Cow genome map
| Conread name: | Emb1-C0005216_G08 |
| Conread position: | 280-589 |
| Cow position: | chr21:13736978-13737282 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 140, 83 |
| Conread position: | 299-547 |
| Cow position: | chr21:10538308-10538060 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 37, 54 |
| Conread position: | 303-509 |
| Cow position: | chr21:31159349-31159554 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 38, 89 |
| Conread position: | 309-612 |
| Cow position: | chr21:40769242-40769540 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 312-575 |
| Cow position: | chr21:37718488-37718230 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 314-535 |
| Cow position: | chr21:24759003-24759226 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 314-589 |
| Cow position: | chr21:24674684-24674951 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 316-588 |
| Cow position: | chr21:8420584-8420852 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 316-597 |
| Cow position: | chr21:18378798-18379087 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 318-595 |
| Cow position: | chr21:25800358-25800637 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 93, 240 |
| Conread position: | 320-486 |
| Cow position: | chr21:24703641-24703807 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 10 |
| Conread position: | 320-512 |
| Cow position: | chr21:28997937-28997752 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 162 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 8, 98 |
| Conread position: | 320-535 |
| Cow position: | chr21:28993658-28993450 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 140 |
| Conread position: | 320-573 |
| Cow position: | chr21:41583235-41583492 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 8, 62 |
| Conread position: | 321-514 |
| Cow position: | chr21:37886375-37886564 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 321-541 |
| Cow position: | chr21:46552140-46551914 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 321-589 |
| Cow position: | chr21:21181141-21181412 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 7, 197 |
| Conread position: | 323-451 |
| Cow position: | chr21:30150299-30150170 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 323-588 |
| Cow position: | chr21:47823309-47823029 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 72, 227 |
| Conread position: | 323-589 |
| Cow position: | chr21:31004696-31004439 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 172, 40 |
| Conread position: | 324-440 |
| Cow position: | chr21:49662156-49662039 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 324-501 |
| Cow position: | chr21:37121266-37121092 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 64, 111 |
| Conread position: | 324-587 |
| Cow position: | chr21:36371454-36371714 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 0 |
| Conread position: | 324-589 |
| Cow position: | chr21:32574691-32574956 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 147, 35 |
| Conread position: | 324-595 |
| Cow position: | chr21:15239251-15239519 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 51 |
| Conread position: | 325-433 |
| Cow position: | chr21:20426497-20426605 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 35 |
| Conread position: | 325-435 |
| Cow position: | chr21:2412731-2412840 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 325-470 |
| Cow position: | chr21:44764464-44764323 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 325-513 |
| Cow position: | chr21:23499859-23499668 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 325-554 |
| Cow position: | chr21:6058672-6058447 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 325-587 |
| Cow position: | chr21:12087560-12087829 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 109, 35 |
| Conread position: | 325-595 |
| Cow position: | chr21:44754811-44754547 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 326-546 |
| Cow position: | chr21:31200145-31200351 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 326-556 |
| Cow position: | chr21:13256530-13256311 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 14, 62 |
| Conread position: | 327-509 |
| Cow position: | chr21:38774155-38774346 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 327-517 |
| Cow position: | chr21:24865129-24865307 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 63, 106 |
| Conread position: | 327-517 |
| Cow position: | chr21:37845790-37845599 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 76, 43 |
| Conread position: | 327-525 |
| Cow position: | chr21:32904184-32903983 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 71, 35 |
| Conread position: | 327-530 |
| Cow position: | chr21:42053295-42053103 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 131, 56 |
| Conread position: | 327-548 |
| Cow position: | chr21:24698451-24698675 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 25 |
| Conread position: | 327-549 |
| Cow position: | chr21:37848209-37848419 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 172, 67 |
| Conread position: | 327-555 |
| Cow position: | chr21:34565241-34565013 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 141 |
| Conread position: | 327-556 |
| Cow position: | chr21:23786001-23786233 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 114, 205 |
| Conread position: | 327-571 |
| Cow position: | chr21:35997145-35997389 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 327-578 |
| Cow position: | chr21:9353415-9353672 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 327-585 |
| Cow position: | chr21:25286485-25286745 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 70, 59 |
| Conread position: | 327-589 |
| Cow position: | chr21:11676077-11675818 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 25 |
| Conread position: | 327-589 |
| Cow position: | chr21:15742120-15741849 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 76, 83 |
| Conread position: | 327-589 |
| Cow position: | chr21:41514775-41515029 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 327-589 |
| Cow position: | chr21:47715572-47715310 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 27, 51 |
| Conread position: | 327-593 |
| Cow position: | chr21:4723457-4723721 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 74, 25 |
| Conread position: | 327-593 |
| Cow position: | chr21:21140497-21140742 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 327-595 |
| Cow position: | chr21:4098841-4099108 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 327-595 |
| Cow position: | chr21:4276619-4276361 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 122, 25 |
| Conread position: | 327-595 |
| Cow position: | chr21:31662436-31662708 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 81, 31 |
| Conread position: | 327-595 |
| Cow position: | chr21:33947279-33947013 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 26 |
| Conread position: | 328-501 |
| Cow position: | chr21:43357286-43357108 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 67, 42 |
| Conread position: | 328-502 |
| Cow position: | chr21:30607117-30606937 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 328-503 |
| Cow position: | chr21:16981849-16982025 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 328-504 |
| Cow position: | chr21:1591524-1591705 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 328-504 |
| Cow position: | chr21:34151556-34151736 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 58 |
| Conread position: | 328-510 |
| Cow position: | chr21:9416220-9416409 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 328-510 |
| Cow position: | chr21:15911372-15911558 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 328-510 |
| Cow position: | chr21:42135648-42135458 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 328-514 |
| Cow position: | chr21:10004915-10004726 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 139 |
| Conread position: | 328-515 |
| Cow position: | chr21:868953-868762 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 120, 41 |
| Conread position: | 328-515 |
| Cow position: | chr21:18790587-18790404 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 123, 71 |
| Conread position: | 328-515 |
| Cow position: | chr21:22210272-22210084 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 328-524 |
| Cow position: | chr21:1511263-1511460 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 328-524 |
| Cow position: | chr21:15544246-15544058 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 124, 58 |
| Conread position: | 328-524 |
| Cow position: | chr21:20160650-20160847 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 71 |
| Conread position: | 328-524 |
| Cow position: | chr21:41974403-41974207 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 154, 65 |
| Conread position: | 328-524 |
| Cow position: | chr21:42841628-42841426 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 328-524 |
| Cow position: | chr21:46849155-46848957 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 117, 65 |
| Conread position: | 328-529 |
| Cow position: | chr21:49649603-49649804 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 142 |
| Conread position: | 328-531 |
| Cow position: | chr21:3818181-3818386 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 8, 62 |
| Conread position: | 328-531 |
| Cow position: | chr21:4399775-4399981 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 121, 60 |
| Conread position: | 328-531 |
| Cow position: | chr21:26244892-26245092 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 121, 24 |
| Conread position: | 328-531 |
| Cow position: | chr21:32339765-32339562 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 121, 58 |
| Conread position: | 328-531 |
| Cow position: | chr21:36795572-36795781 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 328-531 |
| Cow position: | chr21:40266096-40266299 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 154, 58 |
| Conread position: | 328-535 |
| Cow position: | chr21:16270685-16270883 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 104, 56 |
| Conread position: | 328-546 |
| Cow position: | chr21:12461998-12461773 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 64, 193 |
| Conread position: | 328-589 |
| Cow position: | chr21:20418712-20418452 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 188 |
| Conread position: | 328-589 |
| Cow position: | chr21:42209659-42209391 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 328-589 |
| Cow position: | chr21:45355808-45356069 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 129, 40 |
| Conread position: | 328-595 |
| Cow position: | chr21:23397876-23397610 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 215 |
| Conread position: | 328-595 |
| Cow position: | chr21:33997255-33996989 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 34 |
| Conread position: | 329-523 |
| Cow position: | chr21:45923671-45923486 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 329-531 |
| Cow position: | chr21:29978787-29978582 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 122, 59 |
| Conread position: | 329-556 |
| Cow position: | chr21:11019358-11019597 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 329-572 |
| Cow position: | chr21:26753469-26753709 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 117, 48 |
| Conread position: | 329-589 |
| Cow position: | chr21:23801155-23800898 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 123, 75 |
| Conread position: | 329-592 |
| Cow position: | chr21:3254124-3254390 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 30 |
| Conread position: | 329-595 |
| Cow position: | chr21:39509416-39509147 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 193 |
| Conread position: | 330-524 |
| Cow position: | chr21:1059052-1059246 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 55 |
| Conread position: | 330-531 |
| Cow position: | chr21:30835337-30835541 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 56, 184 |
| Conread position: | 330-586 |
| Cow position: | chr21:8184256-8184519 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 67, 127 |
| Conread position: | 330-588 |
| Cow position: | chr21:31661979-31662233 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 19 |
| Conread position: | 330-589 |
| Cow position: | chr21:6316189-6316445 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 194 |
| Conread position: | 330-589 |
| Cow position: | chr21:9940216-9939954 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 61, 49 |
| Conread position: | 330-589 |
| Cow position: | chr21:33727491-33727226 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 110, 183 |
| Conread position: | 330-595 |
| Cow position: | chr21:46607610-46607351 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 73, 22 |
| Conread position: | 331-510 |
| Cow position: | chr21:395845-396025 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 118, 55 |
| Conread position: | 331-524 |
| Cow position: | chr21:33982831-33982639 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 120, 71 |
| Conread position: | 331-531 |
| Cow position: | chr21:21169517-21169318 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 331-546 |
| Cow position: | chr21:641561-641781 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 77, 55 |
| Conread position: | 331-587 |
| Cow position: | chr21:22353256-22353004 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 116, 32 |
| Conread position: | 331-589 |
| Cow position: | chr21:17428477-17428731 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 118, 32 |
| Conread position: | 332-589 |
| Cow position: | chr21:8206744-8207011 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 62, 160 |
| Conread position: | 333-508 |
| Cow position: | chr21:35062067-35062237 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 73, 13 |
| Conread position: | 333-589 |
| Cow position: | chr21:18941855-18941599 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 117, 30 |
| Conread position: | 334-471 |
| Cow position: | chr21:9400786-9400646 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 335-573 |
| Cow position: | chr21:37235364-37235605 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 77, 33 |
| Conread position: | 335-589 |
| Cow position: | chr21:38900757-38901017 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 117, 32 |
| Conread position: | 336-510 |
| Cow position: | chr21:28733934-28733755 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 337-465 |
| Cow position: | chr21:6621339-6621212 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 337-520 |
| Cow position: | chr21:19258805-19258985 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 145, 49 |
| Conread position: | 337-589 |
| Cow position: | chr21:21223268-21223516 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 64, 9 |
| Conread position: | 337-595 |
| Cow position: | chr21:12301535-12301269 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 57, 196 |
| Conread position: | 338-536 |
| Cow position: | chr21:1885810-1885608 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 341-589 |
| Cow position: | chr21:34739827-34740080 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 353-600 |
| Cow position: | chr21:13358317-13358576 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 37, 59 |
| Conread position: | 355-555 |
| Cow position: | chr21:31576494-31576693 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 358-589 |
| Cow position: | chr21:48291052-48290823 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 366-556 |
| Cow position: | chr21:23767879-23768072 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 75, 166 |
| Conread position: | 383-547 |
| Cow position: | chr21:7483325-7483154 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 389-586 |
| Cow position: | chr21:19860137-19859938 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 393-589 |
| Cow position: | chr21:8671432-8671626 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 143 |
| Conread position: | 399-589 |
| Cow position: | chr21:13418189-13418004 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 403-555 |
| Cow position: | chr21:49654116-49654269 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 16 |
| Conread position: | 403-595 |
| Cow position: | chr21:8282321-8282505 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 186, 16 |
| Conread position: | 407-589 |
| Cow position: | chr21:27480498-27480679 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 102, 42 |
| Conread position: | 409-575 |
| Cow position: | chr21:18782290-18782452 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 410-589 |
| Cow position: | chr21:44220421-44220600 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 74, 33 |
| Conread position: | 421-589 |
| Cow position: | chr21:37121142-37120977 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 421-595 |
| Cow position: | chr21:17807070-17806897 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 147 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 169, 136 |
| Conread position: | 422-589 |
| Cow position: | chr21:23397598-23397430 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 427-549 |
| Cow position: | chr21:9588299-9588418 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 428-595 |
| Cow position: | chr21:41197971-41197810 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 144, 55 |
| Conread position: | 431-587 |
| Cow position: | chr21:26147151-26147311 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 435-589 |
| Cow position: | chr21:7186880-7187022 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 437-595 |
| Cow position: | chr21:28997769-28997611 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 6, 43 |
| Conread position: | 439-571 |
| Cow position: | chr21:44789269-44789137 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 439-586 |
| Cow position: | chr21:30150155-30150011 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 443-590 |
| Cow position: | chr21:30053332-30053184 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 68 |
| Conread position: | 446-595 |
| Cow position: | chr21:698900-699047 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 448-589 |
| Cow position: | chr21:23974181-23974041 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 466-584 |
| Cow position: | chr21:33714241-33714357 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
Show alignments to all cow chromosomes.