Cow genome map

Conread name: Emb1-C0005216_G08

Conread position: 302-590
Cow position: chr26:8651703-8651422 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 16

Conread position: 316-535
Cow position: chr26:23272697-23272908 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 100

Conread position: 320-595
Cow position: chr26:17204223-17203948 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 70, 32

Conread position: 321-589
Cow position: chr26:6470354-6470087 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 152, 80

Conread position: 323-586
Cow position: chr26:32215363-32215631 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 134, 207

Conread position: 324-589
Cow position: chr26:9632450-9632176 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 79, 243

Conread position: 327-470
Cow position: chr26:33745842-33745986 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 108

Conread position: 327-540
Cow position: chr26:22975199-22975405 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 135, 25

Conread position: 327-549
Cow position: chr26:29353582-29353360 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 125, 63

Conread position: 327-550
Cow position: chr26:30605436-30605217 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 76, 127

Conread position: 327-555
Cow position: chr26:7103107-7102893 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 177
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 214, 62

Conread position: 327-555
Cow position: chr26:17155399-17155175 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 327-570
Cow position: chr26:3019493-3019248 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 327-587
Cow position: chr26:783006-782747 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 70, 24

Conread position: 327-587
Cow position: chr26:18719179-18719440 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 327-588
Cow position: chr26:10292513-10292781 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 101, 231

Conread position: 327-589
Cow position: chr26:2196667-2196403 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 18, 43

Conread position: 327-589
Cow position: chr26:9666485-9666228 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 110

Conread position: 327-589
Cow position: chr26:16604209-16604480 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 28

Conread position: 327-589
Cow position: chr26:29244324-29244583 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 13

Conread position: 327-595
Cow position: chr26:14924408-14924677 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 26

Conread position: 327-595
Cow position: chr26:21578154-21577905 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 262, 12

Conread position: 327-595
Cow position: chr26:27585698-27585967 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 103

Conread position: 327-596
Cow position: chr26:17289130-17289384 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 67, 54

Conread position: 327-614
Cow position: chr26:19110835-19111126 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 83

Conread position: 328-509
Cow position: chr26:2609875-2609697 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 122, 65

Conread position: 328-510
Cow position: chr26:8642870-8643052 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 126

Conread position: 328-513
Cow position: chr26:4807487-4807666 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 154, 51

Conread position: 328-515
Cow position: chr26:5246554-5246362 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 52, 66

Conread position: 328-522
Cow position: chr26:22152152-22152349 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 40

Conread position: 328-524
Cow position: chr26:6475505-6475305 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 25, 148

Conread position: 328-524
Cow position: chr26:19774376-19774175 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 58

Conread position: 328-530
Cow position: chr26:8811055-8811255 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 58

Conread position: 328-531
Cow position: chr26:6864941-6865155 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 194

Conread position: 328-547
Cow position: chr26:11263567-11263785 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 119, 60

Conread position: 328-586
Cow position: chr26:33194571-33194812 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 12, 0

Conread position: 328-589
Cow position: chr26:15211727-15211998 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 87, 41

Conread position: 329-526
Cow position: chr26:33227736-33227917 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 329-532
Cow position: chr26:32776581-32776380 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 139
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 175, 56

Conread position: 329-589
Cow position: chr26:32865963-32865703 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 73, 42

Conread position: 329-595
Cow position: chr26:12216796-12217040 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 260, 58

Conread position: 330-454
Cow position: chr26:6299064-6299189 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 330-515
Cow position: chr26:21243029-21243210 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 152, 61

Conread position: 330-524
Cow position: chr26:14905884-14905684 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 36, 41

Conread position: 330-532
Cow position: chr26:32834646-32834447 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 122, 39

Conread position: 330-533
Cow position: chr26:4747928-4747728 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 330-538
Cow position: chr26:12125117-12124916 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 204, 70

Conread position: 330-595
Cow position: chr26:12519945-12520223 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 0

Conread position: 331-540
Cow position: chr26:11134767-11134551 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 99

Conread position: 331-589
Cow position: chr26:2769912-2769654 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 92

Conread position: 331-595
Cow position: chr26:798370-798094 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 118, 96

Conread position: 332-510
Cow position: chr26:8700118-8699936 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 120, 54

Conread position: 332-549
Cow position: chr26:34169257-34169038 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 102, 91

Conread position: 334-613
Cow position: chr26:3756164-3756427 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 337-588
Cow position: chr26:7955788-7956035 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 9

Conread position: 337-588
Cow position: chr26:12669130-12669385 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 183

Conread position: 337-589
Cow position: chr26:21859755-21860009 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 203

Conread position: 337-595
Cow position: chr26:9064275-9064529 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 78

Conread position: 338-531
Cow position: chr26:34521503-34521702 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 59

Conread position: 340-519
Cow position: chr26:20129735-20129561 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 96, 0

Conread position: 341-530
Cow position: chr26:2408785-2408601 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 0

Conread position: 341-595
Cow position: chr26:11568033-11567783 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 177

Conread position: 343-499
Cow position: chr26:198423-198578 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 345-589
Cow position: chr26:15564631-15564383 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 36

Conread position: 347-576
Cow position: chr26:19903323-19903555 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 49, 156

Conread position: 355-545
Cow position: chr26:34119086-34118890 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 355-589
Cow position: chr26:9102164-9101924 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 162

Conread position: 360-586
Cow position: chr26:24183090-24182868 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 178
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 23, 142

Conread position: 360-589
Cow position: chr26:28334880-28334647 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 28, 48

Conread position: 369-591
Cow position: chr26:32854318-32854103 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 372-555
Cow position: chr26:5985845-5985666 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 106, 79

Conread position: 372-588
Cow position: chr26:14080672-14080890 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 179
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 13, 112

Conread position: 382-595
Cow position: chr26:31466659-31466877 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 32

Conread position: 388-589
Cow position: chr26:10523464-10523265 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 80

Conread position: 391-550
Cow position: chr26:19935370-19935212 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 133
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 43, 0

Conread position: 392-526
Cow position: chr26:5783408-5783545 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 17

Conread position: 392-595
Cow position: chr26:28790132-28789932 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 198, 160

Conread position: 399-513
Cow position: chr26:8823713-8823827 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 401-522
Cow position: chr26:21057438-21057316 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 401-587
Cow position: chr26:12580013-12579827 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 30

Conread position: 407-595
Cow position: chr26:10137738-10137547 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 46, 110

Conread position: 416-555
Cow position: chr26:19768795-19768651 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 417-586
Cow position: chr26:7387779-7387947 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 36, 139

Conread position: 417-595
Cow position: chr26:7961952-7962129 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 65, 95

Conread position: 421-550
Cow position: chr26:7054013-7054140 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 422-588
Cow position: chr26:3186564-3186735 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 422-589
Cow position: chr26:12652222-12652056 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 115, 9

Conread position: 444-592
Cow position: chr26:16851180-16851320 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 444-595
Cow position: chr26:6299467-6299614 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 146, 23

Conread position: 445-573
Cow position: chr26:19332959-19332834 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 445-586
Cow position: chr26:2246045-2246181 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 446-583
Cow position: chr26:10292821-10292956 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 111, 39

Conread position: 448-555
Cow position: chr26:25488591-25488482 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 450-583
Cow position: chr26:30385825-30385961 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 99, 56

Conread position: 463-595
Cow position: chr26:25241689-25241822 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 125, 0

Show alignments to all cow chromosomes.