Cow genome map
| Conread name: | Emb1-C0005216_G08 |
| Conread position: | 304-587 |
| Cow position: | chr11:17151538-17151823 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 130 |
| Conread position: | 308-494 |
| Cow position: | chr11:41034660-41034853 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 315-524 |
| Cow position: | chr11:66188445-66188228 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 200 |
| Conread position: | 319-595 |
| Cow position: | chr11:48983009-48983276 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 83, 44 |
| Conread position: | 320-575 |
| Cow position: | chr11:39808874-39809124 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 75, 17 |
| Conread position: | 320-589 |
| Cow position: | chr11:70399743-70399994 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 320-601 |
| Cow position: | chr11:14308519-14308803 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 217 |
| Conread position: | 321-589 |
| Cow position: | chr11:37372192-37372465 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 88 |
| Conread position: | 323-586 |
| Cow position: | chr11:53262666-53262908 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 13, 31 |
| Conread position: | 323-595 |
| Cow position: | chr11:38845377-38845106 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 124, 83 |
| Conread position: | 324-555 |
| Cow position: | chr11:86577299-86577080 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 324-585 |
| Cow position: | chr11:47566053-47565787 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 82 |
| Conread position: | 324-587 |
| Cow position: | chr11:6194294-6194560 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 158, 65 |
| Conread position: | 324-588 |
| Cow position: | chr11:7002047-7001776 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 324-588 |
| Cow position: | chr11:84795864-84795599 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 324-589 |
| Cow position: | chr11:45889851-45890113 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 324-589 |
| Cow position: | chr11:53445663-53445924 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 86 |
| Conread position: | 325-420 |
| Cow position: | chr11:38871079-38871175 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 325-504 |
| Cow position: | chr11:75965762-75965582 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 127, 62 |
| Conread position: | 325-530 |
| Cow position: | chr11:4115173-4114974 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 90, 62 |
| Conread position: | 325-586 |
| Cow position: | chr11:19238268-19238016 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 325-587 |
| Cow position: | chr11:54244563-54244825 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 9, 75 |
| Conread position: | 325-588 |
| Cow position: | chr11:52832830-52832573 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 74 |
| Conread position: | 325-589 |
| Cow position: | chr11:32072037-32072297 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 75, 131 |
| Conread position: | 326-499 |
| Cow position: | chr11:53691123-53691297 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 109, 77 |
| Conread position: | 326-520 |
| Cow position: | chr11:7612774-7612580 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 326-535 |
| Cow position: | chr11:75242536-75242738 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 143, 52 |
| Conread position: | 326-589 |
| Cow position: | chr11:35881804-35882065 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 111 |
| Conread position: | 327-436 |
| Cow position: | chr11:35668825-35668714 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 327-451 |
| Cow position: | chr11:8846606-8846481 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 327-457 |
| Cow position: | chr11:7333832-7333702 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 65 |
| Conread position: | 327-469 |
| Cow position: | chr11:66265489-66265627 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 327-472 |
| Cow position: | chr11:30952624-30952480 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 327-475 |
| Cow position: | chr11:42232495-42232646 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 327-476 |
| Cow position: | chr11:30147404-30147553 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 87, 134 |
| Conread position: | 327-500 |
| Cow position: | chr11:35283029-35283204 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 14, 65 |
| Conread position: | 327-504 |
| Cow position: | chr11:65444956-65444773 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 327-511 |
| Cow position: | chr11:76395670-76395848 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 327-512 |
| Cow position: | chr11:25331850-25331668 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 327-513 |
| Cow position: | chr11:41104434-41104259 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 327-530 |
| Cow position: | chr11:12032016-12031820 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 128, 54 |
| Conread position: | 327-530 |
| Cow position: | chr11:80011948-80011753 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 327-533 |
| Cow position: | chr11:17964064-17963870 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 327-534 |
| Cow position: | chr11:46473791-46473595 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 161, 54 |
| Conread position: | 327-535 |
| Cow position: | chr11:65970349-65970556 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 153, 61 |
| Conread position: | 327-536 |
| Cow position: | chr11:2908661-2908866 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 327-537 |
| Cow position: | chr11:46413466-46413675 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 76, 40 |
| Conread position: | 327-539 |
| Cow position: | chr11:38009921-38009718 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 192, 36 |
| Conread position: | 327-554 |
| Cow position: | chr11:20491461-20491686 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 327-555 |
| Cow position: | chr11:56892711-56892938 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 25 |
| Conread position: | 327-572 |
| Cow position: | chr11:12950056-12949816 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 173 |
| Conread position: | 327-583 |
| Cow position: | chr11:50951444-50951703 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 179 |
| Conread position: | 327-585 |
| Cow position: | chr11:62019703-62019435 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 56, 147 |
| Conread position: | 327-585 |
| Cow position: | chr11:77683057-77683322 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 75, 101 |
| Conread position: | 327-586 |
| Cow position: | chr11:7683858-7684108 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 327-587 |
| Cow position: | chr11:32439062-32438800 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 43 |
| Conread position: | 327-587 |
| Cow position: | chr11:42519629-42519884 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 327-587 |
| Cow position: | chr11:51745245-51745495 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 327-588 |
| Cow position: | chr11:1668566-1668819 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 118, 54 |
| Conread position: | 327-588 |
| Cow position: | chr11:27681386-27681654 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 327-588 |
| Cow position: | chr11:46705639-46705386 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 76, 37 |
| Conread position: | 327-588 |
| Cow position: | chr11:78543825-78544083 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 66 |
| Conread position: | 327-589 |
| Cow position: | chr11:4609943-4609695 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 245, 70 |
| Conread position: | 327-589 |
| Cow position: | chr11:11752628-11752362 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 108, 71 |
| Conread position: | 327-589 |
| Cow position: | chr11:16000817-16001080 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 327-589 |
| Cow position: | chr11:31894168-31894426 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 36 |
| Conread position: | 327-589 |
| Cow position: | chr11:43526238-43525967 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 140 |
| Conread position: | 327-589 |
| Cow position: | chr11:55821815-55821563 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 150, 89 |
| Conread position: | 327-589 |
| Cow position: | chr11:81518281-81518026 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 33 |
| Conread position: | 327-595 |
| Cow position: | chr11:696457-696189 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 76, 65 |
| Conread position: | 327-595 |
| Cow position: | chr11:8828738-8828471 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 17 |
| Conread position: | 327-595 |
| Cow position: | chr11:26468036-26468308 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 67, 83 |
| Conread position: | 327-595 |
| Cow position: | chr11:43644211-43643928 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 327-595 |
| Cow position: | chr11:53452458-53452188 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 327-597 |
| Cow position: | chr11:48650685-48650947 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 68, 49 |
| Conread position: | 328-450 |
| Cow position: | chr11:24585069-24585192 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 328-485 |
| Cow position: | chr11:77705646-77705803 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 81, 148 |
| Conread position: | 328-508 |
| Cow position: | chr11:72375795-72375606 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 328-510 |
| Cow position: | chr11:5031883-5031699 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 124, 70 |
| Conread position: | 328-510 |
| Cow position: | chr11:11125553-11125740 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 124, 57 |
| Conread position: | 328-510 |
| Cow position: | chr11:42044099-42043920 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 154, 24 |
| Conread position: | 328-510 |
| Cow position: | chr11:67246683-67246862 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 151, 69 |
| Conread position: | 328-513 |
| Cow position: | chr11:28691868-28691676 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 328-515 |
| Cow position: | chr11:36658930-36658742 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 328-515 |
| Cow position: | chr11:43360892-43360703 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 114 |
| Conread position: | 328-516 |
| Cow position: | chr11:14470261-14470447 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 75, 39 |
| Conread position: | 328-520 |
| Cow position: | chr11:52983567-52983761 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 58 |
| Conread position: | 328-521 |
| Cow position: | chr11:46952841-46953034 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 24, 61 |
| Conread position: | 328-524 |
| Cow position: | chr11:377753-377552 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 119, 188 |
| Conread position: | 328-524 |
| Cow position: | chr11:6233989-6233790 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 123, 50 |
| Conread position: | 328-524 |
| Cow position: | chr11:18698768-18698969 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 121, 188 |
| Conread position: | 328-524 |
| Cow position: | chr11:21852413-21852212 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 71, 13 |
| Conread position: | 328-524 |
| Cow position: | chr11:61958854-61958655 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 44 |
| Conread position: | 328-524 |
| Cow position: | chr11:65607800-65607599 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 105, 58 |
| Conread position: | 328-526 |
| Cow position: | chr11:16540752-16540954 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 121, 71 |
| Conread position: | 328-531 |
| Cow position: | chr11:17278773-17278579 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 154, 24 |
| Conread position: | 328-531 |
| Cow position: | chr11:63435408-63435617 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 82 |
| Conread position: | 328-535 |
| Cow position: | chr11:40396213-40396413 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 328-538 |
| Cow position: | chr11:21473227-21473020 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 89 |
| Conread position: | 328-547 |
| Cow position: | chr11:68913033-68913255 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 89, 58 |
| Conread position: | 328-548 |
| Cow position: | chr11:34113154-34113377 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 121, 79 |
| Conread position: | 328-550 |
| Cow position: | chr11:33345334-33345560 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 210 |
| Conread position: | 328-585 |
| Cow position: | chr11:55761761-55762027 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 123, 71 |
| Conread position: | 328-588 |
| Cow position: | chr11:51729179-51729447 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 124, 17 |
| Conread position: | 328-589 |
| Cow position: | chr11:9874210-9874467 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 328-589 |
| Cow position: | chr11:18572692-18572957 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 110, 70 |
| Conread position: | 329-535 |
| Cow position: | chr11:51044039-51043830 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 132 |
| Conread position: | 329-544 |
| Cow position: | chr11:28395362-28395585 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 329-550 |
| Cow position: | chr11:35775230-35775453 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 105, 69 |
| Conread position: | 329-574 |
| Cow position: | chr11:67174613-67174846 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 67, 97 |
| Conread position: | 329-587 |
| Cow position: | chr11:16233044-16232782 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 26 |
| Conread position: | 329-589 |
| Cow position: | chr11:18144925-18144669 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 14 |
| Conread position: | 329-589 |
| Cow position: | chr11:21136704-21136968 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 329-589 |
| Cow position: | chr11:41272027-41272292 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 65, 103 |
| Conread position: | 329-589 |
| Cow position: | chr11:56821357-56821088 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 80, 17 |
| Conread position: | 329-595 |
| Cow position: | chr11:67871713-67871442 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 65, 39 |
| Conread position: | 329-601 |
| Cow position: | chr11:64904889-64905164 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 102, 70 |
| Conread position: | 330-508 |
| Cow position: | chr11:16262135-16261950 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 330-515 |
| Cow position: | chr11:40573440-40573255 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 115, 77 |
| Conread position: | 330-517 |
| Cow position: | chr11:31575892-31576081 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 330-520 |
| Cow position: | chr11:8148006-8147813 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 120, 61 |
| Conread position: | 330-531 |
| Cow position: | chr11:16907151-16906954 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 58 |
| Conread position: | 330-531 |
| Cow position: | chr11:49152844-49153045 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 124, 56 |
| Conread position: | 330-535 |
| Cow position: | chr11:47903746-47903943 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 330-548 |
| Cow position: | chr11:31354600-31354815 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 13, 70 |
| Conread position: | 330-554 |
| Cow position: | chr11:9253125-9252909 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 177, 57 |
| Conread position: | 330-589 |
| Cow position: | chr11:24967347-24967593 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 330-590 |
| Cow position: | chr11:83587926-83588182 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 330-595 |
| Cow position: | chr11:65988123-65988382 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 72 |
| Conread position: | 331-499 |
| Cow position: | chr11:53313677-53313508 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 103, 9 |
| Conread position: | 331-515 |
| Cow position: | chr11:63482532-63482350 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 153, 67 |
| Conread position: | 331-531 |
| Cow position: | chr11:29960189-29960392 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 183 |
| Conread position: | 331-533 |
| Cow position: | chr11:9083369-9083575 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 71, 86 |
| Conread position: | 331-586 |
| Cow position: | chr11:36701647-36701896 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 122, 46 |
| Conread position: | 331-589 |
| Cow position: | chr11:23047852-23047610 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 331-589 |
| Cow position: | chr11:38794440-38794686 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 116, 59 |
| Conread position: | 331-598 |
| Cow position: | chr11:37160680-37160953 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 69, 180 |
| Conread position: | 332-515 |
| Cow position: | chr11:82940727-82940543 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 65, 107 |
| Conread position: | 332-555 |
| Cow position: | chr11:38667924-38667705 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 10, 70 |
| Conread position: | 332-583 |
| Cow position: | chr11:59366184-59365926 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 332-589 |
| Cow position: | chr11:47193414-47193668 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 125, 60 |
| Conread position: | 332-593 |
| Cow position: | chr11:63157014-63156765 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 115, 61 |
| Conread position: | 333-509 |
| Cow position: | chr11:68422970-68423137 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 147 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 333-588 |
| Cow position: | chr11:19269178-19268938 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 334-595 |
| Cow position: | chr11:62574109-62573848 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 112, 70 |
| Conread position: | 335-530 |
| Cow position: | chr11:67745219-67745415 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 7, 176 |
| Conread position: | 336-530 |
| Cow position: | chr11:47169106-47168921 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 163, 45 |
| Conread position: | 337-520 |
| Cow position: | chr11:27765050-27765239 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 180 |
| Conread position: | 337-555 |
| Cow position: | chr11:60137593-60137810 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 337-588 |
| Cow position: | chr11:4060162-4059909 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 16, 75 |
| Conread position: | 337-595 |
| Cow position: | chr11:50937848-50937577 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 54, 30 |
| Conread position: | 339-553 |
| Cow position: | chr11:24243695-24243911 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 56, 170 |
| Conread position: | 341-595 |
| Cow position: | chr11:9368730-9368987 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 141, 172 |
| Conread position: | 342-518 |
| Cow position: | chr11:28681572-28681387 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 89, 44 |
| Conread position: | 342-538 |
| Cow position: | chr11:70097189-70097375 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 55, 142 |
| Conread position: | 344-588 |
| Cow position: | chr11:34946166-34945918 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 346-593 |
| Cow position: | chr11:67236310-67236554 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 13 |
| Conread position: | 347-595 |
| Cow position: | chr11:47125457-47125705 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 134, 104 |
| Conread position: | 349-475 |
| Cow position: | chr11:83404180-83404307 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 62 |
| Conread position: | 353-524 |
| Cow position: | chr11:32398552-32398725 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 99, 145 |
| Conread position: | 353-524 |
| Cow position: | chr11:84890805-84890628 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 164 |
| Conread position: | 353-530 |
| Cow position: | chr11:46024782-46024611 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 354-508 |
| Cow position: | chr11:35926990-35926835 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 355-554 |
| Cow position: | chr11:66401619-66401809 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 355-588 |
| Cow position: | chr11:50953649-50953410 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 355-595 |
| Cow position: | chr11:9055876-9056118 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 149 |
| Conread position: | 355-595 |
| Cow position: | chr11:62599130-62599363 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 130, 50 |
| Conread position: | 357-550 |
| Cow position: | chr11:25112600-25112402 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 46, 141 |
| Conread position: | 360-587 |
| Cow position: | chr11:19259592-19259360 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 362-554 |
| Cow position: | chr11:40232616-40232445 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 362-589 |
| Cow position: | chr11:1596531-1596308 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 39, 55 |
| Conread position: | 363-498 |
| Cow position: | chr11:25756246-25756381 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 363-595 |
| Cow position: | chr11:27722316-27722554 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 364-595 |
| Cow position: | chr11:52402389-52402624 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 83, 168 |
| Conread position: | 368-595 |
| Cow position: | chr11:20422292-20422068 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 132, 57 |
| Conread position: | 372-519 |
| Cow position: | chr11:70995203-70995057 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 372-553 |
| Cow position: | chr11:72082641-72082822 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 151 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 372-595 |
| Cow position: | chr11:11785265-11785494 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 378-589 |
| Cow position: | chr11:5648684-5648893 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 23, 130 |
| Conread position: | 379-518 |
| Cow position: | chr11:11059760-11059617 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 381-588 |
| Cow position: | chr11:62215252-62215039 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 383-530 |
| Cow position: | chr11:25861660-25861512 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 86 |
| Conread position: | 384-530 |
| Cow position: | chr11:55610292-55610438 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 384-589 |
| Cow position: | chr11:19501914-19502122 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 70, 99 |
| Conread position: | 386-587 |
| Cow position: | chr11:61427541-61427740 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 103 |
| Conread position: | 388-544 |
| Cow position: | chr11:73766838-73766684 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 112 |
| Conread position: | 390-555 |
| Cow position: | chr11:30471806-30471650 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 27 |
| Conread position: | 390-595 |
| Cow position: | chr11:76392066-76391865 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 391-546 |
| Cow position: | chr11:73499238-73499084 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 391-588 |
| Cow position: | chr11:29802634-29802441 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 122, 101 |
| Conread position: | 393-575 |
| Cow position: | chr11:14941651-14941470 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 393-587 |
| Cow position: | chr11:31422685-31422883 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 393-587 |
| Cow position: | chr11:63508369-63508563 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 394-554 |
| Cow position: | chr11:17452192-17452352 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 394-588 |
| Cow position: | chr11:40275645-40275448 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 15 |
| Conread position: | 394-588 |
| Cow position: | chr11:40279137-40278940 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 15 |
| Conread position: | 394-597 |
| Cow position: | chr11:65958745-65958537 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 396-587 |
| Cow position: | chr11:24625798-24625990 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 115 |
| Conread position: | 399-587 |
| Cow position: | chr11:13306859-13306671 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 400-585 |
| Cow position: | chr11:72035318-72035509 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 402-588 |
| Cow position: | chr11:14046113-14045926 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 59 |
| Conread position: | 407-587 |
| Cow position: | chr11:19606286-19606464 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 75, 93 |
| Conread position: | 408-587 |
| Cow position: | chr11:2394115-2393939 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 162, 75 |
| Conread position: | 414-545 |
| Cow position: | chr11:8232474-8232340 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 39, 113 |
| Conread position: | 416-589 |
| Cow position: | chr11:24216118-24216291 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 145 |
| Conread position: | 417-592 |
| Cow position: | chr11:13039194-13039023 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 419-589 |
| Cow position: | chr11:75255389-75255554 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 420-555 |
| Cow position: | chr11:13122030-13121895 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 420-585 |
| Cow position: | chr11:46699996-46700159 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 420-587 |
| Cow position: | chr11:34642248-34642084 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 151, 132 |
| Conread position: | 420-592 |
| Cow position: | chr11:17891892-17892059 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 428-589 |
| Cow position: | chr11:6729656-6729822 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 428-595 |
| Cow position: | chr11:44609554-44609721 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 48 |
| Conread position: | 429-588 |
| Cow position: | chr11:34136495-34136655 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 430-585 |
| Cow position: | chr11:53141719-53141571 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 434-586 |
| Cow position: | chr11:34422239-34422091 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 436-589 |
| Cow position: | chr11:373143-372990 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 438-595 |
| Cow position: | chr11:7333108-7332951 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 88 |
| Conread position: | 439-595 |
| Cow position: | chr11:5188133-5188287 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 150, 80 |
| Conread position: | 442-595 |
| Cow position: | chr11:67940910-67941063 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 148, 48 |
| Conread position: | 446-589 |
| Cow position: | chr11:49218337-49218193 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 449-589 |
| Cow position: | chr11:54058005-54058145 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 458-586 |
| Cow position: | chr11:76007403-76007530 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 463-587 |
| Cow position: | chr11:51389521-51389403 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 467-595 |
| Cow position: | chr11:76851805-76851676 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 474-589 |
| Cow position: | chr11:66265612-66265728 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 60 |
Show alignments to all cow chromosomes.