Cow genome map

Conread name: Emb1-C0005217_F24

Conread position: 3-298
Cow position: chr24:6079433-6079725 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 151, 89

Conread position: 3-298
Cow position: chr24:6412485-6412778 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 151, 96

Conread position: 3-299
Cow position: chr24:14745371-14745665 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 152, 96

Conread position: 9-298
Cow position: chr24:36726168-36726456 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 128, 90

Conread position: 9-299
Cow position: chr24:6326358-6326070 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 145, 89

Conread position: 13-524
Cow position: chr24:14609828-14609322 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 89

Conread position: 14-250
Cow position: chr24:17368919-17368694 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 210, 82

Conread position: 14-257
Cow position: chr24:16562396-16562171 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 140, 22

Conread position: 14-288
Cow position: chr24:145585-145313 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 138, 84

Conread position: 14-294
Cow position: chr24:3850613-3850884 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 85

Conread position: 14-294
Cow position: chr24:24485174-24484901 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 140, 84

Conread position: 14-297
Cow position: chr24:8607347-8607628 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 140, 85

Conread position: 14-297
Cow position: chr24:19185173-19185453 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 66

Conread position: 14-297
Cow position: chr24:41062472-41062752 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 56, 84

Conread position: 14-298
Cow position: chr24:6963868-6964150 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position: chr24:14147145-14146865 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 140, 38

Conread position: 14-298
Cow position: chr24:14352370-14352652 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 145, 85

Conread position: 14-298
Cow position: chr24:16559261-16558979 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 140, 83

Conread position: 14-298
Cow position: chr24:22974825-22975108 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position: chr24:29084647-29084365 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 140, 85

Conread position: 14-298
Cow position: chr24:36721463-36721744 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 138, 84

Conread position: 14-299
Cow position: chr24:1841854-1841571 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr24:3162488-3162771 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr24:6021060-6020777 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr24:7597541-7597258 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr24:9546190-9546473 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr24:11208589-11208306 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr24:14194830-14194548 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr24:14464178-14463897 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 137, 84

Conread position: 14-299
Cow position: chr24:15296133-15296416 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr24:20367385-20367667 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 140, 85

Conread position: 14-299
Cow position: chr24:22794577-22794860 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 140, 84

Conread position: 14-299
Cow position: chr24:31842558-31842841 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 140, 100

Conread position: 14-299
Cow position: chr24:40551643-40551926 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 140, 100

Conread position: 14-475
Cow position: chr24:29181396-29181855 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 28

Conread position: 14-523
Cow position: chr24:15371801-15372326 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 34

Conread position: 14-523
Cow position: chr24:28688458-28688965 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 42

Conread position: 14-524
Cow position: chr24:16266478-16267007 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 87

Conread position: 14-524
Cow position: chr24:31301723-31302238 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 85

Conread position: 14-524
Cow position: chr24:32361833-32361305 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 84

Conread position: 14-524
Cow position: chr24:32824071-32823567 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 60

Conread position: 15-299
Cow position: chr24:24249482-24249201 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 83

Conread position: 16-299
Cow position: chr24:12264768-12264488 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 136, 79

Conread position: 18-289
Cow position: chr24:12578543-12578805 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 136, 81

Conread position: 18-297
Cow position: chr24:5863330-5863054 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 136, 80

Conread position: 18-298
Cow position: chr24:29190311-29190588 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 145, 81

Conread position: 18-298
Cow position: chr24:36779293-36779571 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 136, 81

Conread position: 18-299
Cow position: chr24:31068023-31067744 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 136, 81

Conread position: 31-299
Cow position: chr24:14173731-14173463 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 66

Conread position: 40-299
Cow position: chr24:17105831-17105576 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 184, 58

Conread position: 45-302
Cow position: chr24:6146348-6146597 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 175, 53

Conread position: 53-298
Cow position: chr24:25372160-25372403 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 101, 46

Conread position: 56-299
Cow position: chr24:22953622-22953863 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 58

Conread position: 65-279
Cow position: chr24:30767618-30767846 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 105-298
Cow position: chr24:12199267-12199066 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 106-506
Cow position: chr24:45003526-45003952 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 264

Conread position: 109-299
Cow position: chr24:5928882-5929080 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 109-299
Cow position: chr24:25698048-25698245 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 115-299
Cow position: chr24:29179474-29179667 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 24

Conread position: 119-523
Cow position: chr24:28498020-28497581 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 251

Conread position: 124-299
Cow position: chr24:13235390-13235570 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 99, 41

Conread position: 131-298
Cow position: chr24:8431497-8431672 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 301-523
Cow position: chr24:29179689-29179914 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 185
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 22, 107

Conread position: 301-523
Cow position: chr24:45086846-45087077 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 67

Conread position: 301-524
Cow position: chr24:17105554-17105321 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 85

Conread position: 338-524
Cow position: chr24:11940126-11940316 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 141

Conread position: 338-524
Cow position: chr24:18223116-18222924 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 339-524
Cow position: chr24:9549630-9549817 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 29

Conread position: 339-525
Cow position: chr24:20367732-20367919 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 37, 125

Conread position: 340-524
Cow position: chr24:6035814-6035626 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 36, 139

Conread position: 348-524
Cow position: chr24:17752872-17752691 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 133

Conread position: 369-524
Cow position: chr24:25424086-25424243 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 37

Show alignments to all cow chromosomes.