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Cow genome map

           
Conread name:
           
Emb1-C0005215_L04
        

               
Conread position:
               
1-155
               

               
Cow position:
               
chr23:7484854-7485006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
118, 53
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr23:4421202-4421041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
125, 56
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr23:5151763-5151924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 114
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr23:26741675-26741513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 66
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr23:361135-360952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
167, 54
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr23:39793229-39793415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 33
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr23:35254463-35254264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
50, 83
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr23:7596556-7596354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
119, 23
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr23:36199068-36199267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr23:344403-344196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
68, 114
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr23:39309340-39309143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr23:6158439-6158225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
168, 56
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr23:1670691-1670904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
168, 56
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr23:38854959-38854733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
170, 20
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr23:14191324-14191559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
63, 114
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr23:2055477-2055710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
69, 88
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:32961594-32961351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr23:479302-479546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
51, 201
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr23:18367470-18367727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
118, 207
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr23:25669295-25669010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
231, 79
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr23:2417230-2417540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
173, 59
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr23:15710303-15709982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
84, 28
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr23:14245285-14245598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 171
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr23:3262724-3262403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr23:10868536-10868867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
114, 68
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr23:27544607-27544934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 79
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr23:13555653-13555330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
118, 67
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr23:14164625-14164281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr23:21336714-21336370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 67
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr23:29459314-29458985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
83, 89
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr23:40781101-40781443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 118
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr23:16700264-16699921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 50
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr23:1398263-1397909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 196
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr23:29034088-29034443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
63, 114
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr23:1924061-1923703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 119
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr23:18402511-18402156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 61
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr23:33717769-33717408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 114
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr23:18698250-18697887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 68
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr23:38455410-38455036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 40
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr23:24867077-24867455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr23:39775506-39775874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 11
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr23:8006015-8006417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 190
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr23:21445896-21446286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr23:6244812-6244416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 114
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr23:21452958-21452546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 120
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr23:26632574-26632986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 114
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr23:16246519-16246925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 21
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr23:4972558-4972955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 59
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr23:32105647-32106059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
167, 87
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr23:16583134-16582715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 68
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr23:41472384-41472821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 304
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr23:534004-534423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 110
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr23:2179872-2179466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 50
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr23:10416648-10416231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
147, 68
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr23:4968745-4968333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr23:7845064-7845486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 124
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr23:20195143-20194732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr23:26779885-26779476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
164, 56
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr23:26948965-26949389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 206
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr23:29626189-29626624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 62
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr23:186946-187378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 117
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr23:18802498-18802068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 124
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr23:31601683-31601251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 189
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr23:39302490-39302893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 114
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr23:25864909-25864494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 79
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr23:1337529-1337106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr23:1883168-1883594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 118
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr23:1885401-1884972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 202
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr23:2282399-2281987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr23:4499361-4498931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
52, 59
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr23:5617351-5617776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 189
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr23:8698218-8698626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 114
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr23:13520232-13520645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 28
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr23:15742874-15743292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 50
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr23:26841223-26841623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr23:29242721-29243133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 208
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr23:33601749-33601332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 67
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr23:37065612-37066057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr23:39778188-39778598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 43
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr23:40778037-40778464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 197
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr23:5162207-5162644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 68
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr23:20388864-20388464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr23:29345985-29345570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
58, 122
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chr23:22530642-22530430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
60, 111
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr23:6720501-6720274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
80, 55
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr23:4562659-4562980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
2-387
               

               
Cow position:
               
chr23:5723319-5723701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 197
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr23:9734190-9734618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 195
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr23:22804499-22804920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 195
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr23:41348873-41348429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 365
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr23:4996312-4995895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
132, 19
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr23:37992766-37992968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
111, 72
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr23:9595051-9594827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
143, 22
               

               
Conread position:
               
3-309
               

               
Cow position:
               
chr23:27996910-27997213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
57, 83
               

               
Conread position:
               
3-318
               

               
Cow position:
               
chr23:28053054-28053365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
166, 78
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr23:36309202-36309528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 63
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr23:4529115-4528765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
57, 330
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr23:10554235-10553895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 120
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr23:13599118-13599454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 119
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr23:38208487-38208839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
67, 207
               

               
Conread position:
               
3-380
               

               
Cow position:
               
chr23:11380481-11380095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
59, 220
               

               
Conread position:
               
3-415
               

               
Cow position:
               
chr23:11129011-11129428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 138
               

               
Conread position:
               
3-415
               

               
Cow position:
               
chr23:40502736-40502320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 137
               

               
Conread position:
               
3-420
               

               
Cow position:
               
chr23:16881380-16880973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 33
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr23:3247365-3247788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 54
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr23:8293278-8293709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 103
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr23:10852829-10853248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 54
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr23:20558082-20557641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 199
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr23:24509479-24509885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr23:26986497-26986071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr23:808944-809154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
109, 45
               

               
Conread position:
               
4-226
               

               
Cow position:
               
chr23:3208841-3208618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 116
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr23:25378433-25378726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 30
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr23:6995196-6994862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
167, 74
               

               
Conread position:
               
4-414
               

               
Cow position:
               
chr23:4810528-4810930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 170
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr23:19758845-19758440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
85, 79
               

               
Conread position:
               
4-424
               

               
Cow position:
               
chr23:16690284-16689864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr23:27862110-27862336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
114, 189
               

               
Conread position:
               
6-414
               

               
Cow position:
               
chr23:1536107-1536511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 76
               

               
Conread position:
               
7-338
               

               
Cow position:
               
chr23:40648947-40648618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 114
               

               
Conread position:
               
11-424
               

               
Cow position:
               
chr23:18902266-18901865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 104
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chr23:1068527-1068314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
88, 100
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chr23:39028570-39028782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
157, 54
               

               
Conread position:
               
12-240
               

               
Cow position:
               
chr23:29329883-29330110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 160
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chr23:1290080-1290507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chr23:2502063-2501656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 54
               

               
Conread position:
               
14-197
               

               
Cow position:
               
chr23:23884352-23884175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
154, 48
               

               
Conread position:
               
14-356
               

               
Cow position:
               
chr23:18296595-18296939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 185
               

               
Conread position:
               
14-424
               

               
Cow position:
               
chr23:29801220-29801636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
154, 184
               

               
Conread position:
               
14-424
               

               
Cow position:
               
chr23:40789773-40790166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
156, 55
               

               
Conread position:
               
15-331
               

               
Cow position:
               
chr23:22399190-22399512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
16-338
               

               
Cow position:
               
chr23:23409536-23409846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
155, 46
               

               
Conread position:
               
16-345
               

               
Cow position:
               
chr23:1742147-1742474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 40
               

               
Conread position:
               
17-294
               

               
Cow position:
               
chr23:21493755-21493475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
17-424
               

               
Cow position:
               
chr23:1776840-1776453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 96
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr23:30585870-30585450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 94
               

               
Conread position:
               
18-424
               

               
Cow position:
               
chr23:33711558-33711963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 50
               

               
Conread position:
               
19-359
               

               
Cow position:
               
chr23:1700703-1701025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
42, 96
               

               
Conread position:
               
21-422
               

               
Cow position:
               
chr23:24930278-24929870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 120
               

               
Conread position:
               
21-428
               

               
Cow position:
               
chr23:3191329-3190922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
102, 43
               

               
Conread position:
               
22-211
               

               
Cow position:
               
chr23:5191328-5191508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
162, 35
               

               
Conread position:
               
24-421
               

               
Cow position:
               
chr23:20248902-20248496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 188
               

               
Conread position:
               
24-422
               

               
Cow position:
               
chr23:29786555-29786144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
26-155
               

               
Cow position:
               
chr23:20259377-20259244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
26-155
               

               
Cow position:
               
chr23:20437763-20437630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
26-327
               

               
Cow position:
               
chr23:2021665-2021359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 160
               

               
Conread position:
               
26-359
               

               
Cow position:
               
chr23:36017942-36018285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
36, 146
               

               
Conread position:
               
26-424
               

               
Cow position:
               
chr23:5191298-5190908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
142, 161
               

               
Conread position:
               
26-424
               

               
Cow position:
               
chr23:40443665-40444057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
31, 116
               

               
Conread position:
               
27-408
               

               
Cow position:
               
chr23:1189101-1188735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
49, 125
               

               
Conread position:
               
28-294
               

               
Cow position:
               
chr23:29447239-29446976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
141, 41
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr23:5451123-5451523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
39, 87
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr23:33569938-33570332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
30, 71
               

               
Conread position:
               
30-413
               

               
Cow position:
               
chr23:1585585-1585209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
40, 85
               

               
Conread position:
               
30-422
               

               
Cow position:
               
chr23:16847766-16848171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
32-227
               

               
Cow position:
               
chr23:10014341-10014542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
32-421
               

               
Cow position:
               
chr23:29021483-29021866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
84, 125
               

               
Conread position:
               
33-314
               

               
Cow position:
               
chr23:19371264-19370985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
33-419
               

               
Cow position:
               
chr23:22496760-22496361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 106
               

               
Conread position:
               
33-422
               

               
Cow position:
               
chr23:25675886-25675498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 36
               

               
Conread position:
               
33-424
               

               
Cow position:
               
chr23:38973653-38974036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
34-338
               

               
Cow position:
               
chr23:38503309-38502994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
36-424
               

               
Cow position:
               
chr23:4726597-4726993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
36-424
               

               
Cow position:
               
chr23:34356443-34356842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 169
               

               
Conread position:
               
38-337
               

               
Cow position:
               
chr23:2488173-2487879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr23:39813321-39813701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 28
               

               
Conread position:
               
39-345
               

               
Cow position:
               
chr23:4104219-4104516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
135, 8
               

               
Conread position:
               
44-422
               

               
Cow position:
               
chr23:1759089-1759446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
198, 36
               

               
Conread position:
               
45-224
               

               
Cow position:
               
chr23:18107521-18107345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
76, 17
               

               
Conread position:
               
46-424
               

               
Cow position:
               
chr23:3282295-3281909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
228, 63
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr23:40817400-40817059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
121, 152
               

               
Conread position:
               
49-422
               

               
Cow position:
               
chr23:8837864-8837491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
67, 8
               

               
Conread position:
               
51-415
               

               
Cow position:
               
chr23:32480211-32479825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
56-383
               

               
Cow position:
               
chr23:40844483-40844802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
112, 79
               

               
Conread position:
               
56-423
               

               
Cow position:
               
chr23:39049595-39049240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
58-240
               

               
Cow position:
               
chr23:25725749-25725924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
58-411
               

               
Cow position:
               
chr23:18416216-18415869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
61, 130
               

               
Conread position:
               
58-424
               

               
Cow position:
               
chr23:1583363-1583718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
102, 53
               

               
Conread position:
               
59-331
               

               
Cow position:
               
chr23:35942049-35942317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
110, 7
               

               
Conread position:
               
59-424
               

               
Cow position:
               
chr23:16744380-16744744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
61-424
               

               
Cow position:
               
chr23:12091524-12091159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
110, 128
               

               
Conread position:
               
63-338
               

               
Cow position:
               
chr23:19774611-19774882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
108, 56
               

               
Conread position:
               
66-338
               

               
Cow position:
               
chr23:26050876-26051152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
66-366
               

               
Cow position:
               
chr23:29069604-29069298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
66-372
               

               
Cow position:
               
chr23:33622312-33621998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 122
               

               
Conread position:
               
69-226
               

               
Cow position:
               
chr23:23113872-23114033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
50, 137
               

               
Conread position:
               
69-359
               

               
Cow position:
               
chr23:13945872-13946172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
54, 138
               

               
Conread position:
               
69-424
               

               
Cow position:
               
chr23:35239189-35239552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
45, 31
               

               
Conread position:
               
71-292
               

               
Cow position:
               
chr23:4329836-4329607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
71-345
               

               
Cow position:
               
chr23:4966665-4966939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 64
               

               
Conread position:
               
72-338
               

               
Cow position:
               
chr23:4327850-4327587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
72-359
               

               
Cow position:
               
chr23:39083299-39083585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
178, 90
               

               
Conread position:
               
73-406
               

               
Cow position:
               
chr23:349880-349538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
43, 224
               

               
Conread position:
               
74-359
               

               
Cow position:
               
chr23:21502789-21502496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
75-422
               

               
Cow position:
               
chr23:37886-38229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
122, 74
               

               
Conread position:
               
75-424
               

               
Cow position:
               
chr23:799818-799465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
167, 63
               

               
Conread position:
               
76-414
               

               
Cow position:
               
chr23:5436794-5436449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
80-330
               

               
Cow position:
               
chr23:24984316-24984064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
37, 66
               

               
Conread position:
               
81-356
               

               
Cow position:
               
chr23:4335935-4336198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
83-422
               

               
Cow position:
               
chr23:1655747-1656093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
83-424
               

               
Cow position:
               
chr23:12363761-12363418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 28
               

               
Conread position:
               
83-424
               

               
Cow position:
               
chr23:18286056-18286384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
84-422
               

               
Cow position:
               
chr23:10829724-10829380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
86-420
               

               
Cow position:
               
chr23:36244207-36244542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
87-422
               

               
Cow position:
               
chr23:3245061-3244716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 211
               

               
Conread position:
               
88-424
               

               
Cow position:
               
chr23:22414431-22414108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
89-427
               

               
Cow position:
               
chr23:5600415-5600758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
65, 108
               

               
Conread position:
               
90-415
               

               
Cow position:
               
chr23:5437134-5436809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
81, 97
               

               
Conread position:
               
93-408
               

               
Cow position:
               
chr23:468593-468279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
23, 80
               

               
Conread position:
               
93-424
               

               
Cow position:
               
chr23:5732417-5732738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 25
               

               
Conread position:
               
95-363
               

               
Cow position:
               
chr23:33554406-33554147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
96-362
               

               
Cow position:
               
chr23:28945194-28944933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
96-422
               

               
Cow position:
               
chr23:11081128-11081457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
98-424
               

               
Cow position:
               
chr23:3890694-3890371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
21, 74
               

               
Conread position:
               
99-232
               

               
Cow position:
               
chr23:9713189-9713329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
99-424
               

               
Cow position:
               
chr23:9226147-9226474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
70, 144
               

               
Conread position:
               
100-423
               

               
Cow position:
               
chr23:5795352-5795676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 11
               

               
Conread position:
               
104-424
               

               
Cow position:
               
chr23:9805873-9805562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
58, 90
               

               
Conread position:
               
106-422
               

               
Cow position:
               
chr23:35149632-35149951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
107-391
               

               
Cow position:
               
chr23:16797929-16797635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
107-424
               

               
Cow position:
               
chr23:24966577-24966260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
109-369
               

               
Cow position:
               
chr23:1701053-1701320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 102
               

               
Conread position:
               
109-422
               

               
Cow position:
               
chr23:307340-307657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
110-423
               

               
Cow position:
               
chr23:39573373-39573065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 131
               

               
Conread position:
               
111-387
               

               
Cow position:
               
chr23:306409-306689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
113-428
               

               
Cow position:
               
chr23:40348755-40348440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
114-359
               

               
Cow position:
               
chr23:39780644-39780889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
116-424
               

               
Cow position:
               
chr23:24685141-24685441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
158, 55
               

               
Conread position:
               
118-421
               

               
Cow position:
               
chr23:283496-283204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
118-422
               

               
Cow position:
               
chr23:40330263-40329953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
50, 85
               

               
Conread position:
               
123-411
               

               
Cow position:
               
chr23:15280602-15280307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 72
               

               
Conread position:
               
124-387
               

               
Cow position:
               
chr23:18036760-18036491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 65
               

               
Conread position:
               
124-423
               

               
Cow position:
               
chr23:10497606-10497896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
36, 63
               

               
Conread position:
               
140-407
               

               
Cow position:
               
chr23:17486913-17486643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 184
               

               
Conread position:
               
140-424
               

               
Cow position:
               
chr23:35929871-35930149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
141-417
               

               
Cow position:
               
chr23:14651790-14651513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
141-424
               

               
Cow position:
               
chr23:385398-385107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 153
               

               
Conread position:
               
141-424
               

               
Cow position:
               
chr23:3293606-3293890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 194
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr23:1103158-1103449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
142-422
               

               
Cow position:
               
chr23:38264618-38264330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
148-428
               

               
Cow position:
               
chr23:5881597-5881316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
153-411
               

               
Cow position:
               
chr23:39811434-39811170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
160-424
               

               
Cow position:
               
chr23:18822925-18823185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
166-424
               

               
Cow position:
               
chr23:7709734-7709983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
166-424
               

               
Cow position:
               
chr23:11224799-11225055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
168-424
               

               
Cow position:
               
chr23:32166964-32167232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
169-422
               

               
Cow position:
               
chr23:18384667-18384918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 31
               

               
Conread position:
               
172-356
               

               
Cow position:
               
chr23:21309464-21309281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
173-422
               

               
Cow position:
               
chr23:2470945-2471204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
179-424
               

               
Cow position:
               
chr23:4003595-4003850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
180-417
               

               
Cow position:
               
chr23:20093287-20093050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
185-422
               

               
Cow position:
               
chr23:40095148-40095381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
185-424
               

               
Cow position:
               
chr23:25990479-25990237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 163
               

               
Conread position:
               
190-424
               

               
Cow position:
               
chr23:13254160-13254399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 12
               

               
Conread position:
               
200-424
               

               
Cow position:
               
chr23:13137961-13137738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 144
               

               
Conread position:
               
204-424
               

               
Cow position:
               
chr23:39267763-39267986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
209-423
               

               
Cow position:
               
chr23:1877912-1877697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr23:17597411-17597623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 138
               

               
Conread position:
               
213-422
               

               
Cow position:
               
chr23:1194504-1194296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 146
               

               
Conread position:
               
218-420
               

               
Cow position:
               
chr23:32621276-32621485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
221-425
               

               
Cow position:
               
chr23:27848992-27849195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 171
               

               
Conread position:
               
246-415
               

               
Cow position:
               
chr23:21423788-21423958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
247-424
               

               
Cow position:
               
chr23:33232680-33232499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
268-422
               

               
Cow position:
               
chr23:4416244-4416086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
268-422
               

               
Cow position:
               
chr23:4521841-4521682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
268-424
               

               
Cow position:
               
chr23:13410712-13410560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr23:35656452-35656610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
273-420
               

               
Cow position:
               
chr23:21664353-21664498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
275-414
               

               
Cow position:
               
chr23:9726491-9726348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
275-415
               

               
Cow position:
               
chr23:4343532-4343676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
275-422
               

               
Cow position:
               
chr23:3270349-3270498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
62, 118
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chr23:18740167-18740014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chr23:23104437-23104289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chr23:24718751-24718602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
276-415
               

               
Cow position:
               
chr23:26975413-26975275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
276-424
               

               
Cow position:
               
chr23:809557-809708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
276-424
               

               
Cow position:
               
chr23:4291406-4291558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               
Show alignments to all cow chromosomes.