Cow genome map

Conread name: Emb1-C0005216_G08

Conread position: 314-544
Cow position: chr27:9562278-9562504 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 23, 40

Conread position: 314-555
Cow position: chr27:13977480-13977727 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 40, 15

Conread position: 323-587
Cow position: chr27:24341964-24341689 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 14

Conread position: 323-588
Cow position: chr27:2847905-2847640 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 80, 14

Conread position: 324-588
Cow position: chr27:25982675-25982932 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 13

Conread position: 324-618
Cow position: chr27:26441009-26441293 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 63

Conread position: 325-514
Cow position: chr27:4007208-4007397 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 130, 35

Conread position: 325-520
Cow position: chr27:11356487-11356684 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 325-520
Cow position: chr27:19546460-19546658 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 325-584
Cow position: chr27:783755-783496 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 156

Conread position: 325-595
Cow position: chr27:20748961-20749243 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 65, 16

Conread position: 325-596
Cow position: chr27:26492650-26492917 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 70, 79

Conread position: 326-550
Cow position: chr27:30811501-30811276 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 26

Conread position: 326-585
Cow position: chr27:26161552-26161293 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 104, 23

Conread position: 327-499
Cow position: chr27:12424868-12425042 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 67, 106

Conread position: 327-511
Cow position: chr27:23600315-23600135 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 80, 41

Conread position: 327-512
Cow position: chr27:19577723-19577536 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 125

Conread position: 327-517
Cow position: chr27:23959341-23959160 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 327-520
Cow position: chr27:4664530-4664332 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 327-521
Cow position: chr27:2354725-2354917 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 21

Conread position: 327-529
Cow position: chr27:465006-464816 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 327-540
Cow position: chr27:11416497-11416285 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 72

Conread position: 327-540
Cow position: chr27:27053345-27053129 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 114, 134

Conread position: 327-553
Cow position: chr27:12913777-12914008 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 137, 66

Conread position: 327-553
Cow position: chr27:27234071-27233840 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 70, 138

Conread position: 327-554
Cow position: chr27:21138872-21138650 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 29, 86

Conread position: 327-588
Cow position: chr27:6454260-6453994 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 65, 191

Conread position: 327-589
Cow position: chr27:8430389-8430654 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 68, 80

Conread position: 327-589
Cow position: chr27:19083665-19083932 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 327-589
Cow position: chr27:23662559-23662808 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 327-592
Cow position: chr27:14937376-14937647 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 208

Conread position: 327-595
Cow position: chr27:490945-490682 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 48

Conread position: 327-595
Cow position: chr27:29038891-29039162 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 122, 13

Conread position: 327-595
Cow position: chr27:30365361-30365096 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 111, 24

Conread position: 328-504
Cow position: chr27:10979911-10979732 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 121, 48

Conread position: 328-509
Cow position: chr27:23860217-23860029 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 180

Conread position: 328-509
Cow position: chr27:30868692-30868877 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 121, 58

Conread position: 328-510
Cow position: chr27:18593315-18593135 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 154, 15

Conread position: 328-510
Cow position: chr27:31148809-31148623 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 119, 62

Conread position: 328-515
Cow position: chr27:22559776-22559966 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 328-524
Cow position: chr27:12246705-12246503 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 31

Conread position: 328-530
Cow position: chr27:15215281-15215072 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 99

Conread position: 328-531
Cow position: chr27:27038792-27038995 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 34

Conread position: 328-547
Cow position: chr27:19660983-19660758 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 189

Conread position: 328-564
Cow position: chr27:8273062-8272820 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 207

Conread position: 328-574
Cow position: chr27:29380904-29380653 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 225

Conread position: 328-589
Cow position: chr27:13005888-13005634 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 66, 51

Conread position: 328-589
Cow position: chr27:22108163-22108421 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 151, 14

Conread position: 328-595
Cow position: chr27:22225547-22225809 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 124, 51

Conread position: 328-595
Cow position: chr27:25998751-25998484 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 51

Conread position: 328-595
Cow position: chr27:29504598-29504871 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 181
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 216

Conread position: 329-502
Cow position: chr27:4156049-4155867 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 329-541
Cow position: chr27:19647892-19648110 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 108

Conread position: 329-587
Cow position: chr27:24509864-24509612 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 120, 55

Conread position: 329-589
Cow position: chr27:19543861-19544135 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 23, 197

Conread position: 329-593
Cow position: chr27:20765915-20766173 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 71, 23

Conread position: 329-595
Cow position: chr27:12244078-12244348 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 120, 78

Conread position: 329-614
Cow position: chr27:15319496-15319226 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 120, 14

Conread position: 330-517
Cow position: chr27:25471185-25471005 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 140, 22

Conread position: 330-530
Cow position: chr27:26226244-26226444 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 54

Conread position: 330-530
Cow position: chr27:29019706-29019890 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 330-550
Cow position: chr27:6884067-6883857 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 13

Conread position: 330-584
Cow position: chr27:6160028-6159777 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 117, 170

Conread position: 331-555
Cow position: chr27:24224847-24225080 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 75, 66

Conread position: 331-587
Cow position: chr27:8048697-8048944 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 60, 0

Conread position: 331-589
Cow position: chr27:16493618-16493371 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 21, 0

Conread position: 331-589
Cow position: chr27:19601422-19601160 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 100, 26

Conread position: 332-535
Cow position: chr27:30560958-30560764 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 332-587
Cow position: chr27:21393457-21393725 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 37

Conread position: 335-530
Cow position: chr27:27841864-27842063 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 74

Conread position: 336-517
Cow position: chr27:19869869-19869686 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 61, 0

Conread position: 337-510
Cow position: chr27:17646128-17646306 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 70

Conread position: 337-593
Cow position: chr27:1536678-1536947 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 339-569
Cow position: chr27:21681289-21681520 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 20

Conread position: 343-587
Cow position: chr27:10992390-10992142 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 52, 37

Conread position: 356-595
Cow position: chr27:12247698-12247465 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 31

Conread position: 363-593
Cow position: chr27:13970374-13970598 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 137

Conread position: 374-581
Cow position: chr27:30790463-30790266 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 21, 36

Conread position: 374-595
Cow position: chr27:25970403-25970185 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 21, 11

Conread position: 377-589
Cow position: chr27:21578576-21578790 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 73, 18

Conread position: 385-521
Cow position: chr27:18944033-18944173 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 386-589
Cow position: chr27:13958352-13958558 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 66, 189

Conread position: 391-582
Cow position: chr27:21970900-21971089 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 401-553
Cow position: chr27:3688234-3688383 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 79

Conread position: 402-589
Cow position: chr27:10119103-10119298 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 74, 0

Conread position: 411-589
Cow position: chr27:25880068-25879887 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 411-593
Cow position: chr27:24333655-24333831 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 28

Conread position: 416-595
Cow position: chr27:16525883-16526063 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 173, 0

Conread position: 419-589
Cow position: chr27:11746547-11746373 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 429-550
Cow position: chr27:18219342-18219221 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 105
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 430-593
Cow position: chr27:6347807-6347971 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 98, 154

Conread position: 438-589
Cow position: chr27:2403343-2403492 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 135, 0

Conread position: 439-586
Cow position: chr27:17875207-17875354 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 443-555
Cow position: chr27:21991461-21991350 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 443-589
Cow position: chr27:18028542-18028397 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 20, 38

Conread position: 445-589
Cow position: chr27:29339667-29339524 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 119

Conread position: 445-595
Cow position: chr27:1675078-1674927 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 48

Conread position: 446-588
Cow position: chr27:1899644-1899785 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 449-587
Cow position: chr27:9692095-9692230 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 450-595
Cow position: chr27:31339830-31339975 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 140, 20

Conread position: 457-589
Cow position: chr27:7983187-7983318 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 457-595
Cow position: chr27:1085035-1085169 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 113, 12

Show alignments to all cow chromosomes.