Cow genome map

Conread name: Emb1-C0005216_G08

Conread position: 302-541
Cow position: chr29:9938207-9937960 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 22, 207

Conread position: 314-505
Cow position: chr29:35000283-35000089 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 45

Conread position: 315-512
Cow position: chr29:24604245-24604043 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 46

Conread position: 320-572
Cow position: chr29:29302753-29302505 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 33

Conread position: 321-596
Cow position: chr29:17154667-17154958 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 203

Conread position: 323-587
Cow position: chr29:7663369-7663105 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 62, 27

Conread position: 324-555
Cow position: chr29:19907258-19907489 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 110, 153

Conread position: 325-503
Cow position: chr29:12901202-12901034 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 68, 0

Conread position: 325-589
Cow position: chr29:11366140-11366403 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 39, 32

Conread position: 327-506
Cow position: chr29:32645378-32645547 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 327-514
Cow position: chr29:290071-289878 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 108, 53

Conread position: 327-526
Cow position: chr29:10187961-10188166 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 80, 14

Conread position: 327-546
Cow position: chr29:650185-650401 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 74, 51

Conread position: 327-550
Cow position: chr29:18695161-18695381 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 75, 29

Conread position: 327-550
Cow position: chr29:25924061-25923831 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 187

Conread position: 327-555
Cow position: chr29:13554041-13554273 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 327-574
Cow position: chr29:25426751-25426504 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 121, 175

Conread position: 327-584
Cow position: chr29:19508858-19509105 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 70, 0

Conread position: 327-585
Cow position: chr29:39023438-39023172 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 67, 25

Conread position: 327-588
Cow position: chr29:1340688-1340951 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 36

Conread position: 327-588
Cow position: chr29:18540962-18541215 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 69, 138

Conread position: 327-588
Cow position: chr29:18963641-18963903 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 25

Conread position: 327-589
Cow position: chr29:7054326-7054580 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 25

Conread position: 327-589
Cow position: chr29:13634395-13634131 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 123, 201

Conread position: 327-592
Cow position: chr29:26129408-26129662 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 327-594
Cow position: chr29:4367628-4367898 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 222

Conread position: 327-595
Cow position: chr29:942534-942797 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 90

Conread position: 327-601
Cow position: chr29:14758956-14758682 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 261

Conread position: 328-452
Cow position: chr29:45384032-45384155 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 328-509
Cow position: chr29:23389649-23389466 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 151, 0

Conread position: 328-515
Cow position: chr29:4520242-4520432 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 71, 186

Conread position: 328-515
Cow position: chr29:39567594-39567778 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 154, 72

Conread position: 328-515
Cow position: chr29:40583700-40583882 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 72

Conread position: 328-520
Cow position: chr29:24952595-24952786 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 123, 63

Conread position: 328-521
Cow position: chr29:11398017-11397824 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 51

Conread position: 328-530
Cow position: chr29:13028344-13028549 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 188

Conread position: 328-530
Cow position: chr29:38580884-38581088 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 129, 199

Conread position: 328-532
Cow position: chr29:19897514-19897721 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 69, 151

Conread position: 328-539
Cow position: chr29:5046559-5046773 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 124, 58

Conread position: 328-547
Cow position: chr29:32799801-32799584 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 130, 95

Conread position: 328-589
Cow position: chr29:18021773-18021513 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 28, 12

Conread position: 328-593
Cow position: chr29:12626072-12625804 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 85, 58

Conread position: 328-594
Cow position: chr29:6337568-6337845 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 119, 79

Conread position: 328-595
Cow position: chr29:8862571-8862303 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 71, 97

Conread position: 328-595
Cow position: chr29:35442554-35442285 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 74, 48

Conread position: 329-545
Cow position: chr29:16055222-16055006 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 329-586
Cow position: chr29:4444622-4444885 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 329-589
Cow position: chr29:37961069-37960808 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 52, 36

Conread position: 329-607
Cow position: chr29:32655525-32655234 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 62, 139

Conread position: 330-501
Cow position: chr29:23233359-23233529 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 123, 0

Conread position: 330-505
Cow position: chr29:41530756-41530936 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 122, 0

Conread position: 330-530
Cow position: chr29:12451285-12451485 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 48, 148

Conread position: 330-587
Cow position: chr29:10153879-10153625 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 66

Conread position: 330-595
Cow position: chr29:13127213-13126949 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 116, 63

Conread position: 331-521
Cow position: chr29:1325350-1325541 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 148, 181

Conread position: 331-589
Cow position: chr29:18072845-18073107 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 38

Conread position: 331-589
Cow position: chr29:26317764-26318022 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 107, 25

Conread position: 331-589
Cow position: chr29:26985138-26985397 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 102, 36

Conread position: 331-589
Cow position: chr29:29559808-29559552 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 29

Conread position: 331-595
Cow position: chr29:7407978-7407728 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 259, 56

Conread position: 331-595
Cow position: chr29:21265672-21265937 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 116, 28

Conread position: 332-506
Cow position: chr29:26986843-26987016 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 116, 35

Conread position: 332-588
Cow position: chr29:11677547-11677293 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 170
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 98, 66

Conread position: 332-589
Cow position: chr29:2274921-2274675 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 81

Conread position: 332-589
Cow position: chr29:34736557-34736318 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 332-595
Cow position: chr29:11071787-11071510 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 241

Conread position: 333-587
Cow position: chr29:6772044-6772297 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 70

Conread position: 333-589
Cow position: chr29:26298888-26299139 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 149, 25

Conread position: 334-588
Cow position: chr29:34699916-34699677 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 334-589
Cow position: chr29:11787709-11787955 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 72, 186

Conread position: 335-515
Cow position: chr29:12784042-12783868 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 117, 56

Conread position: 337-567
Cow position: chr29:9512176-9512408 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 23

Conread position: 337-573
Cow position: chr29:356235-356475 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 115, 60

Conread position: 337-589
Cow position: chr29:6207980-6208230 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 148, 90

Conread position: 337-596
Cow position: chr29:11005647-11005912 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 197

Conread position: 337-597
Cow position: chr29:22895637-22895905 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 337-603
Cow position: chr29:12761869-12762139 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 66, 90

Conread position: 342-587
Cow position: chr29:40337608-40337374 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 110, 48

Conread position: 344-595
Cow position: chr29:5616945-5616691 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 106, 18

Conread position: 347-555
Cow position: chr29:41083077-41083284 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 92, 50

Conread position: 347-595
Cow position: chr29:5976860-5976614 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 60, 70

Conread position: 348-589
Cow position: chr29:21675321-21675560 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 99, 66

Conread position: 355-530
Cow position: chr29:38759086-38758914 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 357-547
Cow position: chr29:17543379-17543573 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 40, 12

Conread position: 362-589
Cow position: chr29:4691452-4691219 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 160

Conread position: 372-519
Cow position: chr29:34785261-34785113 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 374-589
Cow position: chr29:11766680-11766884 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 0

Conread position: 391-509
Cow position: chr29:27285745-27285861 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 393-519
Cow position: chr29:32644881-32645011 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 397-596
Cow position: chr29:19734643-19734839 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 5, 52

Conread position: 405-553
Cow position: chr29:18067889-18068038 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 124
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 117

Conread position: 416-595
Cow position: chr29:19607531-19607348 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 9

Conread position: 418-589
Cow position: chr29:27688744-27688573 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 142

Conread position: 423-555
Cow position: chr29:24323655-24323786 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 431-588
Cow position: chr29:7637547-7637392 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 125, 0

Conread position: 431-589
Cow position: chr29:9662028-9662185 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 431-589
Cow position: chr29:32080556-32080716 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 438-593
Cow position: chr29:23742243-23742091 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 151, 62

Conread position: 444-595
Cow position: chr29:7129523-7129373 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 146, 113

Conread position: 448-595
Cow position: chr29:8794379-8794530 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 457-589
Cow position: chr29:19528-19660 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.