Cow genome map

Conread name: Emb1-C0005216_G08

Conread position: 302-517
Cow position: chr28:4406138-4406349 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 171
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 32, 62

Conread position: 309-515
Cow position: chr28:20412518-20412722 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 83

Conread position: 316-512
Cow position: chr28:2517912-2517711 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 152

Conread position: 316-589
Cow position: chr28:1202337-1202070 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 13

Conread position: 316-591
Cow position: chr28:11200966-11200711 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 240, 26

Conread position: 318-586
Cow position: chr28:9176852-9176586 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 178

Conread position: 320-510
Cow position: chr28:10035304-10035484 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 46

Conread position: 320-589
Cow position: chr28:4763780-4764053 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 230

Conread position: 321-493
Cow position: chr28:13936302-13936478 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 321-589
Cow position: chr28:32366330-32366076 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 158, 19

Conread position: 324-557
Cow position: chr28:11007100-11007345 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 324-589
Cow position: chr28:11181257-11180989 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 14, 235

Conread position: 324-595
Cow position: chr28:19253388-19253661 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 185

Conread position: 324-595
Cow position: chr28:33285203-33284926 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 13

Conread position: 324-595
Cow position: chr28:34199198-34198926 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 106, 78

Conread position: 325-486
Cow position: chr28:10642107-10641960 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 325-509
Cow position: chr28:20265305-20265498 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 325-530
Cow position: chr28:27659769-27659573 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 325-617
Cow position: chr28:12999004-12999299 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 9, 37

Conread position: 326-541
Cow position: chr28:5406466-5406679 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 116

Conread position: 327-470
Cow position: chr28:12942289-12942435 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 327-497
Cow position: chr28:16686940-16687111 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 72, 36

Conread position: 327-512
Cow position: chr28:21570102-21570290 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 74, 25

Conread position: 327-516
Cow position: chr28:2814595-2814405 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 155, 0

Conread position: 327-517
Cow position: chr28:13693664-13693854 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 127

Conread position: 327-520
Cow position: chr28:32300447-32300249 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 137

Conread position: 327-531
Cow position: chr28:30865332-30865536 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 125, 20

Conread position: 327-535
Cow position: chr28:13255964-13255752 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 14, 104

Conread position: 327-550
Cow position: chr28:21873683-21873897 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 125, 48

Conread position: 327-569
Cow position: chr28:23621457-23621687 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 115, 82

Conread position: 327-573
Cow position: chr28:3769752-3769510 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 59, 24

Conread position: 327-585
Cow position: chr28:11500974-11500709 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 120, 63

Conread position: 327-589
Cow position: chr28:5475118-5474856 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 9, 20

Conread position: 327-589
Cow position: chr28:6643371-6643104 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 121, 59

Conread position: 327-589
Cow position: chr28:9822065-9821800 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 7, 100

Conread position: 327-589
Cow position: chr28:25825956-25825689 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 68, 178

Conread position: 328-509
Cow position: chr28:21363659-21363838 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 154, 58

Conread position: 328-510
Cow position: chr28:20313189-20313376 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 24

Conread position: 328-529
Cow position: chr28:30746814-30746612 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 121, 40

Conread position: 328-531
Cow position: chr28:4881323-4881121 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 121, 51

Conread position: 328-548
Cow position: chr28:9285460-9285244 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 124

Conread position: 328-573
Cow position: chr28:21598340-21598091 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 124, 58

Conread position: 328-586
Cow position: chr28:13865756-13866015 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 65

Conread position: 328-588
Cow position: chr28:9237228-9237489 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 74

Conread position: 328-589
Cow position: chr28:7540246-7539982 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 201

Conread position: 328-592
Cow position: chr28:23410411-23410136 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 124, 70

Conread position: 328-595
Cow position: chr28:23007820-23007540 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 189

Conread position: 328-596
Cow position: chr28:7865238-7865508 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 181
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 122, 202

Conread position: 329-473
Cow position: chr28:18462695-18462552 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 17

Conread position: 329-525
Cow position: chr28:2091087-2091277 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 193, 61

Conread position: 329-555
Cow position: chr28:32845018-32844791 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 61, 56

Conread position: 329-556
Cow position: chr28:19133710-19133918 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 329-587
Cow position: chr28:14508456-14508194 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 31

Conread position: 329-589
Cow position: chr28:23668870-23668609 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 66, 92

Conread position: 329-592
Cow position: chr28:18934367-18934633 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 65, 38

Conread position: 329-593
Cow position: chr28:3914626-3914904 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 329-594
Cow position: chr28:20963617-20963348 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 71, 56

Conread position: 330-520
Cow position: chr28:18139537-18139355 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 119, 13

Conread position: 330-541
Cow position: chr28:17601958-17601746 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 37

Conread position: 330-588
Cow position: chr28:15677806-15678062 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 119, 16

Conread position: 330-589
Cow position: chr28:4274925-4274669 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 40

Conread position: 330-594
Cow position: chr28:25563997-25564265 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 206

Conread position: 331-498
Cow position: chr28:15577343-15577177 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 66, 79

Conread position: 331-546
Cow position: chr28:25249270-25249487 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 56

Conread position: 331-571
Cow position: chr28:29455740-29455512 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 331-588
Cow position: chr28:33485551-33485822 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 123, 209

Conread position: 331-589
Cow position: chr28:24343287-24343548 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 174
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 151, 66

Conread position: 333-449
Cow position: chr28:15498290-15498173 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 333-572
Cow position: chr28:25340201-25340429 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 108, 57

Conread position: 333-595
Cow position: chr28:15082005-15081743 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 70, 223

Conread position: 334-580
Cow position: chr28:12046997-12046743 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 69, 0

Conread position: 338-511
Cow position: chr28:4098752-4098929 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 111, 55

Conread position: 345-589
Cow position: chr28:31166055-31165806 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 362-580
Cow position: chr28:20275074-20275295 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 120

Conread position: 369-589
Cow position: chr28:6993656-6993441 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 20

Conread position: 372-594
Cow position: chr28:7156791-7157017 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 24, 145

Conread position: 374-571
Cow position: chr28:8335919-8336121 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 22, 10

Conread position: 380-585
Cow position: chr28:7805459-7805254 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 23, 41

Conread position: 380-595
Cow position: chr28:9294530-9294309 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 70, 0

Conread position: 381-589
Cow position: chr28:17362636-17362425 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 385-589
Cow position: chr28:8789125-8789328 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 32

Conread position: 388-589
Cow position: chr28:1608160-1608366 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 171
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 9

Conread position: 389-587
Cow position: chr28:24500176-24500381 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 96

Conread position: 392-530
Cow position: chr28:11355693-11355557 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 394-589
Cow position: chr28:31373086-31373281 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 128

Conread position: 399-548
Cow position: chr28:33324060-33324207 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 402-589
Cow position: chr28:23703392-23703582 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 113

Conread position: 407-595
Cow position: chr28:28513480-28513666 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 27

Conread position: 416-595
Cow position: chr28:3823136-3822958 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 13

Conread position: 429-567
Cow position: chr28:15406073-15406213 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 8, 83

Conread position: 441-596
Cow position: chr28:22421957-22421808 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 147, 111

Conread position: 446-594
Cow position: chr28:17625139-17624989 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 446-596
Cow position: chr28:20308126-20308279 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 77, 101

Conread position: 450-589
Cow position: chr28:23138007-23137860 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 461-555
Cow position: chr28:26900777-26900683 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 476-584
Cow position: chr28:22498437-22498545 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.