Cow genome map
| Conread name: | Emb1-C0005216_G08 |
| Conread position: | 302-550 |
| Cow position: | chr16:44898865-44898622 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 47 |
| Conread position: | 314-595 |
| Cow position: | chr16:51652564-51652846 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 127 |
| Conread position: | 315-521 |
| Cow position: | chr16:18072069-18072277 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 137 |
| Conread position: | 316-451 |
| Cow position: | chr16:13027569-13027703 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 316-573 |
| Cow position: | chr16:44723130-44722879 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 137, 36 |
| Conread position: | 316-595 |
| Cow position: | chr16:34210511-34210231 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 320-486 |
| Cow position: | chr16:17606196-17606367 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 56 |
| Conread position: | 320-539 |
| Cow position: | chr16:28267112-28266908 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 320-589 |
| Cow position: | chr16:26156236-26155970 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 321-524 |
| Cow position: | chr16:4399638-4399843 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 128, 79 |
| Conread position: | 321-589 |
| Cow position: | chr16:48493080-48493353 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 128, 195 |
| Conread position: | 321-589 |
| Cow position: | chr16:49511480-49511756 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 149, 217 |
| Conread position: | 322-589 |
| Cow position: | chr16:18557361-18557091 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 119, 69 |
| Conread position: | 323-526 |
| Cow position: | chr16:4979711-4979912 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 80, 29 |
| Conread position: | 323-587 |
| Cow position: | chr16:42312290-42312554 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 17 |
| Conread position: | 323-593 |
| Cow position: | chr16:16524455-16524193 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 133 |
| Conread position: | 324-548 |
| Cow position: | chr16:19976880-19977095 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 324-586 |
| Cow position: | chr16:15938624-15938362 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 17, 75 |
| Conread position: | 325-495 |
| Cow position: | chr16:46253782-46253607 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 325-535 |
| Cow position: | chr16:49579991-49580190 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 325-541 |
| Cow position: | chr16:26373041-26372826 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 127, 16 |
| Conread position: | 325-588 |
| Cow position: | chr16:1440343-1440598 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 71, 112 |
| Conread position: | 326-493 |
| Cow position: | chr16:16402413-16402250 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 83, 11 |
| Conread position: | 326-589 |
| Cow position: | chr16:54426068-54426333 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 54, 117 |
| Conread position: | 327-436 |
| Cow position: | chr16:25463683-25463792 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 67, 99 |
| Conread position: | 327-450 |
| Cow position: | chr16:23990575-23990450 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 327-456 |
| Cow position: | chr16:27005110-27005238 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 80 |
| Conread position: | 327-493 |
| Cow position: | chr16:47385151-47384988 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 120, 25 |
| Conread position: | 327-497 |
| Cow position: | chr16:5789838-5789669 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 67, 83 |
| Conread position: | 327-515 |
| Cow position: | chr16:41608520-41608706 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 154 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 67, 127 |
| Conread position: | 327-517 |
| Cow position: | chr16:11153283-11153091 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 160 |
| Conread position: | 327-517 |
| Cow position: | chr16:25127124-25127300 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 327-526 |
| Cow position: | chr16:37924260-37924068 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 16, 76 |
| Conread position: | 327-530 |
| Cow position: | chr16:20685532-20685346 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 327-530 |
| Cow position: | chr16:52683306-52683499 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 327-533 |
| Cow position: | chr16:12169783-12169588 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 327-533 |
| Cow position: | chr16:51880078-51879887 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 327-534 |
| Cow position: | chr16:42257357-42257565 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 327-535 |
| Cow position: | chr16:52218989-52219189 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 327-538 |
| Cow position: | chr16:4499343-4499550 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 327-550 |
| Cow position: | chr16:52222420-52222198 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 206 |
| Conread position: | 327-555 |
| Cow position: | chr16:47368668-47368896 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 10 |
| Conread position: | 327-556 |
| Cow position: | chr16:4322372-4322585 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 327-570 |
| Cow position: | chr16:55586692-55586457 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 327-575 |
| Cow position: | chr16:32837640-32837390 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 101 |
| Conread position: | 327-584 |
| Cow position: | chr16:12072548-12072802 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 327-585 |
| Cow position: | chr16:36930412-36930150 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 26, 98 |
| Conread position: | 327-587 |
| Cow position: | chr16:31419350-31419619 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 327-587 |
| Cow position: | chr16:54515632-54515889 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 327-588 |
| Cow position: | chr16:26134460-26134202 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 94, 32 |
| Conread position: | 327-588 |
| Cow position: | chr16:27013805-27014072 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 67, 25 |
| Conread position: | 327-588 |
| Cow position: | chr16:38620865-38621126 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 70 |
| Conread position: | 327-588 |
| Cow position: | chr16:53267631-53267894 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 74, 177 |
| Conread position: | 327-589 |
| Cow position: | chr16:18427093-18427352 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 226 |
| Conread position: | 327-589 |
| Cow position: | chr16:51070011-51069743 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 71, 96 |
| Conread position: | 327-595 |
| Cow position: | chr16:13660327-13660055 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 67, 123 |
| Conread position: | 327-595 |
| Cow position: | chr16:16056141-16055882 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 114, 35 |
| Conread position: | 327-595 |
| Cow position: | chr16:45693053-45693322 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 146 |
| Conread position: | 327-595 |
| Cow position: | chr16:52577370-52577637 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 69, 25 |
| Conread position: | 327-596 |
| Cow position: | chr16:30639250-30639505 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 327-604 |
| Cow position: | chr16:16545984-16546254 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 25 |
| Conread position: | 328-451 |
| Cow position: | chr16:13792753-13792628 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 328-504 |
| Cow position: | chr16:9933067-9933246 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 57, 81 |
| Conread position: | 328-505 |
| Cow position: | chr16:15960383-15960201 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 45 |
| Conread position: | 328-505 |
| Cow position: | chr16:18141420-18141238 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 328-509 |
| Cow position: | chr16:18052239-18052424 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 50, 70 |
| Conread position: | 328-510 |
| Cow position: | chr16:5415849-5415666 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 131, 60 |
| Conread position: | 328-510 |
| Cow position: | chr16:7619269-7619089 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 155, 64 |
| Conread position: | 328-510 |
| Cow position: | chr16:13611545-13611359 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 121, 58 |
| Conread position: | 328-518 |
| Cow position: | chr16:16548518-16548712 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 166 |
| Conread position: | 328-520 |
| Cow position: | chr16:23738088-23738285 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 64, 41 |
| Conread position: | 328-524 |
| Cow position: | chr16:20633970-20633768 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 68, 89 |
| Conread position: | 328-524 |
| Cow position: | chr16:27160957-27160756 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 328-524 |
| Cow position: | chr16:30037083-30036883 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 80, 187 |
| Conread position: | 328-524 |
| Cow position: | chr16:42242207-42242010 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 124, 61 |
| Conread position: | 328-524 |
| Cow position: | chr16:56796757-56796558 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 121, 62 |
| Conread position: | 328-530 |
| Cow position: | chr16:4910618-4910413 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 121, 184 |
| Conread position: | 328-530 |
| Cow position: | chr16:43801010-43800807 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 87 |
| Conread position: | 328-531 |
| Cow position: | chr16:8933515-8933313 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 58 |
| Conread position: | 328-531 |
| Cow position: | chr16:9973590-9973384 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 47, 65 |
| Conread position: | 328-531 |
| Cow position: | chr16:48545729-48545936 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 123, 51 |
| Conread position: | 328-547 |
| Cow position: | chr16:7665545-7665769 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 62, 51 |
| Conread position: | 328-547 |
| Cow position: | chr16:49169476-49169249 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 69, 185 |
| Conread position: | 328-554 |
| Cow position: | chr16:29037820-29038053 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 62, 186 |
| Conread position: | 328-582 |
| Cow position: | chr16:23066569-23066820 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 75, 141 |
| Conread position: | 328-586 |
| Cow position: | chr16:689615-689872 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 328-587 |
| Cow position: | chr16:41689605-41689861 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 121, 64 |
| Conread position: | 328-589 |
| Cow position: | chr16:5020153-5019909 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 328-589 |
| Cow position: | chr16:10148189-10148458 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 123, 184 |
| Conread position: | 328-589 |
| Cow position: | chr16:11008252-11008519 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 121, 172 |
| Conread position: | 328-595 |
| Cow position: | chr16:27723121-27723408 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 328-595 |
| Cow position: | chr16:54226690-54226416 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 124, 185 |
| Conread position: | 329-470 |
| Cow position: | chr16:8236413-8236274 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 329-550 |
| Cow position: | chr16:9444871-9445093 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 103, 38 |
| Conread position: | 329-555 |
| Cow position: | chr16:10303838-10303612 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 121 |
| Conread position: | 329-555 |
| Cow position: | chr16:22872462-22872242 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 55, 118 |
| Conread position: | 329-594 |
| Cow position: | chr16:15808884-15809156 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 98, 203 |
| Conread position: | 329-595 |
| Cow position: | chr16:20260402-20260651 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 129, 11 |
| Conread position: | 329-603 |
| Cow position: | chr16:21461939-21462212 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 106, 112 |
| Conread position: | 330-503 |
| Cow position: | chr16:50289060-50289239 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 330-504 |
| Cow position: | chr16:17982231-17982055 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 128 |
| Conread position: | 330-511 |
| Cow position: | chr16:8323072-8322886 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 119, 56 |
| Conread position: | 330-595 |
| Cow position: | chr16:6344532-6344260 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 73, 122 |
| Conread position: | 330-595 |
| Cow position: | chr16:14974622-14974370 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 151, 22 |
| Conread position: | 331-515 |
| Cow position: | chr16:7549878-7550066 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 121, 184 |
| Conread position: | 331-515 |
| Cow position: | chr16:34754049-34753861 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 84, 56 |
| Conread position: | 331-521 |
| Cow position: | chr16:20025358-20025546 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 58 |
| Conread position: | 331-533 |
| Cow position: | chr16:50014440-50014637 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 331-555 |
| Cow position: | chr16:37719069-37719297 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 118, 25 |
| Conread position: | 331-589 |
| Cow position: | chr16:228576-228325 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 71, 35 |
| Conread position: | 331-589 |
| Cow position: | chr16:11085471-11085209 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 102, 171 |
| Conread position: | 331-589 |
| Cow position: | chr16:45047718-45047464 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 116, 55 |
| Conread position: | 331-594 |
| Cow position: | chr16:16265188-16264921 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 96, 62 |
| Conread position: | 332-515 |
| Cow position: | chr16:42752765-42752948 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 118, 58 |
| Conread position: | 332-589 |
| Cow position: | chr16:44581160-44580904 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 333-595 |
| Cow position: | chr16:8704194-8704435 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 257, 7 |
| Conread position: | 334-555 |
| Cow position: | chr16:15320557-15320345 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 335-538 |
| Cow position: | chr16:52276613-52276408 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 336-550 |
| Cow position: | chr16:41711598-41711805 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 148, 52 |
| Conread position: | 336-593 |
| Cow position: | chr16:16946622-16946355 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 337-511 |
| Cow position: | chr16:13601163-13600987 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 63, 89 |
| Conread position: | 337-589 |
| Cow position: | chr16:19003168-19002919 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 339-458 |
| Cow position: | chr16:29618064-29618183 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 347-595 |
| Cow position: | chr16:56445486-56445243 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 92, 174 |
| Conread position: | 353-554 |
| Cow position: | chr16:51281404-51281620 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 80, 171 |
| Conread position: | 353-586 |
| Cow position: | chr16:43082301-43082072 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 26, 153 |
| Conread position: | 355-585 |
| Cow position: | chr16:11661970-11662201 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 356-589 |
| Cow position: | chr16:28454354-28454128 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 197 |
| Conread position: | 359-511 |
| Cow position: | chr16:37277864-37278017 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 82, 135 |
| Conread position: | 359-595 |
| Cow position: | chr16:33121556-33121783 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 75, 35 |
| Conread position: | 360-586 |
| Cow position: | chr16:28827238-28827008 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 87, 37 |
| Conread position: | 364-524 |
| Cow position: | chr16:7394990-7394823 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 366-541 |
| Cow position: | chr16:56104967-56104789 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 37, 146 |
| Conread position: | 371-519 |
| Cow position: | chr16:12738268-12738418 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 374-589 |
| Cow position: | chr16:44324-44536 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 64, 131 |
| Conread position: | 386-595 |
| Cow position: | chr16:15805919-15806131 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 117 |
| Conread position: | 387-569 |
| Cow position: | chr16:47909375-47909190 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 388-558 |
| Cow position: | chr16:53420312-53420480 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 392-535 |
| Cow position: | chr16:36537998-36538138 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 392-569 |
| Cow position: | chr16:5511775-5511959 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 393-550 |
| Cow position: | chr16:23163603-23163442 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 393-586 |
| Cow position: | chr16:2619007-2618818 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 399-588 |
| Cow position: | chr16:49320943-49321126 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 401-549 |
| Cow position: | chr16:25043985-25044136 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 48 |
| Conread position: | 416-587 |
| Cow position: | chr16:31490315-31490485 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 421-586 |
| Cow position: | chr16:5580314-5580484 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 422-589 |
| Cow position: | chr16:9510869-9510702 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 422-589 |
| Cow position: | chr16:30929882-30930051 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 422-589 |
| Cow position: | chr16:50114187-50114360 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 423-589 |
| Cow position: | chr16:3566171-3566334 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 427-585 |
| Cow position: | chr16:9407868-9407710 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 427-587 |
| Cow position: | chr16:25464066-25464220 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 429-589 |
| Cow position: | chr16:31222551-31222708 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 437-598 |
| Cow position: | chr16:10617834-10617672 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 438-548 |
| Cow position: | chr16:23978412-23978302 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 438-595 |
| Cow position: | chr16:47116091-47116244 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 151, 114 |
| Conread position: | 439-597 |
| Cow position: | chr16:56282969-56283127 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 151, 51 |
| Conread position: | 440-586 |
| Cow position: | chr16:327941-327793 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 85 |
| Conread position: | 443-589 |
| Cow position: | chr16:17617111-17616970 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 6, 64 |
| Conread position: | 445-595 |
| Cow position: | chr16:10611596-10611454 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 145, 103 |
| Conread position: | 451-587 |
| Cow position: | chr16:52565454-52565589 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 453-588 |
| Cow position: | chr16:4708865-4708730 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 454-589 |
| Cow position: | chr16:29094894-29095031 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 457-587 |
| Cow position: | chr16:49122225-49122096 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.