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Cow genome map

           
Conread name:
           
Emb1-C0005215_L04
        

               
Conread position:
               
1-145
               

               
Cow position:
               
chr22:13720755-13720610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr22:2105487-2105332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr22:11987447-11987294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
61, 86
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr22:28938136-28937976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr22:31194843-31195000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 112
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr22:6204524-6204357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
115, 87
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr22:38549563-38549729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr22:44386628-44386456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
168, 15
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr22:14376623-14376452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
118, 46
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr22:34665821-34666007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
52, 57
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr22:12946395-12946205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr22:14601284-14601468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
162, 56
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr22:30472816-30473018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
168, 75
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr22:2141584-2141784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr22:30689401-30689621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr22:35533586-35533359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
155, 40
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr22:26106828-26107055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 117
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr22:29256545-29256314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:2701998-2702228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
79, 197
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr22:1822105-1821872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
83, 198
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr22:6360718-6360486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
168, 89
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr22:25341790-25342017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 195
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr22:32952248-32952478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
166, 88
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr22:18654283-18654041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr22:30954809-30955043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
209, 86
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr22:12736097-12736333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
167, 184
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr22:25630001-25629740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
48, 202
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr22:39494433-39494173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
61, 190
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr22:26097844-26097559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
169, 56
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr22:31593091-31592782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 83
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr22:35753536-35753235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr22:43292131-43291827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 202
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr22:1975382-1975696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 110
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr22:8341046-8341368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
137, 68
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr22:5337828-5337505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr22:845672-846005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
169, 110
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr22:30818957-30818620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
81, 104
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr22:23403871-23403535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 63
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr22:590112-590447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
170, 40
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr22:5282277-5282605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
114, 72
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr22:8116312-8115980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
163, 56
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr22:12968300-12967961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 56
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr22:17813998-17814340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 65
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr22:24611306-24610986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 63
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr22:25943251-25943583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 65
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr22:26184391-26184053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 35
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr22:34606360-34606698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
118, 23
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr22:44180363-44180701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 82
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr22:24176104-24175781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
112, 56
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr22:34476231-34475883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 45
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr22:34750447-34750788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 111
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr22:1279616-1279269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr22:1266169-1265806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr22:16044659-16044287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr22:22155370-22155732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
64, 115
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr22:28665039-28665411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 211
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr22:32189069-32188725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
177, 59
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr22:37029833-37029479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr22:16812393-16812032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
115, 136
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr22:2627347-2627714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 16
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr22:26316243-26316589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 67
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr22:32651277-32651624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
110, 56
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr22:27329114-27328751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
117, 68
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr22:3950011-3950401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 207
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr22:3964955-3965337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 84
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr22:17295161-17294786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 111
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr22:2502607-2502984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 68
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr22:3908689-3909091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr22:13688342-13687954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
126, 263
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr22:11038044-11038424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
168, 65
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr22:38930744-38930331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 195
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr22:41982945-41982543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 110
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr22:14366184-14365775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
67, 114
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr22:45513751-45513345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
94, 72
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr22:7882320-7882732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr22:10631142-10631570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 214
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr22:28146454-28146864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 137
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr22:31646264-31646665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 82
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr22:28058273-28057858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 18
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr22:29013647-29014068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 188
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr22:4043703-4044108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
185, 54
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr22:18025787-18025369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr22:29641880-29642297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 51
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr22:16251797-16251375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr22:59376-59804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 102
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr22:4108969-4108537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 158
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr22:14245655-14245247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
193, 67
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr22:39472606-39472170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 110
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr22:4535557-4535130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
61, 79
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr22:10937063-10936657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr22:17152449-17152880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 41
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr22:20626611-20627025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 110
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr22:21012160-21012577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 110
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr22:25237371-25236937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
115, 68
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr22:37201627-37202040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr22:1326188-1326611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 35
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr22:4994151-4993723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
61, 114
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr22:5467599-5467172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 54
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr22:8882795-8883203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 17
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr22:13866415-13866861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr22:14091462-14091028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
106, 193
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr22:15960001-15959581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
59, 34
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr22:16273400-16273834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 202
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr22:18926121-18926549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 114
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr22:23759242-23758816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr22:32661282-32661707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 58
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr22:11686174-11685743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 348
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr22:14179062-14178638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 123
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr22:16532850-16533266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 99
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr22:34441864-34441439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr22:40048333-40048752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 68
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr22:40121108-40120679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 161
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:534263-534684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 198
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:644991-644586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 81
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:1309958-1309543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 119
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:1654426-1653991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
44, 200
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:3842397-3842812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
61, 106
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:4061173-4060753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 43
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:4563132-4563551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 95
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:5596021-5595613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 79
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:6419366-6419799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
87, 175
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:6493940-6494370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
82, 111
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:7153660-7154070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
107, 67
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:8412294-8412725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 114
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:10122158-10122563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 113
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:10294820-10295223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 68
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:10339343-10338911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 104
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:11146672-11147104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
60, 303
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:12572973-12573400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 115
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:13286214-13286643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 251
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:13957880-13957450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 123
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:14143336-14142929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
168, 56
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:15049936-15050372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
139, 61
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:15490429-15490850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 107
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:17950187-17949782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
258, 68
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:18196280-18196705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:18258998-18259411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 65
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:21746410-21746833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:21890590-21890171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 121
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:25743182-25742771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 109
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:26786123-26786553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 93
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:27171488-27171074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 120
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:28071324-28071753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 106
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:29955229-29954819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:33448305-33447883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 58
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:36560890-36560455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 6
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:37139217-37139623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
116, 26
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:37145117-37145515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
115, 65
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:38439388-38438963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 114
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:40349120-40349536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 110
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:40374376-40374801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 203
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr22:40386942-40387346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 67
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr22:16327275-16327685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
220, 68
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr22:41898677-41898253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr22:31870480-31870057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 46
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr22:6215784-6215357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 42
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr22:10302780-10303214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 203
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr22:25222132-25221704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chr22:7913248-7913461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
52, 70
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr22:30712522-30712761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 196
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr22:7838376-7838656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
167, 67
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr22:2148344-2148676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
70, 113
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr22:15337885-15338221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 201
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr22:34712485-34712833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 49
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr22:4017246-4017609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 111
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr22:8303079-8302666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr22:10532265-10532679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
60, 183
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr22:13670399-13669981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 77
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr22:39508263-39507848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 40
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr22:864747-864337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 109
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr22:3301553-3301143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 67
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr22:26134464-26134028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 191
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr22:3251219-3250785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 15
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr22:4076128-4075690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 163
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr22:5290614-5291050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr22:14691205-14690764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 198
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr22:27577504-27577940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
2-425
               

               
Cow position:
               
chr22:43812647-43812245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 48
               

               
Conread position:
               
3-155
               

               
Cow position:
               
chr22:1710346-1710496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
112, 73
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr22:19376482-19376663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr22:226671-226454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr22:6123124-6122903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
166, 63
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr22:14602623-14602386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
150, 66
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr22:295165-294893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 212
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr22:15032073-15031797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr22:31213345-31213657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chr22:27480663-27480990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
80, 200
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr22:34398683-34398358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 61
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr22:13840909-13841247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
97, 77
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr22:26658827-26659150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 108
               

               
Conread position:
               
3-339
               

               
Cow position:
               
chr22:7851731-7852073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 196
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr22:30049801-30049451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 112
               

               
Conread position:
               
3-362
               

               
Cow position:
               
chr22:21295953-21295593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
3-362
               

               
Cow position:
               
chr22:23176678-23176310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 163
               

               
Conread position:
               
3-375
               

               
Cow position:
               
chr22:22222964-22223337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 80
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr22:1590792-1591177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr22:4119796-4119404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 111
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr22:30515024-30515446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 116
               

               
Conread position:
               
3-409
               

               
Cow position:
               
chr22:20862977-20862584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
114, 54
               

               
Conread position:
               
3-420
               

               
Cow position:
               
chr22:6600914-6600484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
56, 401
               

               
Conread position:
               
3-421
               

               
Cow position:
               
chr22:16620945-16621384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 66
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr22:8733551-8733153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 54
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr22:22022658-22023097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 158
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr22:22861140-22860718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 84
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr22:27818775-27819190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
116, 70
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr22:38940177-38939759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 184
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr22:41045142-41044716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
106, 66
               

               
Conread position:
               
3-423
               

               
Cow position:
               
chr22:13735493-13735087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
3-423
               

               
Cow position:
               
chr22:32892467-32892890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
54, 120
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:4583343-4583756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 26
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:6610582-6610163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 132
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:6754482-6754068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 169
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:7081797-7082224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
58, 193
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:11130643-11131064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 57
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:11613193-11613621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:12682020-12681600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 15
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:13702194-13701765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
35, 230
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:14371939-14372362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 205
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:17852851-17852443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:18838020-18838445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
14, 82
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:19340971-19341389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
58, 187
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:23833067-23833482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
109, 56
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:25206198-25205769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 187
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:25246681-25247104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 160
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:32326573-32326994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:34616081-34616510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
168, 57
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr22:36563251-36562831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
67, 185
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr22:23181264-23180846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
164, 108
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr22:24584271-24583873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
309, 59
               

               
Conread position:
               
4-227
               

               
Cow position:
               
chr22:14002251-14002462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
113, 64
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr22:37817530-37817797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
112, 65
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr22:13769252-13769606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
167, 53
               

               
Conread position:
               
4-365
               

               
Cow position:
               
chr22:23856821-23857181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 108
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr22:27825609-27826040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 185
               

               
Conread position:
               
4-424
               

               
Cow position:
               
chr22:5016281-5016685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 179
               

               
Conread position:
               
4-424
               

               
Cow position:
               
chr22:7967470-7967891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 110
               

               
Conread position:
               
4-424
               

               
Cow position:
               
chr22:15568245-15567827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 111
               

               
Conread position:
               
4-424
               

               
Cow position:
               
chr22:17089053-17089489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
172, 79
               

               
Conread position:
               
4-424
               

               
Cow position:
               
chr22:43397790-43398194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 65
               

               
Conread position:
               
4-425
               

               
Cow position:
               
chr22:44717483-44717916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 97
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr22:25361264-25361669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
165, 77
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr22:11697434-11697002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 245
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr22:46626598-46626181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
181, 47
               

               
Conread position:
               
7-245
               

               
Cow position:
               
chr22:66215-66447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
161, 71
               

               
Conread position:
               
7-402
               

               
Cow position:
               
chr22:47555620-47556026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
7-408
               

               
Cow position:
               
chr22:47741192-47741595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
7-423
               

               
Cow position:
               
chr22:9127178-9127592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
7-424
               

               
Cow position:
               
chr22:5616075-5616490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
35, 172
               

               
Conread position:
               
9-228
               

               
Cow position:
               
chr22:25658757-25658533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
142, 204
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr22:18193232-18193660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
51, 246
               

               
Conread position:
               
9-424
               

               
Cow position:
               
chr22:3987290-3987717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 190
               

               
Conread position:
               
11-314
               

               
Cow position:
               
chr22:27835319-27835617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
108, 19
               

               
Conread position:
               
11-323
               

               
Cow position:
               
chr22:20112281-20112594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
160, 174
               

               
Conread position:
               
11-424
               

               
Cow position:
               
chr22:6721287-6720886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
167, 58
               

               
Conread position:
               
11-424
               

               
Cow position:
               
chr22:27550135-27550556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
157, 193
               

               
Conread position:
               
12-193
               

               
Cow position:
               
chr22:3960512-3960319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
12-239
               

               
Cow position:
               
chr22:22054197-22054433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
12-240
               

               
Cow position:
               
chr22:10829129-10828892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
48, 191
               

               
Conread position:
               
12-240
               

               
Cow position:
               
chr22:11500559-11500788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
12-256
               

               
Cow position:
               
chr22:33094342-33094589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
156, 175
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr22:15068206-15068607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 191
               

               
Conread position:
               
12-423
               

               
Cow position:
               
chr22:10161742-10162161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chr22:2095330-2095751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
45, 187
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chr22:6149605-6149193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 150
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chr22:14844351-14844739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
49, 155
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chr22:21567780-21568186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 30
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chr22:27635267-27635675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
162, 40
               

               
Conread position:
               
12-428
               

               
Cow position:
               
chr22:8418249-8418663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 40
               

               
Conread position:
               
13-193
               

               
Cow position:
               
chr22:27581227-27581403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
106, 71
               

               
Conread position:
               
13-198
               

               
Cow position:
               
chr22:3944956-3945145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
13-304
               

               
Cow position:
               
chr22:13849668-13849379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 148
               

               
Conread position:
               
13-309
               

               
Cow position:
               
chr22:9520928-9521223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
189, 106
               

               
Conread position:
               
14-405
               

               
Cow position:
               
chr22:24066451-24066064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
148, 105
               

               
Conread position:
               
14-422
               

               
Cow position:
               
chr22:15153790-15154195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
157, 54
               

               
Conread position:
               
15-358
               

               
Cow position:
               
chr22:37324330-37324671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 94
               

               
Conread position:
               
15-422
               

               
Cow position:
               
chr22:23806762-23806345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
19-222
               

               
Cow position:
               
chr22:10362842-10363065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
19-409
               

               
Cow position:
               
chr22:3533733-3534111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 51
               

               
Conread position:
               
20-227
               

               
Cow position:
               
chr22:4974631-4974427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
149, 46
               

               
Conread position:
               
20-240
               

               
Cow position:
               
chr22:27512374-27512146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
102, 60
               

               
Conread position:
               
20-363
               

               
Cow position:
               
chr22:43743541-43743212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
172, 63
               

               
Conread position:
               
20-424
               

               
Cow position:
               
chr22:38977638-38978037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
250, 39
               

               
Conread position:
               
22-422
               

               
Cow position:
               
chr22:12313210-12313612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 169
               

               
Conread position:
               
23-332
               

               
Cow position:
               
chr22:17125374-17125684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
24-422
               

               
Cow position:
               
chr22:9372308-9372719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
25-240
               

               
Cow position:
               
chr22:1601977-1602199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
37, 178
               

               
Conread position:
               
25-411
               

               
Cow position:
               
chr22:17126248-17126629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
26-250
               

               
Cow position:
               
chr22:15869677-15869900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
145, 159
               

               
Conread position:
               
26-318
               

               
Cow position:
               
chr22:23343353-23343058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
199, 33
               

               
Conread position:
               
26-338
               

               
Cow position:
               
chr22:46568094-46567786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
26-422
               

               
Cow position:
               
chr22:8429677-8430083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
44, 156
               

               
Conread position:
               
26-424
               

               
Cow position:
               
chr22:41853691-41854097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
92, 156
               

               
Conread position:
               
27-294
               

               
Cow position:
               
chr22:36358210-36358482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 159
               

               
Conread position:
               
27-424
               

               
Cow position:
               
chr22:30998693-30999085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 84
               

               
Conread position:
               
28-338
               

               
Cow position:
               
chr22:8398018-8397720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
141, 166
               

               
Conread position:
               
28-386
               

               
Cow position:
               
chr22:15025307-15024952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 35
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr22:23689410-23689010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 176
               

               
Conread position:
               
29-345
               

               
Cow position:
               
chr22:14924931-14924617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
138, 51
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr22:27274895-27274494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
41, 83
               

               
Conread position:
               
30-333
               

               
Cow position:
               
chr22:27047601-27047310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
135, 35
               

               
Conread position:
               
30-411
               

               
Cow position:
               
chr22:14378885-14378510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
34, 86
               

               
Conread position:
               
32-338
               

               
Cow position:
               
chr22:10420832-10421141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
137, 79
               

               
Conread position:
               
33-371
               

               
Cow position:
               
chr22:877313-877654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
33-420
               

               
Cow position:
               
chr22:2523764-2524141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
34-424
               

               
Cow position:
               
chr22:22907996-22908363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
35-231
               

               
Cow position:
               
chr22:10678181-10677990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
35-310
               

               
Cow position:
               
chr22:16053116-16053387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
35-359
               

               
Cow position:
               
chr22:21530547-21530230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
136, 58
               

               
Conread position:
               
35-422
               

               
Cow position:
               
chr22:12800467-12800867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 312
               

               
Conread position:
               
35-424
               

               
Cow position:
               
chr22:12315615-12316003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 163
               

               
Conread position:
               
36-338
               

               
Cow position:
               
chr22:23122221-23121894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
36-419
               

               
Cow position:
               
chr22:1848869-1849265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
36-421
               

               
Cow position:
               
chr22:44410541-44410908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
133, 33
               

               
Conread position:
               
37-424
               

               
Cow position:
               
chr22:11600840-11601230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 153
               

               
Conread position:
               
40-428
               

               
Cow position:
               
chr22:30818020-30818408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
43-415
               

               
Cow position:
               
chr22:10981198-10981571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
7, 69
               

               
Conread position:
               
43-424
               

               
Cow position:
               
chr22:36433158-36432778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
44-186
               

               
Cow position:
               
chr22:3541907-3541765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
125, 39
               

               
Conread position:
               
48-424
               

               
Cow position:
               
chr22:16822921-16823312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
121, 8
               

               
Conread position:
               
52-201
               

               
Cow position:
               
chr22:999941-1000081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
52-414
               

               
Cow position:
               
chr22:12388913-12389287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
52-422
               

               
Cow position:
               
chr22:23980391-23980014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
67, 5
               

               
Conread position:
               
52-424
               

               
Cow position:
               
chr22:16292095-16291738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
119, 8
               

               
Conread position:
               
57-422
               

               
Cow position:
               
chr22:32698586-32698956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 148
               

               
Conread position:
               
57-424
               

               
Cow position:
               
chr22:6097197-6096821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
57-425
               

               
Cow position:
               
chr22:32480653-32480271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 62
               

               
Conread position:
               
58-420
               

               
Cow position:
               
chr22:530749-530387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
60-208
               

               
Cow position:
               
chr22:26969611-26969764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
60-380
               

               
Cow position:
               
chr22:33332647-33332994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
52, 171
               

               
Conread position:
               
62-337
               

               
Cow position:
               
chr22:27740719-27740997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
63-232
               

               
Cow position:
               
chr22:11497025-11497202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 143
               

               
Conread position:
               
64-422
               

               
Cow position:
               
chr22:9668398-9668772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 125
               

               
Conread position:
               
66-365
               

               
Cow position:
               
chr22:9544543-9544252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
203, 101
               

               
Conread position:
               
68-422
               

               
Cow position:
               
chr22:43131714-43131361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 43
               

               
Conread position:
               
69-338
               

               
Cow position:
               
chr22:24628812-24628551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
70-355
               

               
Cow position:
               
chr22:2912743-2912465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
70-422
               

               
Cow position:
               
chr22:33399642-33399296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
72-424
               

               
Cow position:
               
chr22:15618455-15618802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
47, 100
               

               
Conread position:
               
74-227
               

               
Cow position:
               
chr22:10292805-10292964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 139
               

               
Conread position:
               
74-360
               

               
Cow position:
               
chr22:14915191-14914903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 76
               

               
Conread position:
               
76-424
               

               
Cow position:
               
chr22:3566021-3566362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
76-428
               

               
Cow position:
               
chr22:1563405-1563040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
77-423
               

               
Cow position:
               
chr22:40789415-40789750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
80-227
               

               
Cow position:
               
chr22:22553386-22553242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
110, 91
               

               
Conread position:
               
80-419
               

               
Cow position:
               
chr22:45807689-45808019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
91, 31
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr22:4560966-4560614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
134, 80
               

               
Conread position:
               
81-338
               

               
Cow position:
               
chr22:20475425-20475174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
171, 76
               

               
Conread position:
               
83-424
               

               
Cow position:
               
chr22:15668622-15668287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
68, 156
               

               
Conread position:
               
83-424
               

               
Cow position:
               
chr22:36132650-36132993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
186, 103
               

               
Conread position:
               
84-422
               

               
Cow position:
               
chr22:1035965-1035628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
81, 280
               

               
Conread position:
               
84-424
               

               
Cow position:
               
chr22:8090675-8090340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
86-345
               

               
Cow position:
               
chr22:25539846-25540114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
87-424
               

               
Cow position:
               
chr22:16095045-16094711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
88-424
               

               
Cow position:
               
chr22:11767193-11766853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
29, 126
               

               
Conread position:
               
90-406
               

               
Cow position:
               
chr22:21325875-21325559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 106
               

               
Conread position:
               
92-414
               

               
Cow position:
               
chr22:17581564-17581237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 102
               

               
Conread position:
               
94-407
               

               
Cow position:
               
chr22:17193250-17193572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
21, 189
               

               
Conread position:
               
94-424
               

               
Cow position:
               
chr22:27681578-27681919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
76, 104
               

               
Conread position:
               
95-419
               

               
Cow position:
               
chr22:31599314-31599622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
104, 7
               

               
Conread position:
               
99-422
               

               
Cow position:
               
chr22:2123162-2123483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 88
               

               
Conread position:
               
102-424
               

               
Cow position:
               
chr22:12929404-12929083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
67, 83
               

               
Conread position:
               
102-424
               

               
Cow position:
               
chr22:39215743-39215417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
104-420
               

               
Cow position:
               
chr22:19460166-19459853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
107-422
               

               
Cow position:
               
chr22:27275341-27275658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
107-423
               

               
Cow position:
               
chr22:27828259-27828571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 81
               

               
Conread position:
               
108-363
               

               
Cow position:
               
chr22:13221986-13222250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 177
               

               
Conread position:
               
109-411
               

               
Cow position:
               
chr22:10609231-10609539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 201
               

               
Conread position:
               
109-424
               

               
Cow position:
               
chr22:4657169-4656851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
111-420
               

               
Cow position:
               
chr22:5837147-5837451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
58, 186
               

               
Conread position:
               
111-421
               

               
Cow position:
               
chr22:43237528-43237209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
113-424
               

               
Cow position:
               
chr22:22013632-22013944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 41
               

               
Conread position:
               
115-428
               

               
Cow position:
               
chr22:12829728-12829410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
56, 89
               

               
Conread position:
               
117-422
               

               
Cow position:
               
chr22:1105948-1106263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
118-422
               

               
Cow position:
               
chr22:6852697-6852388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
53, 95
               

               
Conread position:
               
119-421
               

               
Cow position:
               
chr22:12892479-12892169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
79, 47
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr22:9597691-9597403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
120-422
               

               
Cow position:
               
chr22:23736123-23735819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
49, 81
               

               
Conread position:
               
124-423
               

               
Cow position:
               
chr22:285467-285173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 64
               

               
Conread position:
               
125-424
               

               
Cow position:
               
chr22:4132464-4132772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
131-422
               

               
Cow position:
               
chr22:37030622-37030331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
135-422
               

               
Cow position:
               
chr22:25254078-25254367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
138-424
               

               
Cow position:
               
chr22:25809364-25809086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
141-422
               

               
Cow position:
               
chr22:17652342-17652625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 209
               

               
Conread position:
               
141-424
               

               
Cow position:
               
chr22:24903498-24903786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
30, 48
               

               
Conread position:
               
143-421
               

               
Cow position:
               
chr22:25690370-25690086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
143-424
               

               
Cow position:
               
chr22:7140553-7140843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
144-425
               

               
Cow position:
               
chr22:18933808-18933515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
146-411
               

               
Cow position:
               
chr22:12749985-12749731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
146-424
               

               
Cow position:
               
chr22:12678506-12678226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
146-424
               

               
Cow position:
               
chr22:16541738-16541454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
146-428
               

               
Cow position:
               
chr22:39602194-39602485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
149-324
               

               
Cow position:
               
chr22:29344795-29344972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
165-424
               

               
Cow position:
               
chr22:23358087-23358347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 28
               

               
Conread position:
               
168-402
               

               
Cow position:
               
chr22:17119755-17119987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
100, 65
               

               
Conread position:
               
168-415
               

               
Cow position:
               
chr22:15737171-15737416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 230
               

               
Conread position:
               
168-421
               

               
Cow position:
               
chr22:8287130-8287372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
168-424
               

               
Cow position:
               
chr22:6289557-6289304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
106, 18
               

               
Conread position:
               
170-417
               

               
Cow position:
               
chr22:9171346-9171589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
170-420
               

               
Cow position:
               
chr22:2109682-2109439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
174-405
               

               
Cow position:
               
chr22:32514234-32514472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
178-424
               

               
Cow position:
               
chr22:2100998-2100754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
181-423
               

               
Cow position:
               
chr22:16235555-16235307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
184-424
               

               
Cow position:
               
chr22:6176333-6176087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
184-424
               

               
Cow position:
               
chr22:7497156-7496912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
186-422
               

               
Cow position:
               
chr22:2632798-2633041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
186-424
               

               
Cow position:
               
chr22:12902892-12902661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
186-424
               

               
Cow position:
               
chr22:33985844-33985612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
187-424
               

               
Cow position:
               
chr22:24134366-24134128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
150, 21
               

               
Conread position:
               
190-420
               

               
Cow position:
               
chr22:4163940-4164170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 6
               

               
Conread position:
               
194-424
               

               
Cow position:
               
chr22:35215511-35215746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
195-411
               

               
Cow position:
               
chr22:3470251-3470471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
25, 64
               

               
Conread position:
               
196-424
               

               
Cow position:
               
chr22:39446258-39446489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
197-424
               

               
Cow position:
               
chr22:42230555-42230326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 56
               

               
Conread position:
               
199-423
               

               
Cow position:
               
chr22:1776027-1776257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
200-421
               

               
Cow position:
               
chr22:4156848-4156624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
200-421
               

               
Cow position:
               
chr22:16806564-16806779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 97
               

               
Conread position:
               
200-422
               

               
Cow position:
               
chr22:17198107-17198331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
201-423
               

               
Cow position:
               
chr22:243083-243296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
201-428
               

               
Cow position:
               
chr22:1588264-1588494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
202-421
               

               
Cow position:
               
chr22:14141371-14141149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
207-422
               

               
Cow position:
               
chr22:26112342-26112560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
130, 116
               

               
Conread position:
               
214-422
               

               
Cow position:
               
chr22:14487918-14488131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
215-420
               

               
Cow position:
               
chr22:16724703-16724497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 177
               

               
Conread position:
               
216-422
               

               
Cow position:
               
chr22:14641872-14641663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
218-422
               

               
Cow position:
               
chr22:14676672-14676881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
218-424
               

               
Cow position:
               
chr22:16813785-16813990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
220-424
               

               
Cow position:
               
chr22:4736012-4736221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
220-424
               

               
Cow position:
               
chr22:30606845-30607054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
220-428
               

               
Cow position:
               
chr22:11189020-11189229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
241-421
               

               
Cow position:
               
chr22:3541108-3540928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
246-424
               

               
Cow position:
               
chr22:26188885-26189067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
252-428
               

               
Cow position:
               
chr22:6202969-6203150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
267-422
               

               
Cow position:
               
chr22:24557489-24557331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
267-424
               

               
Cow position:
               
chr22:10594645-10594805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
268-420
               

               
Cow position:
               
chr22:1551939-1552086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
268-421
               

               
Cow position:
               
chr22:1830086-1830235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
268-422
               

               
Cow position:
               
chr22:2704336-2704492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
268-423
               

               
Cow position:
               
chr22:11790021-11790180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
268-424
               

               
Cow position:
               
chr22:1074302-1074462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
268-424
               

               
Cow position:
               
chr22:2876760-2876603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
268-424
               

               
Cow position:
               
chr22:18403283-18403442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 88
               

               
Conread position:
               
268-424
               

               
Cow position:
               
chr22:35627386-35627545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 51
               

               
Conread position:
               
268-428
               

               
Cow position:
               
chr22:11497532-11497696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 117
               

               
Conread position:
               
268-428
               

               
Cow position:
               
chr22:16639342-16639507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
270-424
               

               
Cow position:
               
chr22:12673295-12673137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
270-425
               

               
Cow position:
               
chr22:30687066-30687215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
273-424
               

               
Cow position:
               
chr22:9075450-9075606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chr22:1046147-1045991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chr22:9735314-9735463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chr22:11049362-11049508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chr22:19305943-19306096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chr22:33522835-33522682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chr22:37702023-37702169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 115
               

               
Conread position:
               
276-424
               

               
Cow position:
               
chr22:7518601-7518749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-425
               

               
Cow position:
               
chr22:2409085-2408933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
278-410
               

               
Cow position:
               
chr22:18441129-18441265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
278-420
               

               
Cow position:
               
chr22:45771976-45771835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
278-421
               

               
Cow position:
               
chr22:7584193-7584051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
280-428
               

               
Cow position:
               
chr22:10966185-10966336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
41, 48
               

               
Conread position:
               
287-424
               

               
Cow position:
               
chr22:29546696-29546832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               
Show alignments to all cow chromosomes.