Cow genome map
| Conread name: | Emb1-C0005217_F24 |
| Conread position: | 2-299 |
| Cow position: | chr11:260515-260225 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 51 |
| Conread position: | 3-298 |
| Cow position: | chr11:35738711-35738418 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 151, 96 |
| Conread position: | 3-299 |
| Cow position: | chr11:56917377-56917088 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 26, 97 |
| Conread position: | 3-517 |
| Cow position: | chr11:14469157-14469670 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 13-299 |
| Cow position: | chr11:75353833-75354129 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 14-257 |
| Cow position: | chr11:83287088-83286853 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-289 |
| Cow position: | chr11:26534480-26534748 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 207, 84 |
| Conread position: | 14-295 |
| Cow position: | chr11:26785887-26786161 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 138, 89 |
| Conread position: | 14-295 |
| Cow position: | chr11:52846119-52846395 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 103, 84 |
| Conread position: | 14-296 |
| Cow position: | chr11:26068476-26068196 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 140, 34 |
| Conread position: | 14-297 |
| Cow position: | chr11:44516527-44516246 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-297 |
| Cow position: | chr11:63390837-63390556 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-298 |
| Cow position: | chr11:2285355-2285637 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 140, 83 |
| Conread position: | 14-298 |
| Cow position: | chr11:4267511-4267231 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 208, 83 |
| Conread position: | 14-298 |
| Cow position: | chr11:8245807-8246089 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-298 |
| Cow position: | chr11:10958473-10958753 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 138, 85 |
| Conread position: | 14-298 |
| Cow position: | chr11:12177729-12178012 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 135, 85 |
| Conread position: | 14-298 |
| Cow position: | chr11:12317428-12317146 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 140, 83 |
| Conread position: | 14-298 |
| Cow position: | chr11:28125157-28125439 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-298 |
| Cow position: | chr11:30201050-30200769 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 140, 20 |
| Conread position: | 14-298 |
| Cow position: | chr11:33733935-33733654 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 14-298 |
| Cow position: | chr11:41313938-41314220 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-298 |
| Cow position: | chr11:43511329-43511051 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-298 |
| Cow position: | chr11:44154436-44154154 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 140, 86 |
| Conread position: | 14-298 |
| Cow position: | chr11:52462924-52463206 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 138, 34 |
| Conread position: | 14-298 |
| Cow position: | chr11:58050282-58050001 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 140, 60 |
| Conread position: | 14-298 |
| Cow position: | chr11:71332144-71332425 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-298 |
| Cow position: | chr11:73513719-73513448 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 207, 61 |
| Conread position: | 14-299 |
| Cow position: | chr11:2534241-2534524 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-299 |
| Cow position: | chr11:3495685-3495968 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-299 |
| Cow position: | chr11:7121321-7121038 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 140, 99 |
| Conread position: | 14-299 |
| Cow position: | chr11:7680606-7680888 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 14-299 |
| Cow position: | chr11:8444345-8444063 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-299 |
| Cow position: | chr11:9707790-9708073 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 140, 100 |
| Conread position: | 14-299 |
| Cow position: | chr11:10699104-10698821 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-299 |
| Cow position: | chr11:19061432-19061149 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 140, 100 |
| Conread position: | 14-299 |
| Cow position: | chr11:20731580-20731297 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 141, 84 |
| Conread position: | 14-299 |
| Cow position: | chr11:21729373-21729095 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 153, 71 |
| Conread position: | 14-299 |
| Cow position: | chr11:28631175-28631458 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr11:29663407-29663125 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-299 |
| Cow position: | chr11:30929024-30929307 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 140, 100 |
| Conread position: | 14-299 |
| Cow position: | chr11:35542426-35542143 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr11:38574841-38574560 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 209, 85 |
| Conread position: | 14-299 |
| Cow position: | chr11:41261286-41261003 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 140, 100 |
| Conread position: | 14-299 |
| Cow position: | chr11:47973209-47972927 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 140, 46 |
| Conread position: | 14-299 |
| Cow position: | chr11:50511030-50510747 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr11:50834116-50833834 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 140, 22 |
| Conread position: | 14-299 |
| Cow position: | chr11:60223044-60222761 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr11:60757332-60757050 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 138, 84 |
| Conread position: | 14-299 |
| Cow position: | chr11:61397973-61397696 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-299 |
| Cow position: | chr11:61848091-61847808 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 140, 100 |
| Conread position: | 14-299 |
| Cow position: | chr11:63860993-63860718 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 140, 49 |
| Conread position: | 14-299 |
| Cow position: | chr11:64353680-64353397 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-299 |
| Cow position: | chr11:67453297-67453580 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-299 |
| Cow position: | chr11:67920690-67920413 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-299 |
| Cow position: | chr11:73799056-73798773 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-299 |
| Cow position: | chr11:79749240-79748957 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 140, 100 |
| Conread position: | 14-299 |
| Cow position: | chr11:84966756-84967033 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-321 |
| Cow position: | chr11:44515131-44514832 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 140, 84 |
| Conread position: | 14-522 |
| Cow position: | chr11:18920944-18920421 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-524 |
| Cow position: | chr11:4205823-4206351 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 69 |
| Conread position: | 14-524 |
| Cow position: | chr11:11256714-11257225 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 84 |
| Conread position: | 14-524 |
| Cow position: | chr11:33601986-33601460 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-524 |
| Cow position: | chr11:44106318-44106861 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-524 |
| Cow position: | chr11:58139349-58139873 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 14-525 |
| Cow position: | chr11:17105047-17104526 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 85 |
| Conread position: | 15-286 |
| Cow position: | chr11:58805173-58804908 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 141, 65 |
| Conread position: | 15-298 |
| Cow position: | chr11:48168424-48168149 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 139, 82 |
| Conread position: | 15-299 |
| Cow position: | chr11:59871460-59871740 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 33 |
| Conread position: | 16-279 |
| Cow position: | chr11:3229766-3230018 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 205, 31 |
| Conread position: | 16-523 |
| Cow position: | chr11:44233079-44233599 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 72 |
| Conread position: | 18-299 |
| Cow position: | chr11:29614038-29614317 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 134, 79 |
| Conread position: | 18-299 |
| Cow position: | chr11:58136363-58136642 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 136, 81 |
| Conread position: | 20-296 |
| Cow position: | chr11:9387984-9388259 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 134, 78 |
| Conread position: | 20-299 |
| Cow position: | chr11:25809095-25808822 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 134, 78 |
| Conread position: | 21-297 |
| Cow position: | chr11:84773816-84774088 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 133, 59 |
| Conread position: | 21-298 |
| Cow position: | chr11:4024701-4024425 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 133, 75 |
| Conread position: | 30-405 |
| Cow position: | chr11:40134150-40133766 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 263 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 118, 69 |
| Conread position: | 33-298 |
| Cow position: | chr11:7719854-7719591 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 121, 66 |
| Conread position: | 34-298 |
| Cow position: | chr11:19099823-19099561 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 120, 65 |
| Conread position: | 34-299 |
| Cow position: | chr11:22618284-22618021 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 120, 65 |
| Conread position: | 38-299 |
| Cow position: | chr11:32876277-32876018 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 116, 60 |
| Conread position: | 39-299 |
| Cow position: | chr11:49936073-49935823 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 115, 59 |
| Conread position: | 41-520 |
| Cow position: | chr11:40457845-40458351 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 57 |
| Conread position: | 53-299 |
| Cow position: | chr11:17853775-17854019 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 101, 46 |
| Conread position: | 57-299 |
| Cow position: | chr11:10365704-10365471 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 23, 43 |
| Conread position: | 57-299 |
| Cow position: | chr11:67599262-67599504 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 89, 23 |
| Conread position: | 63-297 |
| Cow position: | chr11:42357896-42358125 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 157, 35 |
| Conread position: | 69-299 |
| Cow position: | chr11:32454738-32454979 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 69-515 |
| Cow position: | chr11:19507028-19507495 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 29 |
| Conread position: | 82-299 |
| Cow position: | chr11:26593082-26592852 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 89-299 |
| Cow position: | chr11:10872120-10871900 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 99-299 |
| Cow position: | chr11:57185082-57185290 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 99-406 |
| Cow position: | chr11:24600707-24601040 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 107-298 |
| Cow position: | chr11:30190479-30190678 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 41, 60 |
| Conread position: | 107-299 |
| Cow position: | chr11:30056938-30057132 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 114, 34 |
| Conread position: | 107-299 |
| Cow position: | chr11:48427873-48428069 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 108-299 |
| Cow position: | chr11:417747-417548 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 108-299 |
| Cow position: | chr11:23896246-23896445 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 108-299 |
| Cow position: | chr11:45102763-45102564 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 109-299 |
| Cow position: | chr11:30776690-30776888 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 109-374 |
| Cow position: | chr11:45633371-45633081 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 112-299 |
| Cow position: | chr11:12763463-12763264 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 119-296 |
| Cow position: | chr11:41229262-41229078 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 124-299 |
| Cow position: | chr11:16548208-16548025 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 124-299 |
| Cow position: | chr11:17998189-17998008 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 124-299 |
| Cow position: | chr11:34638762-34638579 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 124-299 |
| Cow position: | chr11:57625447-57625265 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 128-297 |
| Cow position: | chr11:13045010-13044844 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 131, 26 |
| Conread position: | 131-298 |
| Cow position: | chr11:5273825-5273650 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 131-298 |
| Cow position: | chr11:52127958-52128133 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 131-525 |
| Cow position: | chr11:25759502-25759922 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 289 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 23, 354 |
| Conread position: | 166-299 |
| Cow position: | chr11:13062622-13062482 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 189-519 |
| Cow position: | chr11:27667229-27666879 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 70, 33 |
| Conread position: | 258-525 |
| Cow position: | chr11:38097827-38097560 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 140 |
| Conread position: | 301-523 |
| Cow position: | chr11:21471574-21471800 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-523 |
| Cow position: | chr11:58399279-58399504 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 22, 136 |
| Conread position: | 301-524 |
| Cow position: | chr11:30164519-30164750 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 123 |
| Conread position: | 301-524 |
| Cow position: | chr11:42358149-42358370 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 301-524 |
| Cow position: | chr11:73513425-73513194 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 183 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 22, 165 |
| Conread position: | 305-524 |
| Cow position: | chr11:56652290-56652063 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 19, 181 |
| Conread position: | 338-524 |
| Cow position: | chr11:4024362-4024176 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 338-524 |
| Cow position: | chr11:4267166-4266976 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 137 |
| Conread position: | 338-524 |
| Cow position: | chr11:11990986-11991178 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 38, 143 |
| Conread position: | 338-524 |
| Cow position: | chr11:12317081-12316891 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 45, 141 |
| Conread position: | 338-524 |
| Cow position: | chr11:23883336-23883526 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 141 |
| Conread position: | 338-524 |
| Cow position: | chr11:35738355-35738165 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 141 |
| Conread position: | 338-524 |
| Cow position: | chr11:38842615-38842799 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 103 |
| Conread position: | 338-524 |
| Cow position: | chr11:41167705-41167515 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 141 |
| Conread position: | 338-524 |
| Cow position: | chr11:44154094-44153904 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 38, 141 |
| Conread position: | 338-524 |
| Cow position: | chr11:46781080-46780891 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 338-524 |
| Cow position: | chr11:49171509-49171317 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 338-524 |
| Cow position: | chr11:70030408-70030598 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 141 |
| Conread position: | 338-524 |
| Cow position: | chr11:71332491-71332678 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 339-524 |
| Cow position: | chr11:32077793-32077604 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 37, 140 |
| Conread position: | 339-524 |
| Cow position: | chr11:38832489-38832300 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 37, 140 |
| Conread position: | 339-525 |
| Cow position: | chr11:62791885-62792074 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 122 |
| Conread position: | 342-524 |
| Cow position: | chr11:31865631-31865815 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 32, 91 |
| Conread position: | 352-524 |
| Cow position: | chr11:12353889-12353713 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 31, 127 |
| Conread position: | 352-524 |
| Cow position: | chr11:19099482-19099306 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 24, 127 |
| Conread position: | 352-525 |
| Cow position: | chr11:65760603-65760427 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 24, 44 |
Show alignments to all cow chromosomes.