Cow genome map

Conread name: Emb1-C0005217_F24

Conread position: 2-299
Cow position: chr14:19489557-19489851 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 152, 81

Conread position: 3-298
Cow position: chr14:41445581-41445874 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 151, 96

Conread position: 3-299
Cow position: chr14:32499746-32500042 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 16

Conread position: 3-299
Cow position: chr14:45576228-45576516 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 151, 49

Conread position: 13-298
Cow position: chr14:8103082-8102804 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 141, 64

Conread position: 14-280
Cow position: chr14:14082344-14082601 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 84

Conread position: 14-294
Cow position: chr14:8998202-8998480 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 85

Conread position: 14-295
Cow position: chr14:34629615-34629336 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 140, 119

Conread position: 14-296
Cow position: chr14:19325672-19325392 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 140, 85

Conread position: 14-297
Cow position: chr14:19418681-19418962 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 100

Conread position: 14-297
Cow position: chr14:19549782-19550063 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 85

Conread position: 14-297
Cow position: chr14:38435620-38435899 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 140, 73

Conread position: 14-298
Cow position: chr14:12740462-12740180 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position: chr14:12902916-12903203 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 87

Conread position: 14-298
Cow position: chr14:13860954-13860672 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position: chr14:16917139-16916858 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 140, 81

Conread position: 14-298
Cow position: chr14:16997452-16997169 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 140, 100

Conread position: 14-298
Cow position: chr14:17689716-17689997 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 140, 60

Conread position: 14-298
Cow position: chr14:28351111-28350829 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 84

Conread position: 14-298
Cow position: chr14:37226760-37227042 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position: chr14:50144813-50145095 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr14:2288840-2289123 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr14:5644993-5645276 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 82

Conread position: 14-299
Cow position: chr14:9047425-9047708 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr14:9449942-9449662 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position: chr14:9811268-9811551 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position: chr14:9848966-9848685 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 31, 86

Conread position: 14-299
Cow position: chr14:12545251-12545534 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position: chr14:13683153-13683436 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr14:15337046-15336763 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position: chr14:17771596-17771307 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 84

Conread position: 14-299
Cow position: chr14:23254751-23254468 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr14:31882301-31882018 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr14:34167889-34168168 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr14:34394325-34394608 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 141, 82

Conread position: 14-299
Cow position: chr14:38238509-38238226 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr14:38459565-38459284 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 206, 84

Conread position: 14-299
Cow position: chr14:38813128-38812846 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 85

Conread position: 14-299
Cow position: chr14:38915488-38915211 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 208, 7

Conread position: 14-299
Cow position: chr14:40968742-40969025 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr14:44077099-44076815 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 138, 85

Conread position: 14-303
Cow position: chr14:5531927-5532214 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 141, 85

Conread position: 14-524
Cow position: chr14:11474703-11474198 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 85

Conread position: 14-524
Cow position: chr14:21533730-21534258 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 83

Conread position: 14-524
Cow position: chr14:32449556-32450080 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 351
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 140, 85

Conread position: 15-255
Cow position: chr14:17757451-17757220 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 139, 77

Conread position: 15-298
Cow position: chr14:29773548-29773260 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 37

Conread position: 15-298
Cow position: chr14:32584437-32584156 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 139, 99

Conread position: 16-216
Cow position: chr14:37882341-37882532 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 136, 83

Conread position: 16-294
Cow position: chr14:33679638-33679912 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 136, 79

Conread position: 18-299
Cow position: chr14:13237208-13236929 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 136, 80

Conread position: 18-299
Cow position: chr14:29045082-29044803 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 135, 80

Conread position: 19-298
Cow position: chr14:50113959-50114236 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 135, 80

Conread position: 31-299
Cow position: chr14:13369831-13370097 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 123, 67

Conread position: 35-299
Cow position: chr14:46959995-46960257 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 119, 64

Conread position: 36-299
Cow position: chr14:11462471-11462210 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 118, 63

Conread position: 39-298
Cow position: chr14:8397168-8396911 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 115, 60

Conread position: 39-298
Cow position: chr14:9745005-9744748 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 115, 60

Conread position: 40-299
Cow position: chr14:12616638-12616381 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 114, 59

Conread position: 43-296
Cow position: chr14:24922399-24922650 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 109, 56

Conread position: 54-297
Cow position: chr14:35603716-35603950 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 100, 49

Conread position: 57-299
Cow position: chr14:8924726-8924966 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 97, 41

Conread position: 64-299
Cow position: chr14:17488716-17488469 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 83-298
Cow position: chr14:41755693-41755919 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 90-299
Cow position: chr14:12483057-12483271 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 52

Conread position: 92-524
Cow position: chr14:13811382-13810914 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 319
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 16, 417

Conread position: 93-299
Cow position: chr14:28116712-28116931 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 57

Conread position: 101-299
Cow position: chr14:7646783-7646985 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 9

Conread position: 108-299
Cow position: chr14:423858-424055 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 34

Conread position: 108-299
Cow position: chr14:31289530-31289729 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 108-299
Cow position: chr14:35016030-35016229 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 109-298
Cow position: chr14:22690223-22690027 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 191

Conread position: 110-299
Cow position: chr14:30581793-30581596 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 112-298
Cow position: chr14:13581545-13581738 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 124-299
Cow position: chr14:5994306-5994489 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 124-299
Cow position: chr14:31155512-31155695 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 132-299
Cow position: chr14:38651606-38651781 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 141-297
Cow position: chr14:33835306-33835142 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 146-295
Cow position: chr14:39773279-39773437 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 220-523
Cow position: chr14:33713787-33714100 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 226
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 39, 216

Conread position: 301-524
Cow position: chr14:19489873-19490107 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 23, 0

Conread position: 301-525
Cow position: chr14:34354442-34354674 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 139

Conread position: 302-524
Cow position: chr14:33835116-33834886 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 182
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 160

Conread position: 306-525
Cow position: chr14:446372-446160 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 18, 72

Conread position: 315-524
Cow position: chr14:24990368-24990158 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 61, 144

Conread position: 320-523
Cow position: chr14:44772914-44772714 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 173, 48

Conread position: 325-524
Cow position: chr14:28116982-28117181 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 168, 48

Conread position: 337-522
Cow position: chr14:24922719-24922905 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 129, 47

Conread position: 338-524
Cow position: chr14:5379093-5379281 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 102

Conread position: 338-524
Cow position: chr14:11150982-11150792 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 39, 109

Conread position: 338-524
Cow position: chr14:12833784-12833974 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 141

Conread position: 338-524
Cow position: chr14:30476409-30476220 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 38, 97

Conread position: 338-524
Cow position: chr14:34906459-34906649 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 141

Conread position: 338-524
Cow position: chr14:38435965-38436148 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 126

Conread position: 338-524
Cow position: chr14:41220114-41219924 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 38, 141

Conread position: 338-524
Cow position: chr14:44026882-44026692 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 338-525
Cow position: chr14:47873190-47872999 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 141

Conread position: 343-524
Cow position: chr14:38241644-38241456 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 113

Conread position: 351-524
Cow position: chr14:40475774-40475602 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 127, 0

Conread position: 356-524
Cow position: chr14:12243431-12243602 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 35

Conread position: 363-524
Cow position: chr14:48251495-48251332 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 13, 116

Conread position: 381-522
Cow position: chr14:4992181-4992043 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 105, 86

Conread position: 383-524
Cow position: chr14:39773937-39774081 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 78, 99

Conread position: 389-524
Cow position: chr14:2171664-2171802 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 104, 89

Show alignments to all cow chromosomes.