Cow genome map
| Conread name: | Emb1-C0005216_G08 |
| Conread position: | 276-512 |
| Cow position: | chr15:52389886-52389648 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 124, 140 |
| Conread position: | 300-439 |
| Cow position: | chr15:51583436-51583297 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 95, 16 |
| Conread position: | 313-593 |
| Cow position: | chr15:19725523-19725797 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 30, 79 |
| Conread position: | 315-472 |
| Cow position: | chr15:42103487-42103644 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 317-511 |
| Cow position: | chr15:4970581-4970769 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 320-456 |
| Cow position: | chr15:36671850-36671986 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 320-472 |
| Cow position: | chr15:33770806-33770652 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 320-589 |
| Cow position: | chr15:28236704-28236967 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 8, 154 |
| Conread position: | 320-593 |
| Cow position: | chr15:9494108-9494384 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 82, 31 |
| Conread position: | 321-505 |
| Cow position: | chr15:40343436-40343249 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 78, 163 |
| Conread position: | 321-571 |
| Cow position: | chr15:7962269-7962017 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 15, 60 |
| Conread position: | 323-475 |
| Cow position: | chr15:10815005-10815156 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 29 |
| Conread position: | 323-589 |
| Cow position: | chr15:52982002-52981758 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 324-505 |
| Cow position: | chr15:8414050-8414228 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 13, 76 |
| Conread position: | 324-524 |
| Cow position: | chr15:9001137-9000937 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 118, 135 |
| Conread position: | 324-583 |
| Cow position: | chr15:21836865-21836612 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 324-589 |
| Cow position: | chr15:34037011-34037269 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 324-595 |
| Cow position: | chr15:12170433-12170154 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 324-595 |
| Cow position: | chr15:20482661-20482936 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 92 |
| Conread position: | 325-514 |
| Cow position: | chr15:22713646-22713836 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 71 |
| Conread position: | 325-535 |
| Cow position: | chr15:31182608-31182403 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 78, 54 |
| Conread position: | 325-545 |
| Cow position: | chr15:40117258-40117487 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 9, 57 |
| Conread position: | 325-581 |
| Cow position: | chr15:27749002-27749251 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 240, 35 |
| Conread position: | 326-447 |
| Cow position: | chr15:25110987-25111108 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 43 |
| Conread position: | 326-589 |
| Cow position: | chr15:43612261-43612001 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 9, 90 |
| Conread position: | 327-478 |
| Cow position: | chr15:2210755-2210604 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 36 |
| Conread position: | 327-504 |
| Cow position: | chr15:26701896-26702071 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 91, 65 |
| Conread position: | 327-509 |
| Cow position: | chr15:7954119-7954310 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 48 |
| Conread position: | 327-517 |
| Cow position: | chr15:29900350-29900541 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 327-518 |
| Cow position: | chr15:4373657-4373474 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 74, 100 |
| Conread position: | 327-521 |
| Cow position: | chr15:43130497-43130297 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 327-530 |
| Cow position: | chr15:1830742-1830541 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 161, 64 |
| Conread position: | 327-530 |
| Cow position: | chr15:26734808-26734613 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 112, 58 |
| Conread position: | 327-530 |
| Cow position: | chr15:30934369-30934567 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 29, 86 |
| Conread position: | 327-535 |
| Cow position: | chr15:23957884-23957685 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 70, 96 |
| Conread position: | 327-538 |
| Cow position: | chr15:53118503-53118295 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 327-541 |
| Cow position: | chr15:4277884-4278094 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 327-549 |
| Cow position: | chr15:11957722-11957497 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 83 |
| Conread position: | 327-550 |
| Cow position: | chr15:43248590-43248820 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 67, 148 |
| Conread position: | 327-555 |
| Cow position: | chr15:3572519-3572748 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 327-555 |
| Cow position: | chr15:9178025-9178251 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 71 |
| Conread position: | 327-555 |
| Cow position: | chr15:26421418-26421647 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 327-557 |
| Cow position: | chr15:40498115-40498344 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 77, 22 |
| Conread position: | 327-585 |
| Cow position: | chr15:17213632-17213383 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 327-586 |
| Cow position: | chr15:14758071-14758329 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 98 |
| Conread position: | 327-586 |
| Cow position: | chr15:39894769-39894518 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 327-587 |
| Cow position: | chr15:5722486-5722740 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 35, 96 |
| Conread position: | 327-587 |
| Cow position: | chr15:6749667-6749926 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 30 |
| Conread position: | 327-588 |
| Cow position: | chr15:15215201-15214935 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 327-589 |
| Cow position: | chr15:3571960-3571701 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 75, 13 |
| Conread position: | 327-589 |
| Cow position: | chr15:8022230-8021973 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 30 |
| Conread position: | 327-589 |
| Cow position: | chr15:8937190-8936955 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 327-589 |
| Cow position: | chr15:22886731-22886475 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 327-589 |
| Cow position: | chr15:24411596-24411338 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 60 |
| Conread position: | 327-589 |
| Cow position: | chr15:35967308-35967566 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 78 |
| Conread position: | 327-589 |
| Cow position: | chr15:37918823-37918563 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 126, 76 |
| Conread position: | 327-593 |
| Cow position: | chr15:27863146-27863414 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 19 |
| Conread position: | 327-593 |
| Cow position: | chr15:42195088-42195349 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 77, 25 |
| Conread position: | 327-594 |
| Cow position: | chr15:24976996-24977262 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 327-595 |
| Cow position: | chr15:10568940-10569195 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 122, 41 |
| Conread position: | 327-595 |
| Cow position: | chr15:12163337-12163609 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 327-595 |
| Cow position: | chr15:22854585-22854322 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 172 |
| Conread position: | 327-595 |
| Cow position: | chr15:24285162-24284895 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 76, 65 |
| Conread position: | 327-595 |
| Cow position: | chr15:44252544-44252276 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 327-596 |
| Cow position: | chr15:31616822-31617097 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 327-617 |
| Cow position: | chr15:31545171-31545458 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 125, 72 |
| Conread position: | 328-510 |
| Cow position: | chr15:22939144-22939330 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 38 |
| Conread position: | 328-510 |
| Cow position: | chr15:29810298-29810118 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 154, 41 |
| Conread position: | 328-514 |
| Cow position: | chr15:5234823-5235005 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 154, 34 |
| Conread position: | 328-515 |
| Cow position: | chr15:5726504-5726316 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 71 |
| Conread position: | 328-515 |
| Cow position: | chr15:21893962-21893769 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 328-515 |
| Cow position: | chr15:49274132-49273949 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 124, 58 |
| Conread position: | 328-524 |
| Cow position: | chr15:794834-795040 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 328-524 |
| Cow position: | chr15:10660371-10660573 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 328-524 |
| Cow position: | chr15:13554534-13554335 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 121, 58 |
| Conread position: | 328-525 |
| Cow position: | chr15:9107216-9107016 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 92, 62 |
| Conread position: | 328-530 |
| Cow position: | chr15:36773518-36773717 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 328-531 |
| Cow position: | chr15:9781644-9781446 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 154, 39 |
| Conread position: | 328-531 |
| Cow position: | chr15:14176319-14176524 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 121, 58 |
| Conread position: | 328-531 |
| Cow position: | chr15:22871786-22871589 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 151, 72 |
| Conread position: | 328-531 |
| Cow position: | chr15:26919095-26919300 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 121, 62 |
| Conread position: | 328-531 |
| Cow position: | chr15:35440895-35441103 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 328-532 |
| Cow position: | chr15:39599622-39599420 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 154, 58 |
| Conread position: | 328-539 |
| Cow position: | chr15:10608125-10608336 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 121, 58 |
| Conread position: | 328-541 |
| Cow position: | chr15:36838993-36839208 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 328-545 |
| Cow position: | chr15:19812830-19812620 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 328-547 |
| Cow position: | chr15:39621521-39621296 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 64 |
| Conread position: | 328-589 |
| Cow position: | chr15:20422599-20422866 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 328-589 |
| Cow position: | chr15:26573558-26573297 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 124, 52 |
| Conread position: | 328-589 |
| Cow position: | chr15:50322776-50322510 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 124, 65 |
| Conread position: | 329-516 |
| Cow position: | chr15:13387259-13387066 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 329-530 |
| Cow position: | chr15:2669085-2668882 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 121, 79 |
| Conread position: | 329-578 |
| Cow position: | chr15:53045698-53045949 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 120, 69 |
| Conread position: | 329-587 |
| Cow position: | chr15:35425634-35425891 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 59, 75 |
| Conread position: | 329-588 |
| Cow position: | chr15:2144951-2145215 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 107 |
| Conread position: | 329-588 |
| Cow position: | chr15:27247681-27247424 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 86 |
| Conread position: | 329-589 |
| Cow position: | chr15:37931582-37931836 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 63, 79 |
| Conread position: | 329-589 |
| Cow position: | chr15:50177292-50177026 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 47, 63 |
| Conread position: | 330-519 |
| Cow position: | chr15:16585687-16585499 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 152 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 330-530 |
| Cow position: | chr15:10088496-10088295 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 120, 49 |
| Conread position: | 330-531 |
| Cow position: | chr15:49922314-49922109 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 119, 77 |
| Conread position: | 330-542 |
| Cow position: | chr15:26673413-26673617 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 123, 21 |
| Conread position: | 330-555 |
| Cow position: | chr15:37964713-37964489 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 212 |
| Conread position: | 330-584 |
| Cow position: | chr15:39326336-39326597 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 119, 93 |
| Conread position: | 330-585 |
| Cow position: | chr15:44879781-44879527 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 174, 86 |
| Conread position: | 330-587 |
| Cow position: | chr15:4508327-4508070 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 119, 63 |
| Conread position: | 330-588 |
| Cow position: | chr15:11646309-11646559 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 65, 119 |
| Conread position: | 330-589 |
| Cow position: | chr15:12036990-12036733 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 65, 195 |
| Conread position: | 330-589 |
| Cow position: | chr15:31599511-31599255 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 220 |
| Conread position: | 330-589 |
| Cow position: | chr15:36658954-36659186 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 144, 30 |
| Conread position: | 330-595 |
| Cow position: | chr15:31907826-31907562 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 154 |
| Conread position: | 331-451 |
| Cow position: | chr15:27892187-27892069 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 331-515 |
| Cow position: | chr15:20352008-20351823 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 123, 59 |
| Conread position: | 331-515 |
| Cow position: | chr15:26911899-26912081 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 150, 60 |
| Conread position: | 331-520 |
| Cow position: | chr15:9928537-9928345 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 118, 66 |
| Conread position: | 331-521 |
| Cow position: | chr15:42788970-42789163 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 116, 72 |
| Conread position: | 331-524 |
| Cow position: | chr15:16604000-16603807 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 65, 105 |
| Conread position: | 331-595 |
| Cow position: | chr15:48486811-48486552 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 332-444 |
| Cow position: | chr15:5527360-5527247 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 332-501 |
| Cow position: | chr15:27732584-27732417 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 63, 17 |
| Conread position: | 332-535 |
| Cow position: | chr15:4856964-4856770 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 332-588 |
| Cow position: | chr15:24864092-24864345 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 121 |
| Conread position: | 335-546 |
| Cow position: | chr15:33178251-33178465 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 337-524 |
| Cow position: | chr15:21803489-21803675 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 164, 54 |
| Conread position: | 337-524 |
| Cow position: | chr15:37645159-37644972 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 337-589 |
| Cow position: | chr15:10570441-10570696 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 127 |
| Conread position: | 338-550 |
| Cow position: | chr15:38323010-38322791 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 59, 36 |
| Conread position: | 340-535 |
| Cow position: | chr15:22833461-22833278 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 14, 52 |
| Conread position: | 345-589 |
| Cow position: | chr15:47821539-47821296 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 353-531 |
| Cow position: | chr15:9497344-9497525 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 96, 50 |
| Conread position: | 355-539 |
| Cow position: | chr15:6491437-6491625 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 92, 61 |
| Conread position: | 371-545 |
| Cow position: | chr15:32011732-32011904 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 32, 118 |
| Conread position: | 374-567 |
| Cow position: | chr15:35283331-35283531 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 374-587 |
| Cow position: | chr15:22605206-22605012 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 183, 42 |
| Conread position: | 374-588 |
| Cow position: | chr15:34255592-34255800 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 22, 126 |
| Conread position: | 374-595 |
| Cow position: | chr15:17788243-17788022 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 21, 155 |
| Conread position: | 376-595 |
| Cow position: | chr15:49237859-49238079 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 16, 180 |
| Conread position: | 378-533 |
| Cow position: | chr15:46005520-46005675 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 380-547 |
| Cow position: | chr15:50561269-50561438 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 381-589 |
| Cow position: | chr15:20370599-20370807 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 66, 16 |
| Conread position: | 382-592 |
| Cow position: | chr15:26933821-26934035 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 15, 5 |
| Conread position: | 383-589 |
| Cow position: | chr15:23992973-23992767 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 99, 63 |
| Conread position: | 384-589 |
| Cow position: | chr15:30958092-30958293 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 68, 14 |
| Conread position: | 386-589 |
| Cow position: | chr15:23109159-23109366 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 388-589 |
| Cow position: | chr15:39200902-39200701 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 389-496 |
| Cow position: | chr15:48713611-48713721 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 392-585 |
| Cow position: | chr15:10303340-10303143 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 393-536 |
| Cow position: | chr15:23140015-23140154 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 393-582 |
| Cow position: | chr15:10698453-10698623 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 394-593 |
| Cow position: | chr15:20778133-20777930 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 413-589 |
| Cow position: | chr15:2117978-2117802 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 116 |
| Conread position: | 415-595 |
| Cow position: | chr15:10189454-10189276 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 175, 113 |
| Conread position: | 416-568 |
| Cow position: | chr15:4216052-4216199 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 418-555 |
| Cow position: | chr15:28177541-28177405 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 419-589 |
| Cow position: | chr15:23547902-23548070 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 428-541 |
| Cow position: | chr15:35663532-35663415 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 429-589 |
| Cow position: | chr15:5527193-5527031 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 431-589 |
| Cow position: | chr15:39916769-39916609 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 432-586 |
| Cow position: | chr15:7059327-7059484 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 119 |
| Conread position: | 432-588 |
| Cow position: | chr15:19323394-19323241 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 44 |
| Conread position: | 435-595 |
| Cow position: | chr15:52389668-52389503 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 442-589 |
| Cow position: | chr15:51583103-51582960 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 445-595 |
| Cow position: | chr15:14323355-14323503 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 133, 78 |
| Conread position: | 490-588 |
| Cow position: | chr15:45661378-45661475 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.