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Cow genome map

           
Conread name:
           
Emb1-C0005217_D13
        

               
Conread position:
               
1-259
               

               
Cow position:
               
chr28:18370083-18369824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr28:5224633-5224914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr28:34878045-34877750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr28:25249279-25249487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr28:11559708-11559453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr28:17071259-17071532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr28:21363671-21363932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr28:4045778-4046037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
107, 29
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr28:21868381-21868662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr28:9285448-9285171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 205
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr28:3011347-3011058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 129
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr28:28765979-28765693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr28:19222224-19221927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr28:6358486-6358197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr28:3492859-3492567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 212
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr28:4307978-4307629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
27, 302
               

               
Conread position:
               
3-261
               

               
Cow position:
               
chr28:26743550-26743822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr28:3449229-3449521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
26, 6
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr28:7009049-7008777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 195
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr28:20313204-20313416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 50
               

               
Conread position:
               
5-281
               

               
Cow position:
               
chr28:10606699-10606427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
24, 108
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr28:9099863-9100142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
5-327
               

               
Cow position:
               
chr28:7698051-7697721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
5-336
               

               
Cow position:
               
chr28:5144589-5144248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
80, 44
               

               
Conread position:
               
6-305
               

               
Cow position:
               
chr28:11866736-11866431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
6-305
               

               
Cow position:
               
chr28:26982807-26982495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
7-198
               

               
Cow position:
               
chr28:16085255-16085453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
7-209
               

               
Cow position:
               
chr28:22321357-22321556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
7-273
               

               
Cow position:
               
chr28:12672532-12672258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
7-274
               

               
Cow position:
               
chr28:4282559-4282285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
7-280
               

               
Cow position:
               
chr28:10845050-10845314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr28:8347662-8347958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 44
               

               
Conread position:
               
8-272
               

               
Cow position:
               
chr28:24672196-24672470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
14-305
               

               
Cow position:
               
chr28:33322392-33322687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
18-260
               

               
Cow position:
               
chr28:20397428-20397176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
28-234
               

               
Cow position:
               
chr28:25677393-25677180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 186
               

               
Conread position:
               
28-264
               

               
Cow position:
               
chr28:13527150-13527392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
28-270
               

               
Cow position:
               
chr28:5931307-5931544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr28:20759748-20759489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr28:27161374-27161112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr28:34843621-34843368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
28-278
               

               
Cow position:
               
chr28:7619199-7618952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
28-279
               

               
Cow position:
               
chr28:19564278-19564026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 154
               

               
Conread position:
               
28-280
               

               
Cow position:
               
chr28:8358860-8359112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
186, 54
               

               
Conread position:
               
28-282
               

               
Cow position:
               
chr28:25727324-25727580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 217
               

               
Conread position:
               
28-294
               

               
Cow position:
               
chr28:3484531-3484812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 172
               

               
Conread position:
               
28-294
               

               
Cow position:
               
chr28:9812229-9812508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
54, 118
               

               
Conread position:
               
28-332
               

               
Cow position:
               
chr28:12662447-12662129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 39
               

               
Conread position:
               
29-279
               

               
Cow position:
               
chr28:10863832-10863591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
29-282
               

               
Cow position:
               
chr28:1837949-1838208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
29-282
               

               
Cow position:
               
chr28:3726259-3725996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
53, 172
               

               
Conread position:
               
29-282
               

               
Cow position:
               
chr28:10977797-10978050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
29-304
               

               
Cow position:
               
chr28:7557768-7557493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
30-264
               

               
Cow position:
               
chr28:14998020-14998258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 147
               

               
Conread position:
               
32-210
               

               
Cow position:
               
chr28:5867682-5867861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
56, 159
               

               
Conread position:
               
36-335
               

               
Cow position:
               
chr28:2279629-2279338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 12
               

               
Conread position:
               
37-336
               

               
Cow position:
               
chr28:8304212-8304502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
38-282
               

               
Cow position:
               
chr28:118578-118827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
39-282
               

               
Cow position:
               
chr28:13371177-13370927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
44, 53
               

               
Conread position:
               
40-294
               

               
Cow position:
               
chr28:3406447-3406189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
42, 236
               

               
Conread position:
               
43-268
               

               
Cow position:
               
chr28:27721669-27721894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
44-304
               

               
Cow position:
               
chr28:7964700-7964446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
170, 9
               

               
Conread position:
               
49-276
               

               
Cow position:
               
chr28:19262613-19262378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
49-281
               

               
Cow position:
               
chr28:5630070-5630311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 105
               

               
Conread position:
               
49-292
               

               
Cow position:
               
chr28:11197698-11197451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 240
               

               
Conread position:
               
50-270
               

               
Cow position:
               
chr28:19216794-19217012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
50-286
               

               
Cow position:
               
chr28:17739798-17740042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
50-296
               

               
Cow position:
               
chr28:30293615-30293359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
56, 209
               

               
Conread position:
               
52-327
               

               
Cow position:
               
chr28:10495323-10495045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
53-341
               

               
Cow position:
               
chr28:13356391-13356100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
29, 253
               

               
Conread position:
               
54-326
               

               
Cow position:
               
chr28:11759580-11759305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 136
               

               
Conread position:
               
55-303
               

               
Cow position:
               
chr28:11743841-11743595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
57-294
               

               
Cow position:
               
chr28:19015696-19015926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
59-271
               

               
Cow position:
               
chr28:12951405-12951617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 156
               

               
Conread position:
               
65-276
               

               
Cow position:
               
chr28:3746199-3746403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
65-285
               

               
Cow position:
               
chr28:22183145-22182918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
68-276
               

               
Cow position:
               
chr28:15295235-15295444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
153, 133
               

               
Conread position:
               
78-274
               

               
Cow position:
               
chr28:29416707-29416521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
79-274
               

               
Cow position:
               
chr28:13174554-13174350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 137
               

               
Conread position:
               
81-274
               

               
Cow position:
               
chr28:11411521-11411335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
81-283
               

               
Cow position:
               
chr28:10053314-10053119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
15, 113
               

               
Conread position:
               
83-282
               

               
Cow position:
               
chr28:7644754-7644953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
50, 68
               

               
Conread position:
               
84-273
               

               
Cow position:
               
chr28:2821268-2821464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
84-274
               

               
Cow position:
               
chr28:10669599-10669791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
84-280
               

               
Cow position:
               
chr28:5609901-5609707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
189, 6
               

               
Conread position:
               
84-282
               

               
Cow position:
               
chr28:28601144-28601342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
131, 47
               

               
Conread position:
               
84-291
               

               
Cow position:
               
chr28:1655079-1654869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
84-293
               

               
Cow position:
               
chr28:11798764-11798551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
84-296
               

               
Cow position:
               
chr28:18847570-18847786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 197
               

               
Conread position:
               
84-296
               

               
Cow position:
               
chr28:33561380-33561593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
131, 97
               

               
Conread position:
               
84-297
               

               
Cow position:
               
chr28:1383264-1383045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 211
               

               
Conread position:
               
84-333
               

               
Cow position:
               
chr28:5273415-5273160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
85-270
               

               
Cow position:
               
chr28:24082286-24082470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
129, 104
               

               
Conread position:
               
85-274
               

               
Cow position:
               
chr28:5236588-5236391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
85-279
               

               
Cow position:
               
chr28:24966402-24966595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
85-280
               

               
Cow position:
               
chr28:5437069-5436875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
129, 52
               

               
Conread position:
               
85-301
               

               
Cow position:
               
chr28:751243-751462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
129, 55
               

               
Conread position:
               
85-336
               

               
Cow position:
               
chr28:32014800-32015046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
86-202
               

               
Cow position:
               
chr28:17601537-17601421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
86-202
               

               
Cow position:
               
chr28:21355248-21355364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
86-210
               

               
Cow position:
               
chr28:2743098-2743223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
86-251
               

               
Cow position:
               
chr28:4138654-4138486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
86-252
               

               
Cow position:
               
chr28:9384270-9384109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
128, 59
               

               
Conread position:
               
86-258
               

               
Cow position:
               
chr28:12430623-12430795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
128, 29
               

               
Conread position:
               
86-260
               

               
Cow position:
               
chr28:5188412-5188240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 122
               

               
Conread position:
               
86-270
               

               
Cow position:
               
chr28:20968563-20968376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
86-270
               

               
Cow position:
               
chr28:22308658-22308844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-272
               

               
Cow position:
               
chr28:19994929-19994744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
87, 24
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr28:11815061-11814875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 122
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr28:16370066-16369885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr28:23296339-23296523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr28:23460164-23460348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
128, 41
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr28:25973556-25973746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
86-274
               

               
Cow position:
               
chr28:34230245-34230435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
86-276
               

               
Cow position:
               
chr28:2819792-2819971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
86-276
               

               
Cow position:
               
chr28:4185923-4186109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
86-276
               

               
Cow position:
               
chr28:9636440-9636251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
156, 121
               

               
Conread position:
               
86-278
               

               
Cow position:
               
chr28:2825436-2825630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
128, 171
               

               
Conread position:
               
86-278
               

               
Cow position:
               
chr28:4937225-4937030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-278
               

               
Cow position:
               
chr28:7132070-7131883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
86-278
               

               
Cow position:
               
chr28:32593620-32593426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 84
               

               
Conread position:
               
86-279
               

               
Cow position:
               
chr28:4158972-4159173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
86-279
               

               
Cow position:
               
chr28:8259645-8259841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
86-279
               

               
Cow position:
               
chr28:8291445-8291622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
86-279
               

               
Cow position:
               
chr28:11827705-11827900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
128, 23
               

               
Conread position:
               
86-279
               

               
Cow position:
               
chr28:12973898-12974095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr28:3143858-3143672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
184, 23
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr28:4013101-4013293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr28:4881223-4881038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
186, 120
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr28:5552698-5552500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
95, 186
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr28:6563881-6563683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr28:9426333-9426140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
184, 117
               

               
Conread position:
               
86-280
               

               
Cow position:
               
chr28:10480794-10480596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
50, 186
               

               
Conread position:
               
86-281
               

               
Cow position:
               
chr28:14242710-14242908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
79, 109
               

               
Conread position:
               
86-281
               

               
Cow position:
               
chr28:21008648-21008460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
86-281
               

               
Cow position:
               
chr28:22132928-22133120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
186, 35
               

               
Conread position:
               
86-282
               

               
Cow position:
               
chr28:117746-117545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
86-282
               

               
Cow position:
               
chr28:4643753-4643558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-282
               

               
Cow position:
               
chr28:8787557-8787751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
98, 51
               

               
Conread position:
               
86-282
               

               
Cow position:
               
chr28:11398780-11398582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-289
               

               
Cow position:
               
chr28:4182018-4182220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 131
               

               
Conread position:
               
86-291
               

               
Cow position:
               
chr28:17680639-17680846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-292
               

               
Cow position:
               
chr28:27445556-27445354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 121
               

               
Conread position:
               
86-293
               

               
Cow position:
               
chr28:4022690-4022895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
127, 165
               

               
Conread position:
               
86-293
               

               
Cow position:
               
chr28:26530849-26530646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
86-294
               

               
Cow position:
               
chr28:13048267-13048061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
128, 169
               

               
Conread position:
               
86-294
               

               
Cow position:
               
chr28:18797337-18797536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
188, 58
               

               
Conread position:
               
86-295
               

               
Cow position:
               
chr28:659278-659060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
86-295
               

               
Cow position:
               
chr28:27218340-27218550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
128, 44
               

               
Conread position:
               
86-296
               

               
Cow position:
               
chr28:11059517-11059719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
186, 70
               

               
Conread position:
               
86-296
               

               
Cow position:
               
chr28:13133649-13133860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
128, 200
               

               
Conread position:
               
86-296
               

               
Cow position:
               
chr28:20124801-20125006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
86-296
               

               
Cow position:
               
chr28:27313715-27313498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
86-297
               

               
Cow position:
               
chr28:16919151-16918945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
186, 32
               

               
Conread position:
               
86-301
               

               
Cow position:
               
chr28:19128152-19127938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
128, 47
               

               
Conread position:
               
86-302
               

               
Cow position:
               
chr28:3137560-3137785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
86-302
               

               
Cow position:
               
chr28:13245578-13245795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
127, 201
               

               
Conread position:
               
86-304
               

               
Cow position:
               
chr28:10615929-10615711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
190, 120
               

               
Conread position:
               
86-314
               

               
Cow position:
               
chr28:5673892-5674114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
84, 113
               

               
Conread position:
               
86-316
               

               
Cow position:
               
chr28:26810696-26810930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
86-318
               

               
Cow position:
               
chr28:11307501-11307268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
92, 156
               

               
Conread position:
               
86-325
               

               
Cow position:
               
chr28:22307026-22307262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
86-326
               

               
Cow position:
               
chr28:7350671-7350904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
86-345
               

               
Cow position:
               
chr28:15362596-15362851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
89, 122
               

               
Conread position:
               
87-270
               

               
Cow position:
               
chr28:7014471-7014654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
87-272
               

               
Cow position:
               
chr28:8716370-8716178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
87-274
               

               
Cow position:
               
chr28:5235899-5236078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
127, 78
               

               
Conread position:
               
87-274
               

               
Cow position:
               
chr28:10767395-10767587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
87-274
               

               
Cow position:
               
chr28:11346469-11346285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 120
               

               
Conread position:
               
87-275
               

               
Cow position:
               
chr28:33884420-33884608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
134, 58
               

               
Conread position:
               
87-276
               

               
Cow position:
               
chr28:6935161-6934970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
87-276
               

               
Cow position:
               
chr28:7413677-7413870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
87-278
               

               
Cow position:
               
chr28:10196847-10196661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
185, 96
               

               
Conread position:
               
87-278
               

               
Cow position:
               
chr28:18474665-18474860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
124, 54
               

               
Conread position:
               
87-278
               

               
Cow position:
               
chr28:23728281-23728101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
127, 33
               

               
Conread position:
               
87-278
               

               
Cow position:
               
chr28:32358125-32358312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
87-279
               

               
Cow position:
               
chr28:5441879-5441688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
119, 36
               

               
Conread position:
               
87-281
               

               
Cow position:
               
chr28:20173857-20174049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 75
               

               
Conread position:
               
87-282
               

               
Cow position:
               
chr28:9109234-9109422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 83
               

               
Conread position:
               
87-288
               

               
Cow position:
               
chr28:24996595-24996402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
151, 82
               

               
Conread position:
               
87-301
               

               
Cow position:
               
chr28:17949095-17948884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
190, 106
               

               
Conread position:
               
87-301
               

               
Cow position:
               
chr28:20046571-20046773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
87-336
               

               
Cow position:
               
chr28:3423795-3424040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
127, 96
               

               
Conread position:
               
88-262
               

               
Cow position:
               
chr28:11451473-11451313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
88-262
               

               
Cow position:
               
chr28:13160527-13160351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr28:19039000-19038818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
88-273
               

               
Cow position:
               
chr28:4073988-4074180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
97, 117
               

               
Conread position:
               
88-274
               

               
Cow position:
               
chr28:5231957-5232144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
126, 89
               

               
Conread position:
               
88-274
               

               
Cow position:
               
chr28:24064876-24064688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 21
               

               
Conread position:
               
88-274
               

               
Cow position:
               
chr28:25700844-25700666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
88-276
               

               
Cow position:
               
chr28:22085523-22085338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
182, 118
               

               
Conread position:
               
88-278
               

               
Cow position:
               
chr28:21103806-21103611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
117, 14
               

               
Conread position:
               
88-281
               

               
Cow position:
               
chr28:5817861-5818050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
95, 119
               

               
Conread position:
               
88-286
               

               
Cow position:
               
chr28:6321836-6322035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
127, 68
               

               
Conread position:
               
88-301
               

               
Cow position:
               
chr28:21765974-21766189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 157
               

               
Conread position:
               
89-285
               

               
Cow position:
               
chr28:8898064-8898270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
125, 81
               

               
Conread position:
               
90-262
               

               
Cow position:
               
chr28:18608347-18608173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
90-280
               

               
Cow position:
               
chr28:11562226-11562032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
90-280
               

               
Cow position:
               
chr28:17620339-17620147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
124, 23
               

               
Conread position:
               
90-281
               

               
Cow position:
               
chr28:6283467-6283278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
90-281
               

               
Cow position:
               
chr28:25827710-25827516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
90-282
               

               
Cow position:
               
chr28:11585181-11584997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
90-282
               

               
Cow position:
               
chr28:12598360-12598549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
182, 116
               

               
Conread position:
               
90-282
               

               
Cow position:
               
chr28:19394896-19395077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
180, 20
               

               
Conread position:
               
90-289
               

               
Cow position:
               
chr28:10958823-10959018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
91-276
               

               
Cow position:
               
chr28:7885052-7885240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 111
               

               
Conread position:
               
91-280
               

               
Cow position:
               
chr28:9705675-9705866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
91-282
               

               
Cow position:
               
chr28:18761981-18761796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
123, 57
               

               
Conread position:
               
91-294
               

               
Cow position:
               
chr28:2892274-2892482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
91-316
               

               
Cow position:
               
chr28:3678384-3678607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
200, 98
               

               
Conread position:
               
92-274
               

               
Cow position:
               
chr28:26820256-26820072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
119, 45
               

               
Conread position:
               
92-282
               

               
Cow position:
               
chr28:8681405-8681225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
92-292
               

               
Cow position:
               
chr28:5199847-5200050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
93-278
               

               
Cow position:
               
chr28:29989086-29988900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
121, 86
               

               
Conread position:
               
93-282
               

               
Cow position:
               
chr28:4870781-4870584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
93-331
               

               
Cow position:
               
chr28:26826243-26826496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
94-275
               

               
Cow position:
               
chr28:10252892-10252710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
120, 94
               

               
Conread position:
               
94-281
               

               
Cow position:
               
chr28:3445456-3445268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
96-295
               

               
Cow position:
               
chr28:21744742-21744939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
180, 110
               

               
Conread position:
               
97-276
               

               
Cow position:
               
chr28:16857075-16856900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
117, 13
               

               
Conread position:
               
97-294
               

               
Cow position:
               
chr28:20281786-20281973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
188, 48
               

               
Conread position:
               
97-305
               

               
Cow position:
               
chr28:2077528-2077737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
98-230
               

               
Cow position:
               
chr28:8167326-8167193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
98-261
               

               
Cow position:
               
chr28:3729990-3729829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
116, 144
               

               
Conread position:
               
98-282
               

               
Cow position:
               
chr28:28903531-28903345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
116, 95
               

               
Conread position:
               
99-262
               

               
Cow position:
               
chr28:26269416-26269591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
99-278
               

               
Cow position:
               
chr28:4866544-4866370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
99-280
               

               
Cow position:
               
chr28:8936180-8936358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
99-282
               

               
Cow position:
               
chr28:9677699-9677875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
100-258
               

               
Cow position:
               
chr28:19118000-19118160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
101-278
               

               
Cow position:
               
chr28:24698722-24698902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
101-281
               

               
Cow position:
               
chr28:26960877-26960702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
102-294
               

               
Cow position:
               
chr28:4163550-4163355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
103-278
               

               
Cow position:
               
chr28:5254908-5255079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
104-281
               

               
Cow position:
               
chr28:26868116-26867943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
104-296
               

               
Cow position:
               
chr28:8827195-8827389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 175
               

               
Conread position:
               
104-316
               

               
Cow position:
               
chr28:11305598-11305385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
165, 91
               

               
Conread position:
               
105-301
               

               
Cow position:
               
chr28:6301117-6301316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
107-285
               

               
Cow position:
               
chr28:18791077-18791250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
165, 8
               

               
Conread position:
               
111-281
               

               
Cow position:
               
chr28:17738111-17737938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
111-282
               

               
Cow position:
               
chr28:5805709-5805874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
111-282
               

               
Cow position:
               
chr28:16200701-16200526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
111-304
               

               
Cow position:
               
chr28:34830196-34830388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
103, 133
               

               
Conread position:
               
111-319
               

               
Cow position:
               
chr28:29500442-29500656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
112-282
               

               
Cow position:
               
chr28:4077303-4077125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
113-269
               

               
Cow position:
               
chr28:8656122-8655967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
113-273
               

               
Cow position:
               
chr28:30385196-30385358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
113-275
               

               
Cow position:
               
chr28:30922016-30921852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
113-280
               

               
Cow position:
               
chr28:11310056-11309883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 149
               

               
Conread position:
               
113-301
               

               
Cow position:
               
chr28:16252361-16252177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 30
               

               
Conread position:
               
114-293
               

               
Cow position:
               
chr28:21118722-21118906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
118-292
               

               
Cow position:
               
chr28:3494404-3494582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 163
               

               
Conread position:
               
119-282
               

               
Cow position:
               
chr28:17060117-17060273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
120-274
               

               
Cow position:
               
chr28:4588369-4588518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
121-273
               

               
Cow position:
               
chr28:21263209-21263357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
121-275
               

               
Cow position:
               
chr28:24238425-24238279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
121-281
               

               
Cow position:
               
chr28:16159819-16159658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
93, 60
               

               
Conread position:
               
122-278
               

               
Cow position:
               
chr28:14657766-14657925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
124-282
               

               
Cow position:
               
chr28:3311169-3311007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
125-274
               

               
Cow position:
               
chr28:24767460-24767612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 135
               

               
Conread position:
               
129-272
               

               
Cow position:
               
chr28:7523356-7523213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 41
               

               
Conread position:
               
134-278
               

               
Cow position:
               
chr28:12448294-12448427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
135-281
               

               
Cow position:
               
chr28:18740426-18740284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
138, 46
               

               
Conread position:
               
135-282
               

               
Cow position:
               
chr28:22278566-22278413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
135-294
               

               
Cow position:
               
chr28:22170214-22170058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
136-294
               

               
Cow position:
               
chr28:15411747-15411908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
137-276
               

               
Cow position:
               
chr28:8165148-8165006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
137-282
               

               
Cow position:
               
chr28:5428686-5428546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
141-262
               

               
Cow position:
               
chr28:8141727-8141850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 91
               

               
Conread position:
               
144-280
               

               
Cow position:
               
chr28:6124186-6124049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
146-277
               

               
Cow position:
               
chr28:23841417-23841541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
147-274
               

               
Cow position:
               
chr28:16964889-16964760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
165-274
               

               
Cow position:
               
chr28:10896331-10896446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
165-281
               

               
Cow position:
               
chr28:27941687-27941570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 84
               
Show alignments to all cow chromosomes.