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Cow genome map

           
Conread name:
           
Emb1-C0005217_D13
        

               
Conread position:
               
2-210
               

               
Cow position:
               
chr13:36771355-36771570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr13:18995191-18994923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
27, 120
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr13:1568988-1568725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr13:1147092-1147362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr13:13533605-13533875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 71
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr13:40491278-40491004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr13:42200684-42200407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
27, 56
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr13:20784659-20784380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 203
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr13:37592878-37593161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 251
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr13:20473617-20473892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
30, 195
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr13:41806840-41806558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 223
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr13:9800576-9800301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr13:42672357-42672650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr13:14576271-14575994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr13:20879762-20880046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr13:25817593-25817309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:13089092-13088811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:13320859-13320578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:17158810-17159103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:20579971-20579696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:27550805-27550513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:45023147-45023444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr13:15991166-15991452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr13:7149448-7149725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr13:311495-311201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 106
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr13:20137889-20137586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr13:2822932-2822633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr13:17569035-17569332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 196
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr13:25579123-25579424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
19, 263
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr13:10221016-10220721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr13:5758276-5758573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr13:55162276-55161968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 249
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr13:26847754-26848073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
68, 51
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr13:12045270-12045603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr13:49022803-49023135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 185
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr13:17838013-17837801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr13:19033616-19033334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
78, 45
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr13:6079356-6079621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr13:21283640-21283843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr13:56148585-56148374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
5-210
               

               
Cow position:
               
chr13:2414090-2413880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr13:4664804-4665059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr13:15621876-15621600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 149
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr13:25695709-25695980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr13:6861244-6860958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 167
               

               
Conread position:
               
5-281
               

               
Cow position:
               
chr13:12448933-12449202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
5-281
               

               
Cow position:
               
chr13:12875909-12876197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
26, 151
               

               
Conread position:
               
5-282
               

               
Cow position:
               
chr13:52055532-52055814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr13:9900210-9899924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
5-310
               

               
Cow position:
               
chr13:21127280-21127594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
73, 43
               

               
Conread position:
               
5-333
               

               
Cow position:
               
chr13:21275919-21275589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr13:8667674-8667414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
6-281
               

               
Cow position:
               
chr13:18197546-18197827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 197
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr13:60966827-60966569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
7-282
               

               
Cow position:
               
chr13:48597969-48597687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 215
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr13:32283186-32282890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
7-305
               

               
Cow position:
               
chr13:15192830-15193138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr13:20360336-20359996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
8-210
               

               
Cow position:
               
chr13:26369584-26369373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
8-266
               

               
Cow position:
               
chr13:37521685-37521954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
75, 163
               

               
Conread position:
               
8-284
               

               
Cow position:
               
chr13:62008171-62007886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
21, 198
               

               
Conread position:
               
8-296
               

               
Cow position:
               
chr13:17822892-17823184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
21, 192
               

               
Conread position:
               
9-205
               

               
Cow position:
               
chr13:11643999-11643793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
12-276
               

               
Cow position:
               
chr13:17350408-17350128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 108
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr13:37503529-37503745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
14-282
               

               
Cow position:
               
chr13:8362696-8362970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
18-274
               

               
Cow position:
               
chr13:15195162-15195414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
19-274
               

               
Cow position:
               
chr13:16014859-16014590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
63, 30
               

               
Conread position:
               
19-274
               

               
Cow position:
               
chr13:57475369-57475630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
39, 104
               

               
Conread position:
               
19-282
               

               
Cow position:
               
chr13:12673249-12673507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
65, 7
               

               
Conread position:
               
22-303
               

               
Cow position:
               
chr13:15997079-15996794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
60, 175
               

               
Conread position:
               
26-294
               

               
Cow position:
               
chr13:11260309-11260044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
27-240
               

               
Cow position:
               
chr13:43893284-43893513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
27-276
               

               
Cow position:
               
chr13:34728804-34729055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
34, 133
               

               
Conread position:
               
28-262
               

               
Cow position:
               
chr13:20271190-20271432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
28-263
               

               
Cow position:
               
chr13:26480176-26480405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
28-270
               

               
Cow position:
               
chr13:25926830-25926579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr13:18166770-18166519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr13:46112003-46111754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 29
               

               
Conread position:
               
28-280
               

               
Cow position:
               
chr13:16020889-16020640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
28-280
               

               
Cow position:
               
chr13:24715280-24715030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
28-280
               

               
Cow position:
               
chr13:42114055-42113795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
28-282
               

               
Cow position:
               
chr13:620216-620471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
58, 131
               

               
Conread position:
               
28-282
               

               
Cow position:
               
chr13:11202067-11201817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
28-282
               

               
Cow position:
               
chr13:34873628-34873362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
28-310
               

               
Cow position:
               
chr13:54128557-54128851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
28-329
               

               
Cow position:
               
chr13:60509081-60509398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
29-210
               

               
Cow position:
               
chr13:37381837-37381650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
29-274
               

               
Cow position:
               
chr13:15288887-15289132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
57, 181
               

               
Conread position:
               
29-274
               

               
Cow position:
               
chr13:17611514-17611764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 171
               

               
Conread position:
               
29-296
               

               
Cow position:
               
chr13:37069386-37069109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
20, 249
               

               
Conread position:
               
30-214
               

               
Cow position:
               
chr13:3211586-3211392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
31-274
               

               
Cow position:
               
chr13:19883001-19883247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
55, 117
               

               
Conread position:
               
36-262
               

               
Cow position:
               
chr13:15974641-15974417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
36-262
               

               
Cow position:
               
chr13:18929557-18929324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 93
               

               
Conread position:
               
36-287
               

               
Cow position:
               
chr13:44202028-44201785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
37-281
               

               
Cow position:
               
chr13:584844-585095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
38-221
               

               
Cow position:
               
chr13:19750745-19750553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
20, 104
               

               
Conread position:
               
39-290
               

               
Cow position:
               
chr13:54145450-54145710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
43-283
               

               
Cow position:
               
chr13:59461263-59461024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
15, 154
               

               
Conread position:
               
49-278
               

               
Cow position:
               
chr13:37614186-37614415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
50-258
               

               
Cow position:
               
chr13:16714258-16714463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 10
               

               
Conread position:
               
50-269
               

               
Cow position:
               
chr13:6442094-6442315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
50-270
               

               
Cow position:
               
chr13:6974178-6973953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
32, 121
               

               
Conread position:
               
50-274
               

               
Cow position:
               
chr13:19223664-19223438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 64
               

               
Conread position:
               
50-276
               

               
Cow position:
               
chr13:33054356-33054588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
50-281
               

               
Cow position:
               
chr13:29831414-29831648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
5, 95
               

               
Conread position:
               
50-292
               

               
Cow position:
               
chr13:14063509-14063754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
15, 161
               

               
Conread position:
               
50-304
               

               
Cow position:
               
chr13:20537626-20537370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
130, 37
               

               
Conread position:
               
50-304
               

               
Cow position:
               
chr13:50646618-50646872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
39, 160
               

               
Conread position:
               
50-342
               

               
Cow position:
               
chr13:44003716-44003414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
32, 145
               

               
Conread position:
               
51-278
               

               
Cow position:
               
chr13:12416631-12416855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
163, 10
               

               
Conread position:
               
52-261
               

               
Cow position:
               
chr13:26261773-26261992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
52-274
               

               
Cow position:
               
chr13:52749459-52749676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 157
               

               
Conread position:
               
52-277
               

               
Cow position:
               
chr13:15083674-15083445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 130
               

               
Conread position:
               
52-294
               

               
Cow position:
               
chr13:18970985-18970750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 116
               

               
Conread position:
               
53-274
               

               
Cow position:
               
chr13:11231295-11231510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
176, 51
               

               
Conread position:
               
53-276
               

               
Cow position:
               
chr13:42640396-42640165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 158
               

               
Conread position:
               
53-280
               

               
Cow position:
               
chr13:5910888-5911111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
53-281
               

               
Cow position:
               
chr13:52459470-52459694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
30, 165
               

               
Conread position:
               
53-282
               

               
Cow position:
               
chr13:1462283-1462514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
33, 187
               

               
Conread position:
               
53-292
               

               
Cow position:
               
chr13:21980962-21981203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 109
               

               
Conread position:
               
53-293
               

               
Cow position:
               
chr13:25604607-25604836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 73
               

               
Conread position:
               
54-262
               

               
Cow position:
               
chr13:56958981-56958776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
54-298
               

               
Cow position:
               
chr13:26959792-26960035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
71, 137
               

               
Conread position:
               
54-303
               

               
Cow position:
               
chr13:7076268-7075997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
55-274
               

               
Cow position:
               
chr13:19240433-19240226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
58-282
               

               
Cow position:
               
chr13:16247648-16247422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
79-273
               

               
Cow position:
               
chr13:20509714-20509515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
79-282
               

               
Cow position:
               
chr13:390659-390860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 135
               

               
Conread position:
               
81-294
               

               
Cow position:
               
chr13:29958000-29957774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
82-277
               

               
Cow position:
               
chr13:20370690-20370886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
83-280
               

               
Cow position:
               
chr13:32017536-32017736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
83-282
               

               
Cow position:
               
chr13:6113550-6113753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
84-274
               

               
Cow position:
               
chr13:13478702-13478894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
84-274
               

               
Cow position:
               
chr13:20497621-20497429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
84-278
               

               
Cow position:
               
chr13:1322636-1322443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
130, 25
               

               
Conread position:
               
84-278
               

               
Cow position:
               
chr13:12770218-12770411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
130, 53
               

               
Conread position:
               
84-278
               

               
Cow position:
               
chr13:18299374-18299176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
84-278
               

               
Cow position:
               
chr13:19222647-19222454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
130, 17
               

               
Conread position:
               
84-278
               

               
Cow position:
               
chr13:20893666-20893862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
131, 42
               

               
Conread position:
               
84-278
               

               
Cow position:
               
chr13:52894123-52893930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
84-282
               

               
Cow position:
               
chr13:12946348-12946147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
84-282
               

               
Cow position:
               
chr13:28500089-28500288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
130, 110
               

               
Conread position:
               
84-293
               

               
Cow position:
               
chr13:14116964-14117184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
128, 74
               

               
Conread position:
               
84-296
               

               
Cow position:
               
chr13:9846487-9846700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
130, 169
               

               
Conread position:
               
84-296
               

               
Cow position:
               
chr13:19427610-19427399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
84-296
               

               
Cow position:
               
chr13:21024959-21024746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
84-296
               

               
Cow position:
               
chr13:49392974-49393183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
130, 161
               

               
Conread position:
               
84-299
               

               
Cow position:
               
chr13:10715838-10715624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
125, 188
               

               
Conread position:
               
84-301
               

               
Cow position:
               
chr13:3775706-3775924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
130, 65
               

               
Conread position:
               
85-273
               

               
Cow position:
               
chr13:36877034-36876853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
85-274
               

               
Cow position:
               
chr13:24094343-24094530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
129, 24
               

               
Conread position:
               
85-274
               

               
Cow position:
               
chr13:47243581-47243765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
85-276
               

               
Cow position:
               
chr13:21288111-21288301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 125
               

               
Conread position:
               
85-280
               

               
Cow position:
               
chr13:16096549-16096356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
85-309
               

               
Cow position:
               
chr13:13796837-13797067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
86-206
               

               
Cow position:
               
chr13:17563712-17563593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
86-208
               

               
Cow position:
               
chr13:24110453-24110331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
86-210
               

               
Cow position:
               
chr13:37640562-37640439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
86-238
               

               
Cow position:
               
chr13:17716541-17716695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-240
               

               
Cow position:
               
chr13:6975872-6976022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
86-243
               

               
Cow position:
               
chr13:25547609-25547768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
86-251
               

               
Cow position:
               
chr13:37751094-37751260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
86-255
               

               
Cow position:
               
chr13:43919288-43919459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
92, 83
               

               
Conread position:
               
86-257
               

               
Cow position:
               
chr13:42229282-42229104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
86-260
               

               
Cow position:
               
chr13:6465717-6465882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
86-260
               

               
Cow position:
               
chr13:38012305-38012140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
86-262
               

               
Cow position:
               
chr13:6926490-6926311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
86-262
               

               
Cow position:
               
chr13:11670783-11670605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-262
               

               
Cow position:
               
chr13:58149273-58149101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
128, 54
               

               
Conread position:
               
86-270
               

               
Cow position:
               
chr13:16908190-16908004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-271
               

               
Cow position:
               
chr13:40541132-40541319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-272
               

               
Cow position:
               
chr13:2776261-2776073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
86-272
               

               
Cow position:
               
chr13:14035022-14035210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-273
               

               
Cow position:
               
chr13:8699764-8699955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr13:6980892-6980712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr13:11434602-11434787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
128, 75
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr13:17437883-17438075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr13:20042292-20042477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr13:24215700-24215890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 103
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr13:25978220-25978407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
87, 54
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr13:30711198-30711007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr13:45499202-45499018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr13:45593890-45593710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr13:47340291-47340112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 58
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr13:50622839-50623024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 116
               

               
Conread position:
               
86-275
               

               
Cow position:
               
chr13:21235698-21235882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
86-276
               

               
Cow position:
               
chr13:10989101-10989290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
86-276
               

               
Cow position:
               
chr13:11410687-11410493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
58, 107
               

               
Conread position:
               
86-276
               

               
Cow position:
               
chr13:22345304-22345490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
145, 23
               

               
Conread position:
               
86-276
               

               
Cow position:
               
chr13:24369554-24369371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
86-276
               

               
Cow position:
               
chr13:26698527-26698712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
86-276
               

               
Cow position:
               
chr13:49356076-49356264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
100, 122
               

               
Conread position:
               
86-278
               

               
Cow position:
               
chr13:3149460-3149651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
186, 9
               

               
Conread position:
               
86-278
               

               
Cow position:
               
chr13:4790144-4790341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
86-278
               

               
Cow position:
               
chr13:5060720-5060521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
79, 114
               

               
Conread position:
               
86-278
               

               
Cow position:
               
chr13:15041499-15041692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 98
               

               
Conread position:
               
86-278
               

               
Cow position:
               
chr13:16038313-16038502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
186, 70
               

               
Conread position:
               
86-278
               

               
Cow position:
               
chr13:18058277-18058464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
86-278
               

               
Cow position:
               
chr13:21246736-21246931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-278
               

               
Cow position:
               
chr13:25941290-25941480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
128, 84
               

               
Conread position:
               
86-278
               

               
Cow position:
               
chr13:30396680-30396500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
128, 51
               

               
Conread position:
               
86-278
               

               
Cow position:
               
chr13:54582845-54582657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
86-279
               

               
Cow position:
               
chr13:1539214-1539018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
86-279
               

               
Cow position:
               
chr13:10727337-10727140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
86-279
               

               
Cow position:
               
chr13:13775270-13775471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
86-279
               

               
Cow position:
               
chr13:37030315-37030130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
128, 77
               

               
Conread position:
               
86-279
               

               
Cow position:
               
chr13:37517204-37517406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
107, 77
               

               
Conread position:
               
86-279
               

               
Cow position:
               
chr13:55765205-55765395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr13:5279225-5279428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr13:7059435-7059238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr13:10522907-10522719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
190, 23
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr13:16163555-16163374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr13:17836966-17837157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
186, 114
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr13:19023875-19024072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr13:26726633-26726829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr13:30315480-30315280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr13:35659732-35659535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr13:43787864-43788067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr13:43839703-43839906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr13:53865609-53865416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
119, 157
               

               
Conread position:
               
86-281
               

               
Cow position:
               
chr13:1155731-1155926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
128, 18
               

               
Conread position:
               
86-281
               

               
Cow position:
               
chr13:10924948-10925144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
128, 71
               

               
Conread position:
               
86-281
               

               
Cow position:
               
chr13:12768946-12769144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
86-281
               

               
Cow position:
               
chr13:15162662-15162857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
128, 18
               

               
Conread position:
               
86-281
               

               
Cow position:
               
chr13:17845461-17845263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-281
               

               
Cow position:
               
chr13:43183222-43183023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
86-281
               

               
Cow position:
               
chr13:44278321-44278126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
128, 169
               

               
Conread position:
               
86-281
               

               
Cow position:
               
chr13:48222575-48222770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
128, 145
               

               
Conread position:
               
86-281
               

               
Cow position:
               
chr13:57985965-57986154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
86-282
               

               
Cow position:
               
chr13:3153723-3153525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
128, 102
               

               
Conread position:
               
86-282
               

               
Cow position:
               
chr13:9142252-9142053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
86-282
               

               
Cow position:
               
chr13:17813444-17813250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
86-282
               

               
Cow position:
               
chr13:20520034-20519847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
186, 107
               

               
Conread position:
               
86-282
               

               
Cow position:
               
chr13:20844893-20845091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
86-282
               

               
Cow position:
               
chr13:21277494-21277678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
86-282
               

               
Cow position:
               
chr13:27027925-27028127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
86-282
               

               
Cow position:
               
chr13:28439382-28439195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
86-282
               

               
Cow position:
               
chr13:54627461-54627260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
105, 59
               

               
Conread position:
               
86-282
               

               
Cow position:
               
chr13:57002699-57002500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
86-283
               

               
Cow position:
               
chr13:6486278-6486478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
86-286
               

               
Cow position:
               
chr13:55674235-55674438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
128, 108
               

               
Conread position:
               
86-289
               

               
Cow position:
               
chr13:20314649-20314853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 129
               

               
Conread position:
               
86-290
               

               
Cow position:
               
chr13:7046844-7046652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
31, 108
               

               
Conread position:
               
86-290
               

               
Cow position:
               
chr13:42302067-42302272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
86-291
               

               
Cow position:
               
chr13:41157378-41157167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
86-292
               

               
Cow position:
               
chr13:16003528-16003737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-292
               

               
Cow position:
               
chr13:24753860-24753664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
86-294
               

               
Cow position:
               
chr13:41190078-41189867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-294
               

               
Cow position:
               
chr13:53850797-53850587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-295
               

               
Cow position:
               
chr13:15993359-15993148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
128, 54
               

               
Conread position:
               
86-296
               

               
Cow position:
               
chr13:52934400-52934194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 84
               

               
Conread position:
               
86-300
               

               
Cow position:
               
chr13:55081115-55080899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
128, 95
               

               
Conread position:
               
86-301
               

               
Cow position:
               
chr13:10511728-10511946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 205
               

               
Conread position:
               
86-301
               

               
Cow position:
               
chr13:11147030-11146813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-301
               

               
Cow position:
               
chr13:20110582-20110365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
128, 46
               

               
Conread position:
               
86-301
               

               
Cow position:
               
chr13:39232852-39233068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
128, 79
               

               
Conread position:
               
86-305
               

               
Cow position:
               
chr13:13338829-13338613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
187, 116
               

               
Conread position:
               
86-310
               

               
Cow position:
               
chr13:18127639-18127856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
128, 23
               

               
Conread position:
               
86-311
               

               
Cow position:
               
chr13:11103226-11103455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 197
               

               
Conread position:
               
86-316
               

               
Cow position:
               
chr13:12923847-12923618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
128, 23
               

               
Conread position:
               
86-320
               

               
Cow position:
               
chr13:18877179-18876944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
128, 221
               

               
Conread position:
               
86-320
               

               
Cow position:
               
chr13:46516034-46515803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
97, 160
               

               
Conread position:
               
86-320
               

               
Cow position:
               
chr13:51940707-51940486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
187, 103
               

               
Conread position:
               
86-325
               

               
Cow position:
               
chr13:23975194-23975433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
128, 54
               

               
Conread position:
               
86-332
               

               
Cow position:
               
chr13:23141846-23141590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-332
               

               
Cow position:
               
chr13:30148590-30148823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
86-333
               

               
Cow position:
               
chr13:49823996-49823750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
86-337
               

               
Cow position:
               
chr13:47675962-47676214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
130, 104
               

               
Conread position:
               
86-340
               

               
Cow position:
               
chr13:37985771-37986027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
128, 204
               

               
Conread position:
               
87-206
               

               
Cow position:
               
chr13:12546936-12547055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
87-260
               

               
Cow position:
               
chr13:19778881-19779054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
87-263
               

               
Cow position:
               
chr13:20288307-20288136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
87-265
               

               
Cow position:
               
chr13:12185634-12185813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
89, 80
               

               
Conread position:
               
87-270
               

               
Cow position:
               
chr13:19022243-19022055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
87-272
               

               
Cow position:
               
chr13:20115220-20115033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
87-273
               

               
Cow position:
               
chr13:21242112-21242288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
87-274
               

               
Cow position:
               
chr13:8637670-8637481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
87-274
               

               
Cow position:
               
chr13:9975102-9975281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 115
               

               
Conread position:
               
87-274
               

               
Cow position:
               
chr13:20261358-20261547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
87-274
               

               
Cow position:
               
chr13:21280525-21280714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
87-274
               

               
Cow position:
               
chr13:40154758-40154953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
87-276
               

               
Cow position:
               
chr13:50457830-50457636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
87-278
               

               
Cow position:
               
chr13:23805046-23805240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
127, 6
               

               
Conread position:
               
87-278
               

               
Cow position:
               
chr13:37554902-37555088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
87-278
               

               
Cow position:
               
chr13:41115814-41115622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
127, 50
               

               
Conread position:
               
87-279
               

               
Cow position:
               
chr13:5735347-5735144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
87-279
               

               
Cow position:
               
chr13:20088743-20088937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
87-279
               

               
Cow position:
               
chr13:24230186-24229992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 169
               

               
Conread position:
               
87-281
               

               
Cow position:
               
chr13:6616787-6616984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
87-282
               

               
Cow position:
               
chr13:9707777-9707969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
152, 58
               

               
Conread position:
               
87-282
               

               
Cow position:
               
chr13:34532960-34533150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
87-294
               

               
Cow position:
               
chr13:1231612-1231407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
188, 119
               

               
Conread position:
               
87-305
               

               
Cow position:
               
chr13:45353003-45352780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
87-323
               

               
Cow position:
               
chr13:271044-270805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
88-239
               

               
Cow position:
               
chr13:47227388-47227547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
88-260
               

               
Cow position:
               
chr13:20795238-20795407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
127, 43
               

               
Conread position:
               
88-263
               

               
Cow position:
               
chr13:18999506-18999329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
88-263
               

               
Cow position:
               
chr13:52027166-52027338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
151, 118
               

               
Conread position:
               
88-274
               

               
Cow position:
               
chr13:25520944-25521137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
88-276
               

               
Cow position:
               
chr13:20174712-20174522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
126, 111
               

               
Conread position:
               
88-276
               

               
Cow position:
               
chr13:33256470-33256282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
126, 41
               

               
Conread position:
               
88-278
               

               
Cow position:
               
chr13:52477675-52477862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
88-280
               

               
Cow position:
               
chr13:26093587-26093392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
52, 159
               

               
Conread position:
               
88-280
               

               
Cow position:
               
chr13:28695831-28695638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
126, 91
               

               
Conread position:
               
88-281
               

               
Cow position:
               
chr13:9124895-9124707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
185, 49
               

               
Conread position:
               
88-281
               

               
Cow position:
               
chr13:20535670-20535485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
173, 99
               

               
Conread position:
               
88-281
               

               
Cow position:
               
chr13:28552559-28552365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
126, 77
               

               
Conread position:
               
88-282
               

               
Cow position:
               
chr13:11565808-11565619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
88-293
               

               
Cow position:
               
chr13:369152-369359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
88-294
               

               
Cow position:
               
chr13:25380934-25380709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
88-294
               

               
Cow position:
               
chr13:56034886-56035089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
5, 120
               

               
Conread position:
               
88-295
               

               
Cow position:
               
chr13:52464712-52464501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
126, 54
               

               
Conread position:
               
88-297
               

               
Cow position:
               
chr13:39826528-39826321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
126, 157
               

               
Conread position:
               
88-300
               

               
Cow position:
               
chr13:867094-866892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 119
               

               
Conread position:
               
88-300
               

               
Cow position:
               
chr13:2420619-2420406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 198
               

               
Conread position:
               
88-301
               

               
Cow position:
               
chr13:7104625-7104418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
88-309
               

               
Cow position:
               
chr13:52640977-52641196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
126, 145
               

               
Conread position:
               
88-338
               

               
Cow position:
               
chr13:22122683-22122431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
128, 61
               

               
Conread position:
               
88-338
               

               
Cow position:
               
chr13:24160423-24160172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
128, 61
               

               
Conread position:
               
89-263
               

               
Cow position:
               
chr13:18615354-18615169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
89-266
               

               
Cow position:
               
chr13:4404501-4404329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
89-274
               

               
Cow position:
               
chr13:1363425-1363247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
89-274
               

               
Cow position:
               
chr13:22046038-22046223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 128
               

               
Conread position:
               
89-274
               

               
Cow position:
               
chr13:23685029-23685216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
89-278
               

               
Cow position:
               
chr13:1339171-1339362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
89-279
               

               
Cow position:
               
chr13:27181011-27180818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
89-281
               

               
Cow position:
               
chr13:5277104-5276910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
125, 69
               

               
Conread position:
               
89-281
               

               
Cow position:
               
chr13:39376492-39376297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
89-282
               

               
Cow position:
               
chr13:14796175-14795983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
124, 20
               

               
Conread position:
               
89-311
               

               
Cow position:
               
chr13:4417081-4416858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
125, 69
               

               
Conread position:
               
90-262
               

               
Cow position:
               
chr13:49476047-49475870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
90-263
               

               
Cow position:
               
chr13:16834561-16834738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
90-270
               

               
Cow position:
               
chr13:33854715-33854890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
90-276
               

               
Cow position:
               
chr13:9906702-9906512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 104
               

               
Conread position:
               
90-278
               

               
Cow position:
               
chr13:17994404-17994591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
124, 73
               

               
Conread position:
               
90-278
               

               
Cow position:
               
chr13:19180456-19180647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
90-279
               

               
Cow position:
               
chr13:37775238-37775425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
183, 80
               

               
Conread position:
               
90-280
               

               
Cow position:
               
chr13:48370330-48370519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 152
               

               
Conread position:
               
90-281
               

               
Cow position:
               
chr13:52177570-52177382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
90-282
               

               
Cow position:
               
chr13:5263312-5263502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
182, 116
               

               
Conread position:
               
90-282
               

               
Cow position:
               
chr13:37344767-37344572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
90-284
               

               
Cow position:
               
chr13:34261200-34261011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
181, 103
               

               
Conread position:
               
91-211
               

               
Cow position:
               
chr13:15808734-15808616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
91-253
               

               
Cow position:
               
chr13:1037607-1037445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
123, 102
               

               
Conread position:
               
91-270
               

               
Cow position:
               
chr13:5092426-5092604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
91-274
               

               
Cow position:
               
chr13:6663783-6663969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
91-274
               

               
Cow position:
               
chr13:14411863-14411678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
91-274
               

               
Cow position:
               
chr13:29802583-29802414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
91-276
               

               
Cow position:
               
chr13:8537790-8537603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
91-278
               

               
Cow position:
               
chr13:20367911-20368101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
91-280
               

               
Cow position:
               
chr13:24796846-24796663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
74, 67
               

               
Conread position:
               
91-280
               

               
Cow position:
               
chr13:47538191-47538369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
91-282
               

               
Cow position:
               
chr13:50715117-50714925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
91-291
               

               
Cow position:
               
chr13:11543537-11543329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
91-294
               

               
Cow position:
               
chr13:1363664-1363451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
92-274
               

               
Cow position:
               
chr13:24107581-24107759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
92-274
               

               
Cow position:
               
chr13:26709817-26709635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
122, 31
               

               
Conread position:
               
92-278
               

               
Cow position:
               
chr13:6189633-6189817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
92-280
               

               
Cow position:
               
chr13:6848893-6848704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
92-281
               

               
Cow position:
               
chr13:7716719-7716911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
93-263
               

               
Cow position:
               
chr13:16525257-16525430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
93-270
               

               
Cow position:
               
chr13:17135247-17135424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
71, 151
               

               
Conread position:
               
93-270
               

               
Cow position:
               
chr13:19434404-19434583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
93-274
               

               
Cow position:
               
chr13:48127074-48126891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
93-279
               

               
Cow position:
               
chr13:20214402-20214215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
94-274
               

               
Cow position:
               
chr13:28376595-28376775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
120, 96
               

               
Conread position:
               
94-274
               

               
Cow position:
               
chr13:54127866-54128044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
94-281
               

               
Cow position:
               
chr13:62251879-62252066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
120, 95
               

               
Conread position:
               
94-308
               

               
Cow position:
               
chr13:13781145-13780930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
94-309
               

               
Cow position:
               
chr13:20156144-20155928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
120, 212
               

               
Conread position:
               
95-262
               

               
Cow position:
               
chr13:57446157-57446314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
97-237
               

               
Cow position:
               
chr13:20875955-20876095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
117, 95
               

               
Conread position:
               
97-274
               

               
Cow position:
               
chr13:48373356-48373529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
97-282
               

               
Cow position:
               
chr13:8367677-8367497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
97-284
               

               
Cow position:
               
chr13:16476819-16476629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
97-292
               

               
Cow position:
               
chr13:19178140-19177938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
97-292
               

               
Cow position:
               
chr13:33517994-33518191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
97-294
               

               
Cow position:
               
chr13:20789548-20789753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 99
               

               
Conread position:
               
97-294
               

               
Cow position:
               
chr13:28605428-28605628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
97-294
               

               
Cow position:
               
chr13:46349942-46350141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
97-295
               

               
Cow position:
               
chr13:26316924-26317127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
97-303
               

               
Cow position:
               
chr13:53357795-53357586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
98-229
               

               
Cow position:
               
chr13:37980796-37980927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
115, 90
               

               
Conread position:
               
98-248
               

               
Cow position:
               
chr13:13932210-13932362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
98-274
               

               
Cow position:
               
chr13:2776820-2776643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
116, 28
               

               
Conread position:
               
98-274
               

               
Cow position:
               
chr13:38334915-38335092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
116, 90
               

               
Conread position:
               
98-280
               

               
Cow position:
               
chr13:16718387-16718575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
98-281
               

               
Cow position:
               
chr13:8195060-8194875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
98-294
               

               
Cow position:
               
chr13:40483020-40483214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
116, 13
               

               
Conread position:
               
98-305
               

               
Cow position:
               
chr13:32186241-32186024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
94, 198
               

               
Conread position:
               
99-264
               

               
Cow position:
               
chr13:35557151-35557314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
100-264
               

               
Cow position:
               
chr13:9492730-9492573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
100-276
               

               
Cow position:
               
chr13:16711308-16711131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
114, 83
               

               
Conread position:
               
100-279
               

               
Cow position:
               
chr13:55775319-55775145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
161, 40
               

               
Conread position:
               
100-282
               

               
Cow position:
               
chr13:14544094-14543914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
114, 143
               

               
Conread position:
               
101-276
               

               
Cow position:
               
chr13:10279882-10279707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
112, 16
               

               
Conread position:
               
101-280
               

               
Cow position:
               
chr13:28536359-28536541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
101-298
               

               
Cow position:
               
chr13:43576972-43576773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
113, 189
               

               
Conread position:
               
102-260
               

               
Cow position:
               
chr13:24155471-24155311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
102-282
               

               
Cow position:
               
chr13:17624279-17624095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
113, 63
               

               
Conread position:
               
103-278
               

               
Cow position:
               
chr13:28081678-28081499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
103-282
               

               
Cow position:
               
chr13:14351538-14351361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
111, 40
               

               
Conread position:
               
104-262
               

               
Cow position:
               
chr13:26109957-26109796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
104, 13
               

               
Conread position:
               
104-280
               

               
Cow position:
               
chr13:37946434-37946606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
173, 84
               

               
Conread position:
               
104-280
               

               
Cow position:
               
chr13:50768554-50768371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
105-279
               

               
Cow position:
               
chr13:41979191-41979355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
105-281
               

               
Cow position:
               
chr13:27871727-27871550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 81
               

               
Conread position:
               
105-288
               

               
Cow position:
               
chr13:5175551-5175372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
106-272
               

               
Cow position:
               
chr13:46298803-46298965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 93
               

               
Conread position:
               
106-275
               

               
Cow position:
               
chr13:42614037-42613877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
108, 87
               

               
Conread position:
               
106-275
               

               
Cow position:
               
chr13:53619957-53619786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
106-280
               

               
Cow position:
               
chr13:54236760-54236589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
106-282
               

               
Cow position:
               
chr13:27198861-27198693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
106-297
               

               
Cow position:
               
chr13:43811893-43811693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
64, 56
               

               
Conread position:
               
108-281
               

               
Cow position:
               
chr13:9327136-9327312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 93
               

               
Conread position:
               
109-282
               

               
Cow position:
               
chr13:22729452-22729627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
110-281
               

               
Cow position:
               
chr13:21009788-21009605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
110-284
               

               
Cow position:
               
chr13:29665970-29665792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
111-274
               

               
Cow position:
               
chr13:21955117-21955283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
111-282
               

               
Cow position:
               
chr13:43342516-43342346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 59
               

               
Conread position:
               
111-293
               

               
Cow position:
               
chr13:19588820-19588636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
112-281
               

               
Cow position:
               
chr13:1347219-1347389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 79
               

               
Conread position:
               
112-282
               

               
Cow position:
               
chr13:10986554-10986730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
112-288
               

               
Cow position:
               
chr13:32914309-32914489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
113-269
               

               
Cow position:
               
chr13:8682401-8682243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
113-274
               

               
Cow position:
               
chr13:56019048-56019210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
113-276
               

               
Cow position:
               
chr13:23399712-23399551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
113-280
               

               
Cow position:
               
chr13:51198757-51198589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
113-281
               

               
Cow position:
               
chr13:6377653-6377482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
113-281
               

               
Cow position:
               
chr13:9551307-9551142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
160, 93
               

               
Conread position:
               
113-282
               

               
Cow position:
               
chr13:20520261-20520088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
113-282
               

               
Cow position:
               
chr13:26377470-26377643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr13:5659821-5659995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
113-314
               

               
Cow position:
               
chr13:21194840-21195039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
162, 93
               

               
Conread position:
               
114-274
               

               
Cow position:
               
chr13:56431880-56432034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
114-276
               

               
Cow position:
               
chr13:31398404-31398242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
100, 51
               

               
Conread position:
               
114-278
               

               
Cow position:
               
chr13:17044574-17044407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
114-278
               

               
Cow position:
               
chr13:23478847-23478683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
114-281
               

               
Cow position:
               
chr13:9108730-9108893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
157, 65
               

               
Conread position:
               
114-282
               

               
Cow position:
               
chr13:46391300-46391133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
100, 119
               

               
Conread position:
               
114-293
               

               
Cow position:
               
chr13:28587797-28587978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
116-293
               

               
Cow position:
               
chr13:13504324-13504502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
98, 173
               

               
Conread position:
               
117-276
               

               
Cow position:
               
chr13:26957254-26957093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
117-281
               

               
Cow position:
               
chr13:53847179-53847340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
156, 89
               

               
Conread position:
               
117-282
               

               
Cow position:
               
chr13:14940743-14940576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
117-296
               

               
Cow position:
               
chr13:17787681-17787863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
118-291
               

               
Cow position:
               
chr13:14782283-14782118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
118-303
               

               
Cow position:
               
chr13:21886736-21886925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
120-281
               

               
Cow position:
               
chr13:11439088-11439244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
121-277
               

               
Cow position:
               
chr13:10055359-10055200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
121-282
               

               
Cow position:
               
chr13:7097524-7097366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
121-294
               

               
Cow position:
               
chr13:25313211-25313380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
121-299
               

               
Cow position:
               
chr13:20854518-20854694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
122-280
               

               
Cow position:
               
chr13:38396094-38395935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
92, 69
               

               
Conread position:
               
122-308
               

               
Cow position:
               
chr13:43102920-43102733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
93, 34
               

               
Conread position:
               
124-302
               

               
Cow position:
               
chr13:3387853-3388030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 154
               

               
Conread position:
               
125-274
               

               
Cow position:
               
chr13:2529016-2529165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
89, 58
               

               
Conread position:
               
125-282
               

               
Cow position:
               
chr13:15869048-15868888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
125-333
               

               
Cow position:
               
chr13:18814678-18814464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 202
               

               
Conread position:
               
126-274
               

               
Cow position:
               
chr13:15114404-15114254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
126-341
               

               
Cow position:
               
chr13:242568-242352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
87, 172
               

               
Conread position:
               
129-274
               

               
Cow position:
               
chr13:29805087-29805226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
129-274
               

               
Cow position:
               
chr13:55007842-55007983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
129-294
               

               
Cow position:
               
chr13:55327371-55327206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
133-274
               

               
Cow position:
               
chr13:19308647-19308789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
81, 99
               

               
Conread position:
               
134-260
               

               
Cow position:
               
chr13:8423330-8423202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
134-262
               

               
Cow position:
               
chr13:21070934-21070804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
134-272
               

               
Cow position:
               
chr13:24591522-24591383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
80, 54
               

               
Conread position:
               
134-274
               

               
Cow position:
               
chr13:39775559-39775703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
134-283
               

               
Cow position:
               
chr13:29507542-29507387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
134-296
               

               
Cow position:
               
chr13:9702385-9702218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
134-296
               

               
Cow position:
               
chr13:24759406-24759582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
134-317
               

               
Cow position:
               
chr13:8230080-8229895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 55
               

               
Conread position:
               
135-278
               

               
Cow position:
               
chr13:24292738-24292877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 6
               

               
Conread position:
               
135-303
               

               
Cow position:
               
chr13:6997078-6996913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
6, 53
               

               
Conread position:
               
135-322
               

               
Cow position:
               
chr13:45439455-45439270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
136, 56
               

               
Conread position:
               
136-280
               

               
Cow position:
               
chr13:27146747-27146599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
139-292
               

               
Cow position:
               
chr13:9587661-9587814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 114
               

               
Conread position:
               
140-282
               

               
Cow position:
               
chr13:19182751-19182892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
132, 50
               

               
Conread position:
               
140-296
               

               
Cow position:
               
chr13:23680731-23680573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
142-260
               

               
Cow position:
               
chr13:20090451-20090566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
142-274
               

               
Cow position:
               
chr13:27230385-27230511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
143-274
               

               
Cow position:
               
chr13:52929351-52929218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
143-278
               

               
Cow position:
               
chr13:43577907-43577769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
149-278
               

               
Cow position:
               
chr13:34606603-34606471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
153-281
               

               
Cow position:
               
chr13:1643977-1644112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
154-276
               

               
Cow position:
               
chr13:6820074-6819950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
154-277
               

               
Cow position:
               
chr13:30809468-30809591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
154-280
               

               
Cow position:
               
chr13:21012874-21012744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
156-274
               

               
Cow position:
               
chr13:18875039-18874919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
156-302
               

               
Cow position:
               
chr13:49795945-49795798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 122
               

               
Conread position:
               
160-331
               

               
Cow position:
               
chr13:17619494-17619323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
112, 145
               

               
Conread position:
               
164-282
               

               
Cow position:
               
chr13:60628822-60628706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
167-279
               

               
Cow position:
               
chr13:4622209-4622095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
170-274
               

               
Cow position:
               
chr13:26482890-26482996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
174-303
               

               
Cow position:
               
chr13:14383965-14383834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 116
               

               
Conread position:
               
178-303
               

               
Cow position:
               
chr13:20653977-20654105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
183-304
               

               
Cow position:
               
chr13:8482037-8481915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
184-328
               

               
Cow position:
               
chr13:46143273-46143128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 103
               

               
Conread position:
               
193-292
               

               
Cow position:
               
chr13:54690236-54690135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               
Show alignments to all cow chromosomes.