
               

               
Cow position:
               
chr14:14326846-14327281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
38, 132
               

               
Conread position:
               
13-424
               

               
Cow position:
               
chr14:24387709-24387295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
49, 102
               

               
Conread position:
               
13-424
               

               
Cow position:
               
chr14:48446902-48447321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 178
               

               
Conread position:
               
14-338
               

               
Cow position:
               
chr14:28004237-28003899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
48, 234
               

               
Conread position:
               
15-424
               

               
Cow position:
               
chr14:40253479-40253062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 68
               

               
Conread position:
               
16-351
               

               
Cow position:
               
chr14:27591700-27592038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
84, 96
               

               
Conread position:
               
16-376
               

               
Cow position:
               
chr14:6175838-6175494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
56, 187
               

               
Conread position:
               
18-152
               

               
Cow position:
               
chr14:6636639-6636777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
19-208
               

               
Cow position:
               
chr14:35022154-35021954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 28
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr14:29030080-29029790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
135, 33
               

               
Conread position:
               
20-155
               

               
Cow position:
               
chr14:24839924-24840060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
20-239
               

               
Cow position:
               
chr14:20483216-20483426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
150, 48
               

               
Conread position:
               
20-337
               

               
Cow position:
               
chr14:1977828-1978141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
21-371
               

               
Cow position:
               
chr14:20467854-20468197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
37, 169
               

               
Conread position:
               
21-414
               

               
Cow position:
               
chr14:11846751-11846351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 175
               

               
Conread position:
               
22-334
               

               
Cow position:
               
chr14:23107578-23107258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
23-227
               

               
Cow position:
               
chr14:23762118-23761912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
133, 16
               

               
Conread position:
               
24-240
               

               
Cow position:
               
chr14:33643544-33643750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
25-402
               

               
Cow position:
               
chr14:14417260-14417631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
25-424
               

               
Cow position:
               
chr14:27355649-27355238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
26-240
               

               
Cow position:
               
chr14:21230853-21230633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 194
               

               
Conread position:
               
26-240
               

               
Cow position:
               
chr14:34697873-34697660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 172
               

               
Conread position:
               
26-294
               

               
Cow position:
               
chr14:28992679-28992406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
36, 145
               

               
Conread position:
               
26-294
               

               
Cow position:
               
chr14:47588584-47588313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 171
               

               
Conread position:
               
26-318
               

               
Cow position:
               
chr14:12167168-12167460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
145, 43
               

               
Conread position:
               
26-421
               

               
Cow position:
               
chr14:37397455-37397048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 149
               

               
Conread position:
               
27-424
               

               
Cow position:
               
chr14:13043005-13042603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 100
               

               
Conread position:
               
28-318
               

               
Cow position:
               
chr14:45279634-45279924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
143, 55
               

               
Conread position:
               
28-411
               

               
Cow position:
               
chr14:16760642-16760256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
34, 87
               

               
Conread position:
               
28-421
               

               
Cow position:
               
chr14:16352565-16352205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
32-410
               

               
Cow position:
               
chr14:12520070-12520446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 106
               

               
Conread position:
               
33-203
               

               
Cow position:
               
chr14:22952760-22952929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
138, 34
               

               
Conread position:
               
33-240
               

               
Cow position:
               
chr14:5366121-5365911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
33-387
               

               
Cow position:
               
chr14:37447240-37447587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
138, 7
               

               
Conread position:
               
33-422
               

               
Cow position:
               
chr14:20301769-20302158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
46, 159
               

               
Conread position:
               
33-424
               

               
Cow position:
               
chr14:1802874-1803275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 165
               

               
Conread position:
               
33-424
               

               
Cow position:
               
chr14:12324662-12324251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
83, 188
               

               
Conread position:
               
34-411
               

               
Cow position:
               
chr14:14948973-14949357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 156
               

               
Conread position:
               
35-335
               

               
Cow position:
               
chr14:26190860-26191169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 110
               

               
Conread position:
               
35-422
               

               
Cow position:
               
chr14:26859485-26859891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
37-337
               

               
Cow position:
               
chr14:26490510-26490812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 65
               

               
Conread position:
               
38-206
               

               
Cow position:
               
chr14:37435063-37435236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
58, 115
               

               
Conread position:
               
39-190
               

               
Cow position:
               
chr14:28924617-28924463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
42-227
               

               
Cow position:
               
chr14:14581094-14580912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
120, 99
               

               
Conread position:
               
45-424
               

               
Cow position:
               
chr14:20826698-20826335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
217, 24
               

               
Conread position:
               
46-423
               

               
Cow position:
               
chr14:30605697-30606072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
119, 23
               

               
Conread position:
               
46-424
               

               
Cow position:
               
chr14:25979488-25979114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
119, 36
               

               
Conread position:
               
48-428
               

               
Cow position:
               
chr14:29592505-29592876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
122, 18
               

               
Conread position:
               
52-363
               

               
Cow position:
               
chr14:15825503-15825189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
52-422
               

               
Cow position:
               
chr14:15313771-15313404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
64, 5
               

               
Conread position:
               
52-424
               

               
Cow position:
               
chr14:7480230-7479850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
116, 5
               

               
Conread position:
               
52-424
               

               
Cow position:
               
chr14:25986734-25986356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 5
               

               
Conread position:
               
53-424
               

               
Cow position:
               
chr14:2974878-2975242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 112
               

               
Conread position:
               
55-366
               

               
Cow position:
               
chr14:19394575-19394268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
114, 132
               

               
Conread position:
               
56-359
               

               
Cow position:
               
chr14:33830511-33830212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
113, 138
               

               
Conread position:
               
56-422
               

               
Cow position:
               
chr14:27338558-27338184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
60, 141
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr14:16489789-16490052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
57-419
               

               
Cow position:
               
chr14:25002246-25001881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
114, 23
               

               
Conread position:
               
57-422
               

               
Cow position:
               
chr14:8945871-8946237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
57-424
               

               
Cow position:
               
chr14:5234669-5235035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
185, 110
               

               
Conread position:
               
57-424
               

               
Cow position:
               
chr14:7800124-7799761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
113, 24
               

               
Conread position:
               
58-387
               

               
Cow position:
               
chr14:7420842-7421177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
110, 11
               

               
Conread position:
               
58-422
               

               
Cow position:
               
chr14:47276490-47276855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 117
               

               
Conread position:
               
58-424
               

               
Cow position:
               
chr14:15997555-15997908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
111, 78
               

               
Conread position:
               
59-352
               

               
Cow position:
               
chr14:16256977-16256676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
118, 60
               

               
Conread position:
               
60-360
               

               
Cow position:
               
chr14:48961789-48961494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 136
               

               
Conread position:
               
61-363
               

               
Cow position:
               
chr14:27275377-27275069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
65-235
               

               
Cow position:
               
chr14:24991328-24991157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
56, 137
               

               
Conread position:
               
65-422
               

               
Cow position:
               
chr14:27823640-27823278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
66-338
               

               
Cow position:
               
chr14:1868181-1868452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 10
               

               
Conread position:
               
66-409
               

               
Cow position:
               
chr14:26628318-26628667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
69-227
               

               
Cow position:
               
chr14:41966441-41966287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
100, 42
               

               
Conread position:
               
70-169
               

               
Cow position:
               
chr14:8936448-8936549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
71-358
               

               
Cow position:
               
chr14:40283819-40283529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
71-411
               

               
Cow position:
               
chr14:42247187-42246861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
173, 14
               

               
Conread position:
               
71-424
               

               
Cow position:
               
chr14:38747862-38747523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
72-202
               

               
Cow position:
               
chr14:50518776-50518908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
97, 39
               

               
Conread position:
               
72-424
               

               
Cow position:
               
chr14:46973634-46973285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
99, 10
               

               
Conread position:
               
73-388
               

               
Cow position:
               
chr14:24608163-24607841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
75-421
               

               
Cow position:
               
chr14:15492791-15492438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 34
               

               
Conread position:
               
76-414
               

               
Cow position:
               
chr14:12855610-12855938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
76-424
               

               
Cow position:
               
chr14:19321312-19321666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
95, 51
               

               
Conread position:
               
77-232
               

               
Cow position:
               
chr14:38673438-38673594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
81-387
               

               
Cow position:
               
chr14:4202904-4203216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
82-410
               

               
Cow position:
               
chr14:21933153-21933487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
88, 29
               

               
Conread position:
               
82-424
               

               
Cow position:
               
chr14:48838783-48838435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
84-424
               

               
Cow position:
               
chr14:45276098-45275758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 176
               

               
Conread position:
               
88-345
               

               
Cow position:
               
chr14:1859432-1859688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 181
               

               
Conread position:
               
88-424
               

               
Cow position:
               
chr14:33456858-33457201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
94-424
               

               
Cow position:
               
chr14:33341934-33341593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 182
               

               
Conread position:
               
95-424
               

               
Cow position:
               
chr14:12511726-12512047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
59, 102
               

               
Conread position:
               
99-338
               

               
Cow position:
               
chr14:46998217-46997970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
105-422
               

               
Cow position:
               
chr14:20556798-20556480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
105-424
               

               
Cow position:
               
chr14:49817534-49817842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
106-422
               

               
Cow position:
               
chr14:26222910-26222582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
106-424
               

               
Cow position:
               
chr14:28784326-28784644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
107-424
               

               
Cow position:
               
chr14:26654968-26655293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
109-344
               

               
Cow position:
               
chr14:45718104-45718338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
60, 85
               

               
Conread position:
               
109-359
               

               
Cow position:
               
chr14:42437188-42436935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
109-421
               

               
Cow position:
               
chr14:15503998-15504310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
95, 55
               

               
Conread position:
               
109-424
               

               
Cow position:
               
chr14:35503526-35503207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 243
               

               
Conread position:
               
110-424
               

               
Cow position:
               
chr14:23424418-23424109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 85
               

               
Conread position:
               
110-424
               

               
Cow position:
               
chr14:23443179-23442870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 85
               

               
Conread position:
               
111-424
               

               
Cow position:
               
chr14:22941562-22941896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
112-428
               

               
Cow position:
               
chr14:40754085-40754404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
59, 239
               

               
Conread position:
               
113-415
               

               
Cow position:
               
chr14:30757000-30756694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 86
               

               
Conread position:
               
114-421
               

               
Cow position:
               
chr14:12954226-12954528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
117-406
               

               
Cow position:
               
chr14:20954840-20954544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
119-421
               

               
Cow position:
               
chr14:11056588-11056886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
48, 74
               

               
Conread position:
               
119-422
               

               
Cow position:
               
chr14:35532884-35533194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
119-424
               

               
Cow position:
               
chr14:7036203-7036516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 116
               

               
Conread position:
               
120-423
               

               
Cow position:
               
chr14:42419124-42419434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
123-422
               

               
Cow position:
               
chr14:11470000-11470304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
126-422
               

               
Cow position:
               
chr14:28153601-28153899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
132-424
               

               
Cow position:
               
chr14:1708518-1708815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
133-424
               

               
Cow position:
               
chr14:40474699-40474406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
141-419
               

               
Cow position:
               
chr14:11285705-11285430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
150-424
               

               
Cow position:
               
chr14:12072831-12073112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
157-422
               

               
Cow position:
               
chr14:23103885-23104150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 118
               

               
Conread position:
               
157-424
               

               
Cow position:
               
chr14:11643145-11643402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
161-428
               

               
Cow position:
               
chr14:34775638-34775909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
168-421
               

               
Cow position:
               
chr14:1796290-1796044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
101, 31
               

               
Conread position:
               
168-424
               

               
Cow position:
               
chr14:29965117-29964861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
101, 12
               

               
Conread position:
               
168-424
               

               
Cow position:
               
chr14:36442917-36443173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
168-424
               

               
Cow position:
               
chr14:47170254-47170506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
94, 28
               

               
Conread position:
               
168-424
               

               
Cow position:
               
chr14:49488061-49487808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
168-425
               

               
Cow position:
               
chr14:8923483-8923744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
169-422
               

               
Cow position:
               
chr14:33546255-33546513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
169-422
               

               
Cow position:
               
chr14:44713515-44713262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 14
               

               
Conread position:
               
169-424
               

               
Cow position:
               
chr14:7198601-7198339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
176-424
               

               
Cow position:
               
chr14:21224732-21224487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
85, 121
               

               
Conread position:
               
181-424
               

               
Cow position:
               
chr14:10852119-10851871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
185-424
               

               
Cow position:
               
chr14:23419882-23419637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
190-424
               

               
Cow position:
               
chr14:23078713-23078948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
79, 5
               

               
Conread position:
               
193-422
               

               
Cow position:
               
chr14:14812143-14812377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
193-422
               

               
Cow position:
               
chr14:28924246-28924011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
193-424
               

               
Cow position:
               
chr14:13731021-13731254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 168
               

               
Conread position:
               
197-420
               

               
Cow position:
               
chr14:20467003-20466784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
140, 36
               

               
Conread position:
               
199-424
               

               
Cow position:
               
chr14:4848418-4848194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 44
               

               
Conread position:
               
200-427
               

               
Cow position:
               
chr14:10706944-10706720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
207-424
               

               
Cow position:
               
chr14:11577131-11576913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
62, 93
               

               
Conread position:
               
213-424
               

               
Cow position:
               
chr14:14224625-14224411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 202
               

               
Conread position:
               
213-424
               

               
Cow position:
               
chr14:15469925-15470142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
219-422
               

               
Cow position:
               
chr14:20245118-20245322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
234-422
               

               
Cow position:
               
chr14:18412553-18412748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
246-421
               

               
Cow position:
               
chr14:24785682-24785506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
246-422
               

               
Cow position:
               
chr14:11079476-11079301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 102
               

               
Conread position:
               
268-421
               

               
Cow position:
               
chr14:18270362-18270207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
268-422
               

               
Cow position:
               
chr14:22230907-22231062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
268-422
               

               
Cow position:
               
chr14:50519178-50519331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
268-424
               

               
Cow position:
               
chr14:25912652-25912498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
268-424
               

               
Cow position:
               
chr14:27364581-27364421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
268-424
               

               
Cow position:
               
chr14:27653165-27653005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
268-424
               

               
Cow position:
               
chr14:31342213-31342053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
268-424
               

               
Cow position:
               
chr14:37504516-37504356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
273-424
               

               
Cow position:
               
chr14:10440924-10440764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
273-424
               

               
Cow position:
               
chr14:40107119-40107268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
26, 36
               

               
Conread position:
               
275-396
               

               
Cow position:
               
chr14:25277764-25277645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
275-408
               

               
Cow position:
               
chr14:13515995-13516132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
275-408
               

               
Cow position:
               
chr14:21593009-21593142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chr14:7127852-7127704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chr14:8949644-8949495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 52
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chr14:19774225-19774373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 92
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chr14:32784121-32784274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chr14:36151319-36151168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
275-425
               

               
Cow position:
               
chr14:11604876-11604727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
64, 123
               

               
Conread position:
               
277-414
               

               
Cow position:
               
chr14:12138009-12137871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 116
               

               
Conread position:
               
277-424
               

               
Cow position:
               
chr14:5668126-5668277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
278-422
               

               
Cow position:
               
chr14:5044662-5044522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
278-424
               

               
Cow position:
               
chr14:21968518-21968664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
278-424
               

               
Cow position:
               
chr14:36559235-36559382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 114
               
Show alignments to all cow chromosomes.