Cow genome map


           Conread name:
           Emb1-C0005216_J22
        

               Conread position:
               1-176
               

               Cow position:
               chr19:55559020-55558841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               2-147
               

               Cow position:
               chr19:27838269-27838418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               3-158
               

               Cow position:
               chr19:6476503-6476665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               3-164
               

               Cow position:
               chr19:13227302-13227466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               15-149
               

               Cow position:
               chr19:30242787-30242651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               320-513
               

               Cow position:
               chr19:27838222-27838418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 30
               

               Conread position:
               320-524
               

               Cow position:
               chr19:6476456-6476665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               353-530
               

               Cow position:
               chr19:13227286-13227466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               30, 39
               

               Conread position:
               353-542
               

               Cow position:
               chr19:55559034-55558841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               381-515
               

               Cow position:
               chr19:30242787-30242651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               31, 0
               
Show alignments to all cow chromosomes.