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Cow genome map

           
Conread name:
           
Emb1-C0005215_L04
        

               
Conread position:
               
1-152
               

               
Cow position:
               
chrX:42855208-42855365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chrX:16324164-16324013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
118, 79
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chrX:6639925-6640082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chrX:877224-877044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chrX:19019311-19019111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
94, 81
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chrX:2206744-2206558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
187, 79
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chrX:7718654-7718853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chrX:41403772-41403979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 200
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chrX:41410320-41410527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 200
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chrX:46315581-46315375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 112
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chrX:42339136-42338943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chrX:35609786-35609993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 204
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chrX:10437865-10437663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
71, 142
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chrX:23061253-23061444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chrX:35284423-35284631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
168, 67
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chrX:14924800-14925024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 20
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chrX:42994414-42994636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chrX:23497865-23497642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 87
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chrX:41167165-41166937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chrX:42461946-42461719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
83, 112
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chrX:9855100-9855324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
61, 165
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chrX:9953941-9954165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
61, 165
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chrX:40567399-40567624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 154
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chrX:41198904-41199132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
113, 73
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chrX:19015242-19015467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
198, 54
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chrX:41743712-41743944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 74
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chrX:9997534-9997303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
153, 59
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chrX:12018075-12018323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chrX:26285779-26286012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 135
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chrX:28845645-28845864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
168, 45
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chrX:16416308-16416542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chrX:40647777-40648019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
95, 119
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chrX:36250062-36249825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
179, 161
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chrX:10123545-10123315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
119, 154
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chrX:11581734-11581971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 95
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chrX:34754392-34754152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
67, 194
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chrX:25237976-25238227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 131
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chrX:17497896-17498132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
170, 67
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chrX:37843520-37843810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
114, 163
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chrX:754758-755060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
67, 192
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chrX:26440980-26440689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
83, 199
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chrX:44873752-44873459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chrX:15814897-15815192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 52
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chrX:2467679-2467995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 176
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chrX:7571706-7572018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
167, 68
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chrX:40692938-40692637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
170, 37
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chrX:44835016-44834679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chrX:46722941-46722617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 189
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chrX:48195241-48194918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chrX:48652928-48652604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
13, 194
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chrX:27498568-27498890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chrX:11082814-11082503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
204, 110
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chrX:11856229-11856549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 13
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chrX:47967399-47967727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
115, 85
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chrX:32171082-32170764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
114, 49
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chrX:19690017-19690345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
61, 164
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chrX:1514601-1514288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
168, 68
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chrX:6265786-6265468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
167, 68
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chrX:37232209-37232539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 114
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chrX:39558547-39558217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 85
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chrX:47481599-47481928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
80, 195
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chrX:40481072-40480734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chrX:37910252-37910581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 61
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chrX:1503138-1503465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
168, 118
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chrX:11073389-11073053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chrX:17662797-17662460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 114
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chrX:45113428-45113759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
118, 67
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chrX:4044051-4043722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chrX:7695559-7695893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
161, 58
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chrX:6690448-6690102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 67
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chrX:17888606-17888267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 39
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chrX:23514218-23513866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chrX:28134145-28134494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 112
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chrX:27394214-27393867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 79
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chrX:40269276-40269653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
30, 122
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chrX:8797047-8797412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 249
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chrX:9416893-9416521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 110
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chrX:6278706-6278330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chrX:11717983-11717619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 60
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chrX:4515467-4515880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
51, 226
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chrX:21672351-21672761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 198
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chrX:35542691-35543094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 114
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chrX:13868493-13868915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 211
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chrX:36975749-36976163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 236
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chrX:38071971-38071567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
61, 159
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chrX:8730879-8731306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 241
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chrX:10831697-10831267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 122
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chrX:34502718-34503133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 114
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chrX:35273151-35273587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chrX:37119399-37119791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
78, 46
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chrX:47344094-47344515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chrX:20340091-20339678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 54
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chrX:28013640-28013223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
153, 73
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chrX:34543587-34544003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chrX:41673903-41674314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 202
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chrX:15545694-15546104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chrX:23563997-23563567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 193
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chrX:1176183-1175766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 121
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chrX:1499469-1499878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 63
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chrX:7277719-7278130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chrX:14973935-14973533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chrX:15007351-15006935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 203
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chrX:17794785-17795203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 95
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chrX:22074600-22075019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 110
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chrX:22482889-22482465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chrX:32329960-32330395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chrX:38642057-38642466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 114
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chrX:45598804-45598384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
61, 110
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chrX:47211048-47210612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:12290535-12290943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 68
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:16541878-16541431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:17231534-17231962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 68
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:21593083-21593516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 198
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:25816096-25815674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 65
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:27174795-27175225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 239
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:30963072-30962650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 66
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:31729255-31729662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 56
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:31949131-31948709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 68
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:32020322-32019908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 168
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:34441651-34441228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 20
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:35268690-35269081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
374, 23
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:40183550-40183129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 176
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:40826947-40826525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:42247384-42246956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 82
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:46587617-46588045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 376
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:48010394-48010830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 244
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:151701-152132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:4633051-4632627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 61
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:7721784-7722201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 115
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:9201346-9201770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 114
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:9252378-9251936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 49
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:9425942-9425535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 112
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:10866068-10865643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:11655888-11656305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 112
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:12980031-12979608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:16762572-16762995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 51
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:27432119-27431697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 115
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:28847079-28846666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
268, 79
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:30338124-30337727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
173, 56
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:31443022-31442612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 146
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:33466413-33466849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 61
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:34411640-34412075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 106
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:36283145-36283567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 165
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:38094726-38094299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:38549248-38549674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:38963906-38964324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 82
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:40035645-40035215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 90
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:41122871-41123272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 56
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:41238566-41238135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 82
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:42381300-42380885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 83
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:42492715-42492294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 166
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:45430217-45429804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
90, 111
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chrX:46073021-46072603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chrX:20887845-20887418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 41
               

               
Conread position:
               
2-193
               

               
Cow position:
               
chrX:35042020-35042219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chrX:4091448-4091645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
117, 74
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chrX:45015387-45015603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
161, 62
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chrX:30833045-30832826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
167, 81
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chrX:28105721-28105945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 110
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chrX:29509643-29509399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 216
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chrX:45089244-45089563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chrX:45148975-45149285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
54, 168
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chrX:45404033-45403708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chrX:47303079-47302760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
58, 140
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chrX:37574657-37574959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
272, 86
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chrX:42011080-42011419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 113
               

               
Conread position:
               
2-359
               

               
Cow position:
               
chrX:878571-878223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 24
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chrX:27772159-27771807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 27
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chrX:13647983-13647579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 55
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chrX:41879134-41878719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 112
               

               
Conread position:
               
2-419
               

               
Cow position:
               
chrX:15147386-15146977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 32
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chrX:11844442-11844011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 40
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chrX:27705390-27705812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 55
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chrX:7351100-7351528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chrX:47248984-47248570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 99
               

               
Conread position:
               
3-166
               

               
Cow position:
               
chrX:4123637-4123802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chrX:38967452-38967615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chrX:40452411-40452225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
57, 112
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chrX:6234647-6234424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 59
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chrX:10095828-10096062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 126
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chrX:18999690-18999919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
168, 193
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chrX:12115841-12116097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
108, 203
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chrX:42874779-42875039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 198
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chrX:12405575-12405291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
112, 39
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chrX:37416273-37415982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
67, 236
               

               
Conread position:
               
3-317
               

               
Cow position:
               
chrX:47301102-47300786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
62, 137
               

               
Conread position:
               
3-318
               

               
Cow position:
               
chrX:23583360-23583679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
59, 139
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chrX:27516334-27516644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
166, 75
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chrX:36778209-36778532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
71, 173
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chrX:3130383-3130710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
3-340
               

               
Cow position:
               
chrX:41884616-41884271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 112
               

               
Conread position:
               
3-350
               

               
Cow position:
               
chrX:5900259-5900612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
124, 73
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chrX:34401799-34402164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 109
               

               
Conread position:
               
3-359
               

               
Cow position:
               
chrX:38006966-38006611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 112
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chrX:20697806-20697448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 185
               

               
Conread position:
               
3-363
               

               
Cow position:
               
chrX:5872115-5872480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 215
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chrX:33639773-33640141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 137
               

               
Conread position:
               
3-368
               

               
Cow position:
               
chrX:14599331-14599704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 112
               

               
Conread position:
               
3-387
               

               
Cow position:
               
chrX:34663042-34662656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
113, 54
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chrX:37836389-37836769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
81, 193
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chrX:22821849-22822264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 118
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chrX:31294742-31294360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
168, 16
               

               
Conread position:
               
3-409
               

               
Cow position:
               
chrX:12309588-12309173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 100
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chrX:8899826-8900232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
59, 195
               

               
Conread position:
               
3-414
               

               
Cow position:
               
chrX:6488388-6488782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
155, 59
               

               
Conread position:
               
3-414
               

               
Cow position:
               
chrX:30921987-30922389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
3-415
               

               
Cow position:
               
chrX:34554530-34554942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 63
               

               
Conread position:
               
3-420
               

               
Cow position:
               
chrX:30133522-30133101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 26
               

               
Conread position:
               
3-421
               

               
Cow position:
               
chrX:44396816-44397235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
3-421
               

               
Cow position:
               
chrX:46532708-46532266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chrX:29545078-29544662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 57
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chrX:34565094-34565510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
168, 54
               

               
Conread position:
               
3-423
               

               
Cow position:
               
chrX:27509218-27508798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 118
               

               
Conread position:
               
3-423
               

               
Cow position:
               
chrX:31489314-31489747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 9
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chrX:3579746-3580172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 184
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chrX:7178710-7179110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
174, 23
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chrX:13912882-13913302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 73
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chrX:14884160-14883730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 112
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chrX:25035587-25035154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 194
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chrX:31250191-31250617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chrX:32420020-32420437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 109
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chrX:38218508-38218940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 113
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chrX:44054603-44055030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 188
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chrX:44961548-44961982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
3-425
               

               
Cow position:
               
chrX:8925507-8925908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 65
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chrX:36197769-36198206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 197
               

               
Conread position:
               
4-227
               

               
Cow position:
               
chrX:29876264-29876047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
167, 64
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chrX:34270209-34270433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
163, 57
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chrX:36961438-36961680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 216
               

               
Conread position:
               
4-326
               

               
Cow position:
               
chrX:40809489-40809819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chrX:33493577-33493943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 111
               

               
Conread position:
               
4-421
               

               
Cow position:
               
chrX:33000706-33001122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
4-423
               

               
Cow position:
               
chrX:47873538-47873110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
4-424
               

               
Cow position:
               
chrX:10252379-10251975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
7-202
               

               
Cow position:
               
chrX:11589783-11589583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
45, 52
               

               
Conread position:
               
7-420
               

               
Cow position:
               
chrX:9651240-9650805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
50, 125
               

               
Conread position:
               
7-420
               

               
Cow position:
               
chrX:29602027-29601606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 80
               

               
Conread position:
               
7-422
               

               
Cow position:
               
chrX:41526718-41526309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
7-424
               

               
Cow position:
               
chrX:4269261-4268843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 169
               

               
Conread position:
               
7-425
               

               
Cow position:
               
chrX:11939121-11938725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
245, 114
               

               
Conread position:
               
9-425
               

               
Cow position:
               
chrX:47588510-47588941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 197
               

               
Conread position:
               
12-210
               

               
Cow position:
               
chrX:1505523-1505720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
12-216
               

               
Cow position:
               
chrX:8991698-8991900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
139, 71
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chrX:40116232-40116443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
182, 107
               

               
Conread position:
               
12-232
               

               
Cow position:
               
chrX:45874809-45875029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
157, 174
               

               
Conread position:
               
12-338
               

               
Cow position:
               
chrX:3489074-3488753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
155, 56
               

               
Conread position:
               
12-359
               

               
Cow position:
               
chrX:23785464-23785805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
50, 168
               

               
Conread position:
               
12-359
               

               
Cow position:
               
chrX:43730404-43730065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 71
               

               
Conread position:
               
12-386
               

               
Cow position:
               
chrX:45373481-45373094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
12-418
               

               
Cow position:
               
chrX:31436293-31436690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 56
               

               
Conread position:
               
12-422
               

               
Cow position:
               
chrX:11633489-11633907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 188
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chrX:24366023-24365595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 297
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chrX:45110466-45110878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
45, 91
               

               
Conread position:
               
12-425
               

               
Cow position:
               
chrX:26492813-26493235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 190
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chrX:8869598-8869174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
13-249
               

               
Cow position:
               
chrX:10306482-10306723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
84, 197
               

               
Conread position:
               
13-380
               

               
Cow position:
               
chrX:42235722-42235336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 111
               

               
Conread position:
               
13-424
               

               
Cow position:
               
chrX:13177653-13177257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 98
               

               
Conread position:
               
14-302
               

               
Cow position:
               
chrX:45993031-45993332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
50, 89
               

               
Conread position:
               
14-402
               

               
Cow position:
               
chrX:47484459-47484057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 195
               

               
Conread position:
               
15-410
               

               
Cow position:
               
chrX:28878345-28877953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 44
               

               
Conread position:
               
16-424
               

               
Cow position:
               
chrX:161236-161627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
19-424
               

               
Cow position:
               
chrX:32820847-32821267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
23-372
               

               
Cow position:
               
chrX:24288111-24287758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
39, 97
               

               
Conread position:
               
23-422
               

               
Cow position:
               
chrX:9770863-9770461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 169
               

               
Conread position:
               
23-422
               

               
Cow position:
               
chrX:36060973-36061384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
34, 219
               

               
Conread position:
               
23-424
               

               
Cow position:
               
chrX:34376777-34377166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
148, 46
               

               
Conread position:
               
24-378
               

               
Cow position:
               
chrX:29680438-29680084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 88
               

               
Conread position:
               
25-405
               

               
Cow position:
               
chrX:47166061-47165676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
26-152
               

               
Cow position:
               
chrX:11949668-11949542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
26-210
               

               
Cow position:
               
chrX:29563546-29563367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
26-294
               

               
Cow position:
               
chrX:23299779-23300052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 195
               

               
Conread position:
               
26-314
               

               
Cow position:
               
chrX:22821239-22821532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
17, 177
               

               
Conread position:
               
26-318
               

               
Cow position:
               
chrX:23341143-23340852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 158
               

               
Conread position:
               
26-318
               

               
Cow position:
               
chrX:35258907-35258613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 135
               

               
Conread position:
               
26-323
               

               
Cow position:
               
chrX:19841834-19841536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 123
               

               
Conread position:
               
26-366
               

               
Cow position:
               
chrX:169701-169380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
248, 54
               

               
Conread position:
               
26-404
               

               
Cow position:
               
chrX:23122210-23122603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
26-411
               

               
Cow position:
               
chrX:4279290-4278905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
34, 114
               

               
Conread position:
               
26-421
               

               
Cow position:
               
chrX:27145447-27145823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 86
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chrX:35885903-35885507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 154
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chrX:22387421-22387016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
28, 176
               

               
Conread position:
               
29-228
               

               
Cow position:
               
chrX:37750426-37750227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
29-338
               

               
Cow position:
               
chrX:46433310-46433629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
31, 177
               

               
Conread position:
               
29-425
               

               
Cow position:
               
chrX:6407376-6407771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 52
               

               
Conread position:
               
30-424
               

               
Cow position:
               
chrX:4398954-4399345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 85
               

               
Conread position:
               
30-424
               

               
Cow position:
               
chrX:34792482-34792096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
30-424
               

               
Cow position:
               
chrX:37955666-37956072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
139, 38
               

               
Conread position:
               
32-421
               

               
Cow position:
               
chrX:44192622-44192218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
33-153
               

               
Cow position:
               
chrX:41271376-41271256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
33-421
               

               
Cow position:
               
chrX:14955936-14955543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
33-424
               

               
Cow position:
               
chrX:15231826-15231432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 50
               

               
Conread position:
               
34-310
               

               
Cow position:
               
chrX:10128837-10129118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 161
               

               
Conread position:
               
36-232
               

               
Cow position:
               
chrX:41992207-41992015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
36-237
               

               
Cow position:
               
chrX:30263087-30263288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
132, 159
               

               
Conread position:
               
37-424
               

               
Cow position:
               
chrX:20677207-20677591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
38-405
               

               
Cow position:
               
chrX:41068564-41068928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 21
               

               
Conread position:
               
38-424
               

               
Cow position:
               
chrX:20584160-20584539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
39-326
               

               
Cow position:
               
chrX:22454252-22453972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
43-424
               

               
Cow position:
               
chrX:36355957-36356331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
44-411
               

               
Cow position:
               
chrX:27227966-27228343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 158
               

               
Conread position:
               
45-422
               

               
Cow position:
               
chrX:46547033-46546648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
47-225
               

               
Cow position:
               
chrX:36314449-36314271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
56, 125
               

               
Conread position:
               
48-307
               

               
Cow position:
               
chrX:48571146-48570881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
52-421
               

               
Cow position:
               
chrX:21986441-21986077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
119, 66
               

               
Conread position:
               
52-424
               

               
Cow position:
               
chrX:25207991-25207634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 5
               

               
Conread position:
               
53-338
               

               
Cow position:
               
chrX:9365822-9365538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
115, 21
               

               
Conread position:
               
55-428
               

               
Cow position:
               
chrX:34222562-34222940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
56-423
               

               
Cow position:
               
chrX:29723596-29723977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 128
               

               
Conread position:
               
57-240
               

               
Cow position:
               
chrX:32215053-32215237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 141
               

               
Conread position:
               
57-354
               

               
Cow position:
               
chrX:42873249-42873539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
53, 5
               

               
Conread position:
               
57-359
               

               
Cow position:
               
chrX:11085201-11084904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
114, 126
               

               
Conread position:
               
57-423
               

               
Cow position:
               
chrX:5118646-5118272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 54
               

               
Conread position:
               
57-423
               

               
Cow position:
               
chrX:8917252-8917621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
111, 129
               

               
Conread position:
               
57-424
               

               
Cow position:
               
chrX:34313889-34314248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 39
               

               
Conread position:
               
57-424
               

               
Cow position:
               
chrX:35822198-35822558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
101, 129
               

               
Conread position:
               
57-424
               

               
Cow position:
               
chrX:47280076-47279709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
57-428
               

               
Cow position:
               
chrX:20168414-20168786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
58-424
               

               
Cow position:
               
chrX:11614556-11614902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
105, 140
               

               
Conread position:
               
60-319
               

               
Cow position:
               
chrX:21566261-21566526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
61-300
               

               
Cow position:
               
chrX:27685107-27685349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 143
               

               
Conread position:
               
62-386
               

               
Cow position:
               
chrX:616401-616071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
109, 49
               

               
Conread position:
               
62-424
               

               
Cow position:
               
chrX:18204602-18204239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
59, 134
               

               
Conread position:
               
65-238
               

               
Cow position:
               
chrX:27269834-27270004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
65-356
               

               
Cow position:
               
chrX:7710679-7710382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 137
               

               
Conread position:
               
65-425
               

               
Cow position:
               
chrX:36393483-36393113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
51, 144
               

               
Conread position:
               
66-420
               

               
Cow position:
               
chrX:41027022-41027383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
66-422
               

               
Cow position:
               
chrX:870305-869957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 71
               

               
Conread position:
               
68-415
               

               
Cow position:
               
chrX:40685464-40685111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
103, 53
               

               
Conread position:
               
69-422
               

               
Cow position:
               
chrX:48262474-48262830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 119
               

               
Conread position:
               
69-423
               

               
Cow position:
               
chrX:41870939-41871283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
70-414
               

               
Cow position:
               
chrX:34505178-34504836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
119, 41
               

               
Conread position:
               
71-415
               

               
Cow position:
               
chrX:45875261-45875608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
50, 144
               

               
Conread position:
               
71-424
               

               
Cow position:
               
chrX:43115021-43115376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
72-346
               

               
Cow position:
               
chrX:38728608-38728880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
99, 140
               

               
Conread position:
               
72-424
               

               
Cow position:
               
chrX:34315397-34315754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
73-317
               

               
Cow position:
               
chrX:45005502-45005741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
183, 54
               

               
Conread position:
               
73-421
               

               
Cow position:
               
chrX:41846615-41846270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
53, 93
               

               
Conread position:
               
75-231
               

               
Cow position:
               
chrX:19003174-19003327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
76-422
               

               
Cow position:
               
chrX:33654972-33654618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
36, 102
               

               
Conread position:
               
77-402
               

               
Cow position:
               
chrX:27946183-27945848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
39, 161
               

               
Conread position:
               
81-424
               

               
Cow position:
               
chrX:4403194-4403545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
105, 124
               

               
Conread position:
               
83-345
               

               
Cow position:
               
chrX:5679684-5679427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
233, 118
               

               
Conread position:
               
84-370
               

               
Cow position:
               
chrX:27119582-27119862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 69
               

               
Conread position:
               
84-415
               

               
Cow position:
               
chrX:4296945-4296606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 111
               

               
Conread position:
               
84-421
               

               
Cow position:
               
chrX:26881685-26881338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
87, 27
               

               
Conread position:
               
85-410
               

               
Cow position:
               
chrX:46291023-46291354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
114, 14
               

               
Conread position:
               
85-424
               

               
Cow position:
               
chrX:24331662-24332004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
86, 110
               

               
Conread position:
               
87-421
               

               
Cow position:
               
chrX:42927933-42927606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
87-423
               

               
Cow position:
               
chrX:10829317-10829661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
14, 111
               

               
Conread position:
               
88-198
               

               
Cow position:
               
chrX:32747570-32747683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
90-424
               

               
Cow position:
               
chrX:17949601-17949265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
94-425
               

               
Cow position:
               
chrX:13923764-13924089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 97
               

               
Conread position:
               
95-321
               

               
Cow position:
               
chrX:12203494-12203274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
97-334
               

               
Cow position:
               
chrX:31515065-31515308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
98-424
               

               
Cow position:
               
chrX:22283730-22284066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
100-424
               

               
Cow position:
               
chrX:21327802-21328141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
102-422
               

               
Cow position:
               
chrX:10516157-10516479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
106, 9
               

               
Conread position:
               
103-387
               

               
Cow position:
               
chrX:40283027-40283313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 91
               

               
Conread position:
               
105-359
               

               
Cow position:
               
chrX:37129172-37129430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
53, 36
               

               
Conread position:
               
105-424
               

               
Cow position:
               
chrX:12095870-12095544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 81
               

               
Conread position:
               
105-428
               

               
Cow position:
               
chrX:34837150-34836842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
66, 6
               

               
Conread position:
               
107-424
               

               
Cow position:
               
chrX:27261093-27261417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
36, 40
               

               
Conread position:
               
110-419
               

               
Cow position:
               
chrX:1466069-1466385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
49, 93
               

               
Conread position:
               
111-423
               

               
Cow position:
               
chrX:29050156-29050468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
112-424
               

               
Cow position:
               
chrX:42855365-42855690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
113-358
               

               
Cow position:
               
chrX:45884064-45883813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
113-378
               

               
Cow position:
               
chrX:33205053-33204787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
113-422
               

               
Cow position:
               
chrX:48071072-48071387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
114-422
               

               
Cow position:
               
chrX:10859386-10859088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
139, 69
               

               
Conread position:
               
114-424
               

               
Cow position:
               
chrX:40680523-40680842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
114-428
               

               
Cow position:
               
chrX:20882025-20881730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
116-424
               

               
Cow position:
               
chrX:4153122-4152817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
5, 74
               

               
Conread position:
               
118-422
               

               
Cow position:
               
chrX:35590841-35590533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 69
               

               
Conread position:
               
119-378
               

               
Cow position:
               
chrX:16575040-16575294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 81
               

               
Conread position:
               
121-415
               

               
Cow position:
               
chrX:47358226-47358532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
121-422
               

               
Cow position:
               
chrX:48532233-48532539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
123-421
               

               
Cow position:
               
chrX:39220001-39220312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 34
               

               
Conread position:
               
123-424
               

               
Cow position:
               
chrX:36866092-36866400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
48, 66
               

               
Conread position:
               
125-359
               

               
Cow position:
               
chrX:11318044-11317813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
128-411
               

               
Cow position:
               
chrX:38208617-38208340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
141-424
               

               
Cow position:
               
chrX:296334-296619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
141-424
               

               
Cow position:
               
chrX:13121869-13122171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
141-424
               

               
Cow position:
               
chrX:25036926-25037219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 62
               

               
Conread position:
               
142-338
               

               
Cow position:
               
chrX:46429881-46429681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
6, 53
               

               
Conread position:
               
147-422
               

               
Cow position:
               
chrX:44339379-44339096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
157-397
               

               
Cow position:
               
chrX:44660630-44660388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
157-401
               

               
Cow position:
               
chrX:45488876-45489125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
98, 29
               

               
Conread position:
               
157-406
               

               
Cow position:
               
chrX:48473865-48474118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
157-415
               

               
Cow position:
               
chrX:47238195-47238456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
112, 24
               

               
Conread position:
               
157-422
               

               
Cow position:
               
chrX:44202089-44201820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
108, 46
               

               
Conread position:
               
157-422
               

               
Cow position:
               
chrX:44859905-44859637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
112, 29
               

               
Conread position:
               
157-422
               

               
Cow position:
               
chrX:46793788-46793525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
112, 29
               

               
Conread position:
               
158-420
               

               
Cow position:
               
chrX:45391755-45391490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
98, 28
               

               
Conread position:
               
161-420
               

               
Cow position:
               
chrX:48397866-48397603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
161-422
               

               
Cow position:
               
chrX:45254621-45254357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
161-422
               

               
Cow position:
               
chrX:48574608-48574872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
166-421
               

               
Cow position:
               
chrX:24749054-24749311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
171, 37
               

               
Conread position:
               
168-424
               

               
Cow position:
               
chrX:4109159-4109412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
168-424
               

               
Cow position:
               
chrX:17956664-17956916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 42
               

               
Conread position:
               
168-424
               

               
Cow position:
               
chrX:18964856-18964607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
195, 65
               

               
Conread position:
               
168-424
               

               
Cow position:
               
chrX:41941595-41941850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
168-424
               

               
Cow position:
               
chrX:42893886-42894149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 189
               

               
Conread position:
               
168-425
               

               
Cow position:
               
chrX:36367973-36367706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
172-359
               

               
Cow position:
               
chrX:20743575-20743762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
97, 172
               

               
Conread position:
               
172-428
               

               
Cow position:
               
chrX:48558720-48558977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
176-421
               

               
Cow position:
               
chrX:22393009-22392764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 146
               

               
Conread position:
               
176-424
               

               
Cow position:
               
chrX:6599807-6599547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
179-428
               

               
Cow position:
               
chrX:42836164-42836411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
182-411
               

               
Cow position:
               
chrX:19469524-19469301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
182-421
               

               
Cow position:
               
chrX:42450033-42449789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
183-422
               

               
Cow position:
               
chrX:35275969-35276211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
185-424
               

               
Cow position:
               
chrX:16836300-16836067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
186-420
               

               
Cow position:
               
chrX:43008595-43008833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
83, 7
               

               
Conread position:
               
186-424
               

               
Cow position:
               
chrX:3806670-3806906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
186-424
               

               
Cow position:
               
chrX:40336900-40337138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
154, 24
               

               
Conread position:
               
196-422
               

               
Cow position:
               
chrX:36109622-36109389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
196-424
               

               
Cow position:
               
chrX:28940235-28940471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
22, 159
               

               
Conread position:
               
198-424
               

               
Cow position:
               
chrX:27668960-27668735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
76, 11
               

               
Conread position:
               
200-422
               

               
Cow position:
               
chrX:29478723-29478947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
200-424
               

               
Cow position:
               
chrX:16984640-16984862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
74, 119
               

               
Conread position:
               
200-424
               

               
Cow position:
               
chrX:23335973-23335748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
151, 52
               

               
Conread position:
               
200-424
               

               
Cow position:
               
chrX:39290358-39290582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 128
               

               
Conread position:
               
202-423
               

               
Cow position:
               
chrX:2935958-2936179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 139
               

               
Conread position:
               
213-422
               

               
Cow position:
               
chrX:35392282-35392080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
214-422
               

               
Cow position:
               
chrX:3494809-3494596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
218-422
               

               
Cow position:
               
chrX:19761771-19761974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
52, 135
               

               
Conread position:
               
218-424
               

               
Cow position:
               
chrX:20583683-20583887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
56, 173
               

               
Conread position:
               
221-422
               

               
Cow position:
               
chrX:28067870-28068076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
246-424
               

               
Cow position:
               
chrX:23359066-23358890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
267-424
               

               
Cow position:
               
chrX:11589300-11589140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
267-424
               

               
Cow position:
               
chrX:19018764-19018601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
268-420
               

               
Cow position:
               
chrX:37752038-37751888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
268-421
               

               
Cow position:
               
chrX:11653838-11653991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
268-422
               

               
Cow position:
               
chrX:2314551-2314393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
268-422
               

               
Cow position:
               
chrX:26882012-26881854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
268-422
               

               
Cow position:
               
chrX:35285241-35285399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
268-424
               

               
Cow position:
               
chrX:1938082-1938240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
268-424
               

               
Cow position:
               
chrX:27270443-27270596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 123
               

               
Conread position:
               
268-424
               

               
Cow position:
               
chrX:35409820-35409979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
68, 34
               

               
Conread position:
               
268-428
               

               
Cow position:
               
chrX:41010966-41011121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chrX:35029857-35029709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
270-422
               

               
Cow position:
               
chrX:46909885-46910033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
272-424
               

               
Cow position:
               
chrX:17524312-17524156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
273-424
               

               
Cow position:
               
chrX:31279851-31279700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
275-414
               

               
Cow position:
               
chrX:34270636-34270778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
275-420
               

               
Cow position:
               
chrX:40556384-40556240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 91
               

               
Conread position:
               
275-422
               

               
Cow position:
               
chrX:43059176-43059031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 66
               

               
Conread position:
               
275-422
               

               
Cow position:
               
chrX:46068684-46068539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
275-423
               

               
Cow position:
               
chrX:41858807-41858658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chrX:51826-51675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chrX:14135753-14135902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
40, 44
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chrX:23497616-23497470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chrX:37867328-37867481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chrX:41454879-41454726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
275-425
               

               
Cow position:
               
chrX:39642547-39642400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
275-428
               

               
Cow position:
               
chrX:33678398-33678239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 125
               

               
Conread position:
               
276-414
               

               
Cow position:
               
chrX:30672314-30672167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
276-424
               

               
Cow position:
               
chrX:42875288-42875436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
278-422
               

               
Cow position:
               
chrX:17498400-17498548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
278-425
               

               
Cow position:
               
chrX:37717800-37717950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
280-422
               

               
Cow position:
               
chrX:19356543-19356689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
281-422
               

               
Cow position:
               
chrX:44995580-44995725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
282-421
               

               
Cow position:
               
chrX:43028314-43028453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
286-422
               

               
Cow position:
               
chrX:1996366-1996226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               
Show alignments to all cow chromosomes.