Cow genome map

Conread name: Emb1-C0005217_F24

Conread position: 3-299
Cow position: chr20:825764-826058 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 151, 96

Conread position: 3-299
Cow position: chr20:9410348-9410642 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 47, 96

Conread position: 13-257
Cow position: chr20:14876274-14876512 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 139, 80

Conread position: 14-257
Cow position: chr20:11719773-11720007 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 206, 80

Conread position: 14-257
Cow position: chr20:28294307-28294542 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 140, 83

Conread position: 14-278
Cow position: chr20:27876476-27876732 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 34

Conread position: 14-278
Cow position: chr20:42085528-42085784 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 140, 100

Conread position: 14-294
Cow position: chr20:35108192-35107921 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 140, 100

Conread position: 14-295
Cow position: chr20:27994540-27994251 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 83, 99

Conread position: 14-296
Cow position: chr20:12568321-12568041 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 140, 85

Conread position: 14-297
Cow position: chr20:19425186-19425468 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 18, 82

Conread position: 14-297
Cow position: chr20:30146430-30146711 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 100

Conread position: 14-298
Cow position: chr20:3808774-3808496 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 211
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 32

Conread position: 14-298
Cow position: chr20:13325105-13325387 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position: chr20:13765888-13766169 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 140, 100

Conread position: 14-298
Cow position: chr20:14741181-14741464 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 140, 84

Conread position: 14-298
Cow position: chr20:16106443-16106725 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position: chr20:20731249-20731535 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 140, 101

Conread position: 14-299
Cow position: chr20:753433-753719 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 141, 87

Conread position: 14-299
Cow position: chr20:5086342-5086059 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr20:5503752-5503469 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position: chr20:6135994-6135713 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr20:6259298-6259015 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 138, 84

Conread position: 14-299
Cow position: chr20:8970897-8970615 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 140, 54

Conread position: 14-299
Cow position: chr20:14925647-14925364 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr20:15799965-15799682 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr20:16559546-16559254 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 96, 69

Conread position: 14-299
Cow position: chr20:18092906-18092622 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 103, 84

Conread position: 14-299
Cow position: chr20:18489941-18490227 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 140, 82

Conread position: 14-299
Cow position: chr20:19306390-19306107 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr20:19364877-19364607 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 142, 68

Conread position: 14-299
Cow position: chr20:20092294-20092577 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr20:21719553-21719835 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position: chr20:22048361-22048644 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr20:22061182-22060899 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr20:24542421-24542704 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr20:24568274-24567991 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr20:28247255-28246972 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position: chr20:30578858-30579141 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr20:31504325-31504608 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr20:33597969-33597686 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr20:38957133-38957416 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr20:39234226-39234509 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position: chr20:42923551-42923831 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 140, 85

Conread position: 14-508
Cow position: chr20:34231861-34231355 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 100

Conread position: 14-524
Cow position: chr20:5076986-5077485 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 85

Conread position: 16-299
Cow position: chr20:8445410-8445690 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 138, 82

Conread position: 18-297
Cow position: chr20:7810841-7810564 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 136, 80

Conread position: 18-298
Cow position: chr20:21016016-21015739 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 81

Conread position: 18-299
Cow position: chr20:7512932-7512662 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 130, 81

Conread position: 18-299
Cow position: chr20:10790455-10790734 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 136, 96

Conread position: 22-299
Cow position: chr20:13575702-13575437 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 129, 30

Conread position: 26-299
Cow position: chr20:19440916-19441186 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 128, 39

Conread position: 34-299
Cow position: chr20:774673-774936 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 120, 65

Conread position: 34-299
Cow position: chr20:24904526-24904266 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 118, 14

Conread position: 39-294
Cow position: chr20:15526765-15527018 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 115, 59

Conread position: 39-524
Cow position: chr20:32351622-32352127 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 60

Conread position: 41-298
Cow position: chr20:19018382-19018127 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 111, 56

Conread position: 43-523
Cow position: chr20:28956927-28956420 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 336
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 108, 55

Conread position: 53-298
Cow position: chr20:15295054-15295297 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 101, 47

Conread position: 54-298
Cow position: chr20:6550963-6550721 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 100, 45

Conread position: 82-295
Cow position: chr20:32639062-32639284 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 27, 15

Conread position: 89-299
Cow position: chr20:14745670-14745890 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 89-299
Cow position: chr20:30479167-30479386 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 81

Conread position: 107-299
Cow position: chr20:30737352-30737552 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 107-522
Cow position: chr20:31220377-31220800 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 281
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 115, 255

Conread position: 108-298
Cow position: chr20:11516960-11516764 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 108-299
Cow position: chr20:31157679-31157878 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 108-299
Cow position: chr20:37154888-37154688 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 140-298
Cow position: chr20:26053242-26053076 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 301-524
Cow position: chr20:3782404-3782171 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 184

Conread position: 301-524
Cow position: chr20:27994222-27993993 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 23, 133

Conread position: 323-523
Cow position: chr20:21768285-21768083 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 62, 29

Conread position: 323-524
Cow position: chr20:13654007-13653810 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 170, 57

Conread position: 336-524
Cow position: chr20:40423987-40423797 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 40, 11

Conread position: 337-524
Cow position: chr20:15295359-15295549 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 39, 124

Conread position: 338-522
Cow position: chr20:15068157-15068348 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 112

Conread position: 338-524
Cow position: chr20:5958803-5958613 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 338-524
Cow position: chr20:6550656-6550466 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 141

Conread position: 338-524
Cow position: chr20:7597515-7597330 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 119

Conread position: 338-524
Cow position: chr20:10921583-10921394 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 46

Conread position: 338-524
Cow position: chr20:15090030-15089840 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 141

Conread position: 338-524
Cow position: chr20:17657890-17657700 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 38, 141

Conread position: 338-524
Cow position: chr20:23466307-23466118 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 141

Conread position: 338-524
Cow position: chr20:35037038-35036848 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 141

Conread position: 341-524
Cow position: chr20:13575200-13575017 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 34

Conread position: 347-524
Cow position: chr20:21015642-21015464 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 29, 10

Conread position: 351-524
Cow position: chr20:40781093-40781270 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 364-524
Cow position: chr20:33563785-33563949 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 115

Show alignments to all cow chromosomes.