Cow genome map

Conread name: Emb1-C0005216_G08

Conread position: 312-587
Cow position: chr24:15617604-15617330 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 22, 11

Conread position: 315-595
Cow position: chr24:7079663-7079937 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 134, 28

Conread position: 315-595
Cow position: chr24:28335693-28335409 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 317-541
Cow position: chr24:11456968-11456742 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 214

Conread position: 318-589
Cow position: chr24:27054283-27054554 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 73, 22

Conread position: 320-586
Cow position: chr24:6061522-6061238 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 8, 55

Conread position: 320-595
Cow position: chr24:7401343-7401086 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 141

Conread position: 320-595
Cow position: chr24:18787044-18786775 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 182

Conread position: 321-501
Cow position: chr24:18393648-18393464 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 126, 0

Conread position: 321-585
Cow position: chr24:5849522-5849233 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 324-517
Cow position: chr24:18243587-18243391 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 97, 69

Conread position: 324-524
Cow position: chr24:16895251-16895056 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 12, 63

Conread position: 324-541
Cow position: chr24:39681735-39681951 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 324-595
Cow position: chr24:16399552-16399287 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 73, 104

Conread position: 325-589
Cow position: chr24:17981071-17981332 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 326-593
Cow position: chr24:40809476-40809215 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 26

Conread position: 327-440
Cow position: chr24:39259045-39259155 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 25

Conread position: 327-454
Cow position: chr24:42419105-42418980 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 13

Conread position: 327-503
Cow position: chr24:36713637-36713816 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 69, 54

Conread position: 327-519
Cow position: chr24:27683555-27683379 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 121, 13

Conread position: 327-534
Cow position: chr24:32086041-32085838 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 168
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 70, 10

Conread position: 327-538
Cow position: chr24:12263829-12263617 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 69, 151

Conread position: 327-538
Cow position: chr24:27900612-27900824 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 68, 14

Conread position: 327-541
Cow position: chr24:14617538-14617759 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 74, 91

Conread position: 327-549
Cow position: chr24:40091691-40091474 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 146, 59

Conread position: 327-550
Cow position: chr24:19611893-19612115 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 327-555
Cow position: chr24:11201761-11201534 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 89

Conread position: 327-573
Cow position: chr24:39742711-39742946 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 111, 35

Conread position: 327-584
Cow position: chr24:30860520-30860776 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 71

Conread position: 327-585
Cow position: chr24:31258453-31258197 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 0

Conread position: 327-587
Cow position: chr24:14337616-14337873 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 76, 25

Conread position: 327-589
Cow position: chr24:24311388-24311649 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 158

Conread position: 327-589
Cow position: chr24:28349463-28349730 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 114, 41

Conread position: 327-589
Cow position: chr24:31776623-31776873 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 327-589
Cow position: chr24:35569067-35569319 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 99

Conread position: 327-589
Cow position: chr24:42943227-42942972 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 111, 25

Conread position: 327-590
Cow position: chr24:36801263-36801523 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 30

Conread position: 327-593
Cow position: chr24:26455723-26455991 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 83

Conread position: 327-595
Cow position: chr24:31378645-31378902 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 25

Conread position: 327-595
Cow position: chr24:32158392-32158121 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 327-595
Cow position: chr24:32758876-32758608 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 120

Conread position: 327-596
Cow position: chr24:27633290-27633553 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 114

Conread position: 327-597
Cow position: chr24:25677921-25678178 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 155, 62

Conread position: 328-510
Cow position: chr24:34008692-34008503 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 328-514
Cow position: chr24:32894284-32894464 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 32

Conread position: 328-514
Cow position: chr24:36008370-36008558 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 82, 51

Conread position: 328-515
Cow position: chr24:16895552-16895362 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 124, 39

Conread position: 328-515
Cow position: chr24:20943051-20943236 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 179, 79

Conread position: 328-515
Cow position: chr24:24457361-24457176 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 123, 29

Conread position: 328-520
Cow position: chr24:32054544-32054742 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 59

Conread position: 328-524
Cow position: chr24:32204910-32204712 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 119, 65

Conread position: 328-524
Cow position: chr24:43364244-43364441 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 133, 32

Conread position: 328-531
Cow position: chr24:31159501-31159705 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 76

Conread position: 328-531
Cow position: chr24:35150406-35150608 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 81, 61

Conread position: 328-531
Cow position: chr24:39523563-39523359 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 118, 58

Conread position: 328-589
Cow position: chr24:15508654-15508403 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 39

Conread position: 328-589
Cow position: chr24:30544975-30544724 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 154, 62

Conread position: 328-589
Cow position: chr24:34369123-34368860 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 69

Conread position: 329-495
Cow position: chr24:14103474-14103638 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 329-541
Cow position: chr24:23824539-23824322 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 65, 0

Conread position: 329-550
Cow position: chr24:14746519-14746756 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 195

Conread position: 329-595
Cow position: chr24:1438388-1438116 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 73, 215

Conread position: 330-589
Cow position: chr24:2970720-2970460 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 119, 76

Conread position: 330-589
Cow position: chr24:16055613-16055364 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 112, 65

Conread position: 331-531
Cow position: chr24:31324169-31324373 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 54

Conread position: 331-550
Cow position: chr24:35529807-35530010 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 331-589
Cow position: chr24:2143635-2143896 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 20, 82

Conread position: 331-596
Cow position: chr24:6507881-6507615 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 38

Conread position: 332-541
Cow position: chr24:25112091-25112297 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 109, 27

Conread position: 333-536
Cow position: chr24:27418212-27418008 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 145

Conread position: 335-588
Cow position: chr24:35827625-35827889 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 194

Conread position: 336-544
Cow position: chr24:41963208-41962997 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 0

Conread position: 337-485
Cow position: chr24:23685177-23685023 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 337-492
Cow position: chr24:41052841-41052999 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 337-510
Cow position: chr24:29679416-29679243 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 63

Conread position: 337-515
Cow position: chr24:19736442-19736260 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 65

Conread position: 337-521
Cow position: chr24:19769381-19769570 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 112, 54

Conread position: 337-589
Cow position: chr24:39350325-39350078 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 191

Conread position: 342-520
Cow position: chr24:24495937-24495762 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 49, 10

Conread position: 345-539
Cow position: chr24:12452683-12452881 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 145

Conread position: 353-519
Cow position: chr24:18567608-18567441 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 41, 65

Conread position: 353-589
Cow position: chr24:19754483-19754725 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 164

Conread position: 355-584
Cow position: chr24:25164944-25165177 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 97, 52

Conread position: 363-587
Cow position: chr24:42681655-42681871 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 132, 0

Conread position: 374-571
Cow position: chr24:10546000-10546199 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 374-592
Cow position: chr24:1271954-1271729 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 20, 35

Conread position: 385-507
Cow position: chr24:30427874-30427753 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 393-595
Cow position: chr24:6427652-6427857 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 177

Conread position: 393-595
Cow position: chr24:28279572-28279777 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 46, 174

Conread position: 400-555
Cow position: chr24:23176743-23176586 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 103

Conread position: 405-589
Cow position: chr24:21041977-21041797 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 140, 94

Conread position: 421-589
Cow position: chr24:38291836-38292002 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 125

Conread position: 422-587
Cow position: chr24:16481326-16481169 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 423-587
Cow position: chr24:36497754-36497591 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 423-589
Cow position: chr24:42916400-42916241 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 427-536
Cow position: chr24:44187522-44187635 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 427-586
Cow position: chr24:44929334-44929493 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 428-581
Cow position: chr24:10837877-10838024 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 428-589
Cow position: chr24:41482981-41483139 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 30

Conread position: 437-585
Cow position: chr24:32059462-32059315 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 88

Conread position: 442-589
Cow position: chr24:41332583-41332436 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 457-588
Cow position: chr24:31338865-31338996 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 97

Show alignments to all cow chromosomes.